RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 CCDC144CPQ8IYA2 1237 aa19.38■□□□□ 0.69
SCARB1-205ENST00000538291 ZGPATQ8N5A5 531 aaKnown RBP19.38■□□□□ 0.69
SCARB1-205ENST00000538291 NEK1Q96PY6 1258 aa19.38■□□□□ 0.69
SCARB1-205ENST00000538291 UQCRHLA0A096LP55 91 aa19.38■□□□□ 0.69
SCARB1-205ENST00000538291 UQCRHP07919 91 aa19.38■□□□□ 0.69
SCARB1-205ENST00000538291 MAP9Q49MG5 647 aa19.38■□□□□ 0.69
SCARB1-205ENST00000538291 SETDB2Q96T68 719 aa19.38■□□□□ 0.69
SCARB1-205ENST00000538291 CCDC113Q9H0I3 377 aa19.38■□□□□ 0.69
SCARB1-205ENST00000538291 SCAF11Q99590 1463 aaKnown RBP19.38■□□□□ 0.69
SCARB1-205ENST00000538291 ABCC5O15440 1437 aa19.37■□□□□ 0.69
SCARB1-205ENST00000538291 FAM114A1Q8IWE2 563 aa19.37■□□□□ 0.69
SCARB1-205ENST00000538291 USP8P40818 1118 aa19.37■□□□□ 0.69
SCARB1-205ENST00000538291 SMARCC1Q92922 1105 aaPredicted RBP19.37■□□□□ 0.69
SCARB1-205ENST00000538291 MBIPQ9NS73 344 aa19.37■□□□□ 0.69
SCARB1-205ENST00000538291 STX8Q9UNK0 236 aa19.37■□□□□ 0.69
SCARB1-205ENST00000538291 CASQ1P31415 396 aa19.37■□□□□ 0.69
SCARB1-205ENST00000538291 NBPF7P0C2Y1 421 aaPredicted RBP19.36■□□□□ 0.69
SCARB1-205ENST00000538291 MCM3P25205 808 aa19.36■□□□□ 0.69
SCARB1-205ENST00000538291 TMCO3Q6UWJ1 677 aa19.36■□□□□ 0.69
SCARB1-205ENST00000538291 KANK3Q6NY19 840 aa19.36■□□□□ 0.69
SCARB1-205ENST00000538291 SLC26A6Q9BXS9 759 aa19.36■□□□□ 0.69
SCARB1-205ENST00000538291 WDR97A6NE52 1622 aa19.36■□□□□ 0.69
SCARB1-205ENST00000538291 TNRQ92752 1358 aa19.36■□□□□ 0.69
SCARB1-205ENST00000538291 CPLX3Q8WVH0 158 aa19.36■□□□□ 0.69
SCARB1-205ENST00000538291 NLRP3Q96P20 1036 aa19.36■□□□□ 0.69
SCARB1-205ENST00000538291 NPHP3Q7Z494 1330 aa19.35■□□□□ 0.69
SCARB1-205ENST00000538291 ESPNB1AK53 854 aa19.35■□□□□ 0.69
SCARB1-205ENST00000538291 OGFOD1Q8N543 542 aa19.35■□□□□ 0.69
SCARB1-205ENST00000538291 KIF18AQ8NI77 898 aa19.35■□□□□ 0.69
SCARB1-205ENST00000538291 CLIP2Q9UDT6 1046 aa19.35■□□□□ 0.69
SCARB1-205ENST00000538291 UBAP1LF5GYI3 381 aa19.35■□□□□ 0.69
SCARB1-205ENST00000538291 TBCAO75347 108 aaKnown RBP19.35■□□□□ 0.69
SCARB1-205ENST00000538291 ZFYP08048 801 aaPredicted RBP19.35■□□□□ 0.69
SCARB1-205ENST00000538291 GJB2P29033 226 aa19.35■□□□□ 0.69
SCARB1-205ENST00000538291 ATP6V1AP38606 617 aa19.35■□□□□ 0.69
SCARB1-205ENST00000538291 DNA2P51530 1060 aa19.35■□□□□ 0.69
SCARB1-205ENST00000538291 ERMNQ8TAM6 284 aa19.35■□□□□ 0.69
SCARB1-205ENST00000538291 IFFO1Q0D2I5 559 aa19.35■□□□□ 0.69
SCARB1-205ENST00000538291 SLC4A8Q2Y0W8 1093 aa19.35■□□□□ 0.69
SCARB1-205ENST00000538291 MCM5P33992 734 aa19.35■□□□□ 0.69
SCARB1-205ENST00000538291 MAP2K1Q02750 393 aaPredicted RBP19.35■□□□□ 0.69
SCARB1-205ENST00000538291 CKAP2LQ8IYA6 745 aa19.35■□□□□ 0.69
SCARB1-205ENST00000538291 ANKRD36BQ8N2N9 1353 aa19.34■□□□□ 0.69
SCARB1-205ENST00000538291 C20orf194Q5TEA3 1177 aa19.34■□□□□ 0.69
SCARB1-205ENST00000538291 KRT23Q9C075 422 aa19.34■□□□□ 0.69
SCARB1-205ENST00000538291 GRIN2AQ12879 1464 aa19.34■□□□□ 0.69
SCARB1-205ENST00000538291 PRC1O43663 620 aa19.34■□□□□ 0.69
SCARB1-205ENST00000538291 URI1O94763 535 aaPredicted RBP19.34■□□□□ 0.69
SCARB1-205ENST00000538291 TSPY3P0CV98 308 aa19.34■□□□□ 0.69
SCARB1-205ENST00000538291 TSPY8P0CW00 308 aa19.34■□□□□ 0.69
SCARB1-205ENST00000538291 CCDC174Q6PII3 467 aa19.34■□□□□ 0.69
SCARB1-205ENST00000538291 IL16Q14005 1332 aa19.34■□□□□ 0.69
SCARB1-205ENST00000538291 TAOK3Q9H2K8 898 aa19.34■□□□□ 0.69
SCARB1-205ENST00000538291 WTAPQ15007 396 aa19.34■□□□□ 0.69
SCARB1-205ENST00000538291 ALS2CR12Q96Q35 445 aa19.34■□□□□ 0.69
SCARB1-205ENST00000538291 FAM83GA6ND36 823 aa19.33■□□□□ 0.69
SCARB1-205ENST00000538291 CYP7A1P22680 504 aa19.33■□□□□ 0.69
SCARB1-205ENST00000538291 GOPCQ9HD26 462 aa19.33■□□□□ 0.69
SCARB1-205ENST00000538291 DHX29Q7Z478 1369 aaKnown RBP19.33■□□□□ 0.68
SCARB1-205ENST00000538291 ATP2B3Q16720 1220 aa19.33■□□□□ 0.68
SCARB1-205ENST00000538291 JARID2Q92833 1246 aaPredicted RBP19.33■□□□□ 0.68
SCARB1-205ENST00000538291 BICD1Q96G01 975 aa19.33■□□□□ 0.68
SCARB1-205ENST00000538291 INCENPQ9NQS7 918 aa19.33■□□□□ 0.68
SCARB1-205ENST00000538291 ZSCAN30Q86W11 494 aa19.32■□□□□ 0.68
SCARB1-205ENST00000538291 STX6O43752 255 aa19.32■□□□□ 0.68
SCARB1-205ENST00000538291 TMTC2Q8N394 836 aa19.32■□□□□ 0.68
SCARB1-205ENST00000538291 LARP6Q9BRS8 491 aaKnown RBP19.32■□□□□ 0.68
SCARB1-205ENST00000538291 TFIP11Q9UBB9 837 aaKnown RBP19.32■□□□□ 0.68
SCARB1-205ENST00000538291 FANCAO15360 1455 aa19.32■□□□□ 0.68
SCARB1-205ENST00000538291 GCOM1H8Y6P7 765 aaPredicted RBP19.32■□□□□ 0.68
SCARB1-205ENST00000538291 ANXA1P04083 346 aa19.32■□□□□ 0.68
SCARB1-205ENST00000538291 MYZAPP0CAP1 466 aa19.32■□□□□ 0.68
SCARB1-205ENST00000538291 CCDC102BQ68D86 513 aa19.32■□□□□ 0.68
SCARB1-205ENST00000538291 PDCL2Q8N4E4 241 aa19.32■□□□□ 0.68
SCARB1-205ENST00000538291 FERMT1Q9BQL6 677 aa19.32■□□□□ 0.68
SCARB1-205ENST00000538291 PANK2Q9BZ23 570 aa19.32■□□□□ 0.68
SCARB1-205ENST00000538291 TNNT1P13805 278 aa19.32■□□□□ 0.68
SCARB1-205ENST00000538291 STX1AQ16623 288 aa19.32■□□□□ 0.68
SCARB1-205ENST00000538291 ESR2Q92731 530 aa19.32■□□□□ 0.68
SCARB1-205ENST00000538291 PUF60Q9UHX1 559 aaKnown RBP19.32■□□□□ 0.68
SCARB1-205ENST00000538291 BMP2KLQ5H9B9 411 aa19.32■□□□□ 0.68
SCARB1-205ENST00000538291 COMMD10Q9Y6G5 202 aa19.32■□□□□ 0.68
SCARB1-205ENST00000538291 TMCO5BA8MYB1 307 aa19.31■□□□□ 0.68
SCARB1-205ENST00000538291 XAGE3Q8WTP9 111 aa19.31■□□□□ 0.68
SCARB1-205ENST00000538291 ACSBG1Q96GR2 724 aa19.31■□□□□ 0.68
SCARB1-205ENST00000538291 BIN1O00499 593 aa19.31■□□□□ 0.68
SCARB1-205ENST00000538291 RHPN1Q8TCX5 695 aa19.31■□□□□ 0.68
SCARB1-205ENST00000538291 NAA15Q9BXJ9 866 aaKnown RBP19.31■□□□□ 0.68
SCARB1-205ENST00000538291 STAMBPO95630 424 aa19.31■□□□□ 0.68
SCARB1-205ENST00000538291 NEMFO60524 1076 aa19.31■□□□□ 0.68
SCARB1-205ENST00000538291 CNNM2Q9H8M5 875 aa19.31■□□□□ 0.68
SCARB1-205ENST00000538291 GNAQP50148 359 aa19.3■□□□□ 0.68
SCARB1-205ENST00000538291 DDB1Q16531 1140 aa19.3■□□□□ 0.68
SCARB1-205ENST00000538291 BMP15O95972 392 aa19.3■□□□□ 0.68
SCARB1-205ENST00000538291 GSDMDP57764 484 aa19.3■□□□□ 0.68
SCARB1-205ENST00000538291 RAB11FIP4Q86YS3 637 aa19.3■□□□□ 0.68
SCARB1-205ENST00000538291 SSFA2P28290 1259 aa19.3■□□□□ 0.68
SCARB1-205ENST00000538291 USP37Q86T82 979 aa19.3■□□□□ 0.68
SCARB1-205ENST00000538291 SLC4A4Q9Y6R1 1079 aa19.3■□□□□ 0.68
SCARB1-205ENST00000538291 TBC1D9Q6ZT07 1266 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms