RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 ZNF358Q9NW07 568 aa5.02□□□□□ -1.61
CBX3P4-201ENST00000538909 PCDHGA11Q9Y5H2 935 aa5.02□□□□□ -1.61
CBX3P4-201ENST00000538909 SERTM1A2A2V5 107 aa5.01□□□□□ -1.61
CBX3P4-201ENST00000538909 MED26O95402 600 aa5.01□□□□□ -1.61
CBX3P4-201ENST00000538909 GP2P55259 537 aaKnown RBP5.01□□□□□ -1.61
CBX3P4-201ENST00000538909 IRF5Q13568 498 aa5.01□□□□□ -1.61
CBX3P4-201ENST00000538909 FBXO11Q86XK2 927 aa5.01□□□□□ -1.61
CBX3P4-201ENST00000538909 TNS4Q8IZW8 715 aa5.01□□□□□ -1.61
CBX3P4-201ENST00000538909 ZNF280CQ8ND82 737 aa5.01□□□□□ -1.61
CBX3P4-201ENST00000538909 HCN4Q9Y3Q4 1203 aa5.01□□□□□ -1.61
CBX3P4-201ENST00000538909 GPC6Q9Y625 555 aaPredicted RBP5.01□□□□□ -1.61
CBX3P4-201ENST00000538909 KCNQ4P56696 695 aa5□□□□□ -1.61
CBX3P4-201ENST00000538909 MSL1Q68DK7 614 aa5□□□□□ -1.61
CBX3P4-201ENST00000538909 ALX3O95076 343 aa4.99□□□□□ -1.61
CBX3P4-201ENST00000538909 CPB1P15086 417 aa4.99□□□□□ -1.61
CBX3P4-201ENST00000538909 GTF2IP78347 998 aa4.99□□□□□ -1.61
CBX3P4-201ENST00000538909 FAM35AQ86V20 835 aa4.99□□□□□ -1.61
CBX3P4-201ENST00000538909 WFDC8Q8IUA0 241 aa4.99□□□□□ -1.61
CBX3P4-201ENST00000538909 SUSD3Q96L08 255 aa4.99□□□□□ -1.61
CBX3P4-201ENST00000538909 PNMA5Q96PV4 448 aa4.99□□□□□ -1.61
CBX3P4-201ENST00000538909 ANKIB1Q9P2G1 1089 aa4.99□□□□□ -1.61
CBX3P4-201ENST00000538909 PIK3CDO00329 1044 aa4.98□□□□□ -1.61
CBX3P4-201ENST00000538909 PTCD1O75127 700 aaKnown RBP4.98□□□□□ -1.61
CBX3P4-201ENST00000538909 TGFB1P01137 390 aa4.98□□□□□ -1.61
CBX3P4-201ENST00000538909 NFKB1P19838 968 aa4.98□□□□□ -1.61
CBX3P4-201ENST00000538909 EPHA4P54764 986 aa4.98□□□□□ -1.61
CBX3P4-201ENST00000538909 PLAURQ03405 335 aa4.98□□□□□ -1.61
CBX3P4-201ENST00000538909 IGF2-ASQ6U949 168 aa4.98□□□□□ -1.61
CBX3P4-201ENST00000538909 ILDR2Q71H61 639 aa4.98□□□□□ -1.61
CBX3P4-201ENST00000538909 DTWD1Q8N5C7 304 aa4.98□□□□□ -1.61
CBX3P4-201ENST00000538909 PHACTR1Q9C0D0 580 aa4.98□□□□□ -1.61
CBX3P4-201ENST00000538909 EML3Q32P44 896 aa4.97□□□□□ -1.61
CBX3P4-201ENST00000538909 AKTIPQ9H8T0 292 aa4.97□□□□□ -1.61
CBX3P4-201ENST00000538909 NOD1Q9Y239 953 aa4.97□□□□□ -1.61
CBX3P4-201ENST00000538909 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.97□□□□□ -1.61
CBX3P4-201ENST00000538909 KIAA1324LA8MWY0 1029 aaPredicted RBP4.96□□□□□ -1.62
CBX3P4-201ENST00000538909 ADAMTS4O75173 837 aa4.96□□□□□ -1.62
CBX3P4-201ENST00000538909 DEAF1O75398 565 aaPredicted RBP4.96□□□□□ -1.62
CBX3P4-201ENST00000538909 MLLT1Q03111 559 aaPredicted RBP4.96□□□□□ -1.62
CBX3P4-201ENST00000538909 SEMA3FQ13275 785 aa4.96□□□□□ -1.62
CBX3P4-201ENST00000538909 GRIK5Q16478 980 aa4.96□□□□□ -1.62
CBX3P4-201ENST00000538909 C1orf53Q5VUE5 145 aa4.96□□□□□ -1.62
CBX3P4-201ENST00000538909 PRM3Q9NNZ6 103 aa4.96□□□□□ -1.62
CBX3P4-201ENST00000538909 SKIP12755 728 aa4.95□□□□□ -1.62
CBX3P4-201ENST00000538909 BRPF1P55201 1214 aaPredicted RBP4.95□□□□□ -1.62
CBX3P4-201ENST00000538909 PSMA6P60900 246 aaKnown RBP4.95□□□□□ -1.62
CBX3P4-201ENST00000538909 PERM1Q5SV97 790 aa4.95□□□□□ -1.62
CBX3P4-201ENST00000538909 ELMSAN1Q6PJG2 1045 aa4.95□□□□□ -1.62
CBX3P4-201ENST00000538909 BTLAQ7Z6A9 289 aa4.95□□□□□ -1.62
CBX3P4-201ENST00000538909 SLC51AQ86UW1 340 aa4.95□□□□□ -1.62
CBX3P4-201ENST00000538909 DZIP1LQ8IYY4 767 aaKnown RBP4.95□□□□□ -1.62
CBX3P4-201ENST00000538909 LPIN3Q9BQK8 851 aa4.95□□□□□ -1.62
CBX3P4-201ENST00000538909 GSX2Q9BZM3 304 aa4.95□□□□□ -1.62
CBX3P4-201ENST00000538909 TSPAN10Q9H1Z9 355 aaPredicted RBP4.95□□□□□ -1.62
CBX3P4-201ENST00000538909 CHMP3Q9Y3E7 222 aa4.95□□□□□ -1.62
CBX3P4-201ENST00000538909 IGLV1-40P01703 118 aa4.94□□□□□ -1.62
CBX3P4-201ENST00000538909 ABL2P42684 1182 aa4.94□□□□□ -1.62
CBX3P4-201ENST00000538909 JAG1P78504 1218 aa4.94□□□□□ -1.62
CBX3P4-201ENST00000538909 F8W735 103 aaPredicted RBP4.93□□□□□ -1.62
CBX3P4-201ENST00000538909 DLL1O00548 723 aa4.93□□□□□ -1.62
CBX3P4-201ENST00000538909 GLB1P16278 677 aa4.93□□□□□ -1.62
CBX3P4-201ENST00000538909 CCINQ13939 588 aa4.93□□□□□ -1.62
CBX3P4-201ENST00000538909 KRT25Q7Z3Z0 450 aa4.93□□□□□ -1.62
CBX3P4-201ENST00000538909 DEPDC4Q8N2C3 294 aa4.93□□□□□ -1.62
CBX3P4-201ENST00000538909 AGGF1Q8N302 714 aaeCLIP4.93□□□□□ -1.62
CBX3P4-201ENST00000538909 KRTAP4-11Q9BYQ6 195 aa4.93□□□□□ -1.62
CBX3P4-201ENST00000538909 GDPD2Q9HCC8 539 aa4.93□□□□□ -1.62
CBX3P4-201ENST00000538909 RAXQ9Y2V3 346 aa4.93□□□□□ -1.62
CBX3P4-201ENST00000538909 NCOA4Q13772 614 aa4.92□□□□□ -1.62
CBX3P4-201ENST00000538909 NEUROD2Q15784 382 aa4.92□□□□□ -1.62
CBX3P4-201ENST00000538909 HFE2Q6ZVN8 426 aa4.92□□□□□ -1.62
CBX3P4-201ENST00000538909 TPCN2Q8NHX9 752 aa4.92□□□□□ -1.62
CBX3P4-201ENST00000538909 NGLY1Q96IV0 654 aa4.92□□□□□ -1.62
CBX3P4-201ENST00000538909 SMG9Q9H0W8 520 aaKnown RBP4.92□□□□□ -1.62
CBX3P4-201ENST00000538909 FRRS1LQ9P0K9 344 aa4.92□□□□□ -1.62
CBX3P4-201ENST00000538909 STOML1Q9UBI4 398 aa4.92□□□□□ -1.62
CBX3P4-201ENST00000538909 ZBTB42B2RXF5 422 aa4.91□□□□□ -1.62
CBX3P4-201ENST00000538909 GSC2O15499 205 aa4.91□□□□□ -1.62
CBX3P4-201ENST00000538909 PPP1R12BO60237 982 aaPredicted RBP4.91□□□□□ -1.62
CBX3P4-201ENST00000538909 SPINK2P20155 84 aa4.91□□□□□ -1.62
CBX3P4-201ENST00000538909 HIRAP54198 1017 aaPredicted RBP4.91□□□□□ -1.62
CBX3P4-201ENST00000538909 ZDHHC13Q8IUH4 622 aa4.91□□□□□ -1.62
CBX3P4-201ENST00000538909 ALDH16A1Q8IZ83 802 aa4.91□□□□□ -1.62
CBX3P4-201ENST00000538909 MRPL18Q9H0U6 180 aaKnown RBP4.91□□□□□ -1.62
CBX3P4-201ENST00000538909 EFCC1Q9HA90 598 aa4.91□□□□□ -1.62
CBX3P4-201ENST00000538909 GRIK1P39086 918 aa4.9□□□□□ -1.63
CBX3P4-201ENST00000538909 PCSK7Q16549 785 aa4.9□□□□□ -1.63
CBX3P4-201ENST00000538909 DHX32Q7L7V1 743 aaKnown RBP4.9□□□□□ -1.63
CBX3P4-201ENST00000538909 KRTAP4-5Q9BYR2 181 aa4.9□□□□□ -1.63
CBX3P4-201ENST00000538909 KIAA1024Q9UPX6 916 aa4.9□□□□□ -1.63
CBX3P4-201ENST00000538909 EIF2AK2P19525 551 aaKnown RBP4.89□□□□□ -1.63
CBX3P4-201ENST00000538909 WASHC4Q2M389 1173 aa4.89□□□□□ -1.63
CBX3P4-201ENST00000538909 GDF6Q6KF10 455 aaPredicted RBP4.89□□□□□ -1.63
CBX3P4-201ENST00000538909 OGFOD2Q6N063 350 aa4.89□□□□□ -1.63
CBX3P4-201ENST00000538909 TMEM130Q8N3G9 435 aa4.89□□□□□ -1.63
CBX3P4-201ENST00000538909 UBL7Q96S82 380 aaPredicted RBP4.89□□□□□ -1.63
CBX3P4-201ENST00000538909 ZFATQ9P243 1243 aa4.89□□□□□ -1.63
CBX3P4-201ENST00000538909 DHX15O43143 795 aaKnown RBP4.88□□□□□ -1.63
CBX3P4-201ENST00000538909 WNT11O96014 354 aa4.88□□□□□ -1.63
CBX3P4-201ENST00000538909 TARSP26639 723 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms