RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-215ENST00000537551 ATP5J2-PTCD1G3V325 749 aa29.85■■■□□ 2.37
CHFR-215ENST00000537551 VAMP4O75379 141 aa29.85■■■□□ 2.37
CHFR-215ENST00000537551 ZNF784Q8NCA9 323 aaPredicted RBP29.85■■■□□ 2.37
CHFR-215ENST00000537551 TRMT112Q9UI30 125 aaKnown RBP29.85■■■□□ 2.37
CHFR-215ENST00000537551 COL11A2P13942 1736 aaPredicted RBP29.85■■■□□ 2.37
CHFR-215ENST00000537551 SLC4A2P04920 1241 aa29.84■■■□□ 2.37
CHFR-215ENST00000537551 ZNF428Q96B54 188 aa29.84■■■□□ 2.37
CHFR-215ENST00000537551 C21orf2O43822 256 aa29.83■■■□□ 2.37
CHFR-215ENST00000537551 PRPF40BQ6NWY9 871 aaKnown RBP29.82■■■□□ 2.36
CHFR-215ENST00000537551 ISCA1Q9BUE6 129 aa29.82■■■□□ 2.36
CHFR-215ENST00000537551 ANKRD36CQ5JPF3 1778 aa29.82■■■□□ 2.36
CHFR-215ENST00000537551 RNF123Q5XPI4 1314 aa29.81■■■□□ 2.36
CHFR-215ENST00000537551 ALDH1B1P30837 517 aa29.81■■■□□ 2.36
CHFR-215ENST00000537551 RPGRQ92834 1020 aaKnown RBP29.81■■■□□ 2.36
CHFR-215ENST00000537551 NLRP3Q96P20 1036 aa29.81■■■□□ 2.36
CHFR-215ENST00000537551 SLC10A5Q5PT55 438 aa29.8■■■□□ 2.36
CHFR-215ENST00000537551 MYD88Q99836 296 aa29.8■■■□□ 2.36
CHFR-215ENST00000537551 SH3TC1Q8TE82 1336 aa29.79■■■□□ 2.36
CHFR-215ENST00000537551 CRY2Q49AN0 593 aa29.79■■■□□ 2.36
CHFR-215ENST00000537551 E9PSI1 815 aa29.78■■■□□ 2.36
CHFR-215ENST00000537551 C9orf131Q5VYM1 1079 aa29.78■■■□□ 2.36
CHFR-215ENST00000537551 KSR2Q6VAB6 950 aa29.78■■■□□ 2.36
CHFR-215ENST00000537551 G2E3Q7L622 706 aa29.78■■■□□ 2.36
CHFR-215ENST00000537551 SYNE4Q8N205 404 aa29.78■■■□□ 2.36
CHFR-215ENST00000537551 MAP3K2Q9Y2U5 619 aa29.78■■■□□ 2.36
CHFR-215ENST00000537551 RIC1Q4ADV7 1423 aa29.78■■■□□ 2.36
CHFR-215ENST00000537551 HCLS1P14317 486 aaPredicted RBP29.77■■■□□ 2.36
CHFR-215ENST00000537551 RASSF7Q02833 373 aa29.77■■■□□ 2.36
CHFR-215ENST00000537551 TRIM28Q13263 835 aaKnown RBP29.77■■■□□ 2.36
CHFR-215ENST00000537551 METTL22Q9BUU2 404 aaPredicted RBP29.77■■■□□ 2.36
CHFR-215ENST00000537551 TNRC6CQ9HCJ0 1690 aaKnown RBP29.76■■■□□ 2.36
CHFR-215ENST00000537551 PI4KAP2A4QPH2 592 aa29.76■■■□□ 2.35
CHFR-215ENST00000537551 SOGA3Q5TF21 947 aa29.76■■■□□ 2.35
CHFR-215ENST00000537551 PI4KAP1Q8N8J0 262 aa29.76■■■□□ 2.35
CHFR-215ENST00000537551 RBM17Q96I25 401 aaKnown RBP29.76■■■□□ 2.35
CHFR-215ENST00000537551 ARFGEF2Q9Y6D5 1785 aa29.76■■■□□ 2.35
CHFR-215ENST00000537551 SLX4Q8IY92 1834 aa29.75■■■□□ 2.35
CHFR-215ENST00000537551 C3orf67Q6ZVT6 689 aa29.75■■■□□ 2.35
CHFR-215ENST00000537551 FAM89AQ96GI7 184 aa29.75■■■□□ 2.35
CHFR-215ENST00000537551 RNF181Q9P0P0 153 aa29.75■■■□□ 2.35
CHFR-215ENST00000537551 FLIIQ13045 1269 aa29.74■■■□□ 2.35
CHFR-215ENST00000537551 RTL5Q5HYW3 569 aaPredicted RBP29.74■■■□□ 2.35
CHFR-215ENST00000537551 CACNA1SQ13698 1873 aa29.74■■■□□ 2.35
CHFR-215ENST00000537551 HOXA10P31260 410 aaPredicted RBP29.73■■■□□ 2.35
CHFR-215ENST00000537551 SLFN5Q08AF3 891 aa29.73■■■□□ 2.35
CHFR-215ENST00000537551 ADCY9O60503 1353 aa29.73■■■□□ 2.35
CHFR-215ENST00000537551 NEXNQ0ZGT2 675 aa29.72■■■□□ 2.35
CHFR-215ENST00000537551 FKBP5Q13451 457 aaPredicted RBP29.72■■■□□ 2.35
CHFR-215ENST00000537551 CCDC191Q8NCU4 936 aa29.72■■■□□ 2.35
CHFR-215ENST00000537551 ZNF526Q8TF50 670 aaPredicted RBP29.72■■■□□ 2.35
CHFR-215ENST00000537551 NFKBIEO00221 500 aa29.71■■■□□ 2.35
CHFR-215ENST00000537551 LMNB1P20700 586 aa29.71■■■□□ 2.35
CHFR-215ENST00000537551 C7orf43Q8WVR3 580 aa29.71■■■□□ 2.35
CHFR-215ENST00000537551 CDCA7LQ96GN5 454 aa29.71■■■□□ 2.35
CHFR-215ENST00000537551 CRAMP1Q96RY5 1269 aa29.71■■■□□ 2.35
CHFR-215ENST00000537551 CWC25Q9NXE8 425 aaPredicted RBP29.71■■■□□ 2.35
CHFR-215ENST00000537551 CCDC93Q567U6 631 aa29.7■■■□□ 2.35
CHFR-215ENST00000537551 ZBTB38Q8NAP3 1195 aaPredicted RBP29.69■■■□□ 2.34
CHFR-215ENST00000537551 TAOK3Q9H2K8 898 aa29.69■■■□□ 2.34
CHFR-215ENST00000537551 IRS4O14654 1257 aaPredicted RBP29.68■■■□□ 2.34
CHFR-215ENST00000537551 GPBP1L1Q9HC44 474 aaPredicted RBP29.68■■■□□ 2.34
CHFR-215ENST00000537551 OLFM4Q6UX06 510 aa29.67■■■□□ 2.34
CHFR-215ENST00000537551 DDX46Q7L014 1031 aaKnown RBP29.67■■■□□ 2.34
CHFR-215ENST00000537551 RTKN2Q8IZC4 609 aa29.66■■■□□ 2.34
CHFR-215ENST00000537551 CACNA1FO60840 1977 aa29.66■■■□□ 2.34
CHFR-215ENST00000537551 PPEF1O14829 653 aaPredicted RBP29.65■■■□□ 2.34
CHFR-215ENST00000537551 PCCAP05165 728 aaPredicted RBP29.65■■■□□ 2.34
CHFR-215ENST00000537551 IGKV5-2P06315 115 aa29.65■■■□□ 2.34
CHFR-215ENST00000537551 HSP90B1P14625 803 aaKnown RBP29.65■■■□□ 2.34
CHFR-215ENST00000537551 PRELPP51888 382 aa29.65■■■□□ 2.34
CHFR-215ENST00000537551 DNAAF4Q8WXU2 420 aa29.65■■■□□ 2.34
CHFR-215ENST00000537551 JARID2Q92833 1246 aaPredicted RBP29.65■■■□□ 2.34
CHFR-215ENST00000537551 SBF1O95248 1867 aa29.64■■■□□ 2.34
CHFR-215ENST00000537551 TMX4Q9H1E5 349 aaPredicted RBP29.64■■■□□ 2.34
CHFR-215ENST00000537551 LTBP3Q9NS15 1303 aa29.64■■■□□ 2.34
CHFR-215ENST00000537551 CWF19L2Q2TBE0 894 aaKnown RBP29.63■■■□□ 2.33
CHFR-215ENST00000537551 CC2D2BQ6DHV5 1058 aa29.63■■■□□ 2.33
CHFR-215ENST00000537551 ABCC4O15439 1325 aa29.63■■■□□ 2.33
CHFR-215ENST00000537551 FER1L6Q2WGJ9 1857 aa29.62■■■□□ 2.33
CHFR-215ENST00000537551 NEURL1BA8MQ27 555 aa29.61■■■□□ 2.33
CHFR-215ENST00000537551 BBOX1O75936 387 aa29.61■■■□□ 2.33
CHFR-215ENST00000537551 FKBP4Q02790 459 aaKnown RBP eCLIP29.61■■■□□ 2.33
CHFR-215ENST00000537551 SF3B3Q15393 1217 aaKnown RBP29.61■■■□□ 2.33
CHFR-215ENST00000537551 TRMT2AQ8IZ69 625 aaKnown RBP29.61■■■□□ 2.33
CHFR-215ENST00000537551 HNRNPUQ00839 825 aaKnown RBP eCLIP29.6■■■□□ 2.33
CHFR-215ENST00000537551 LAMB2P55268 1798 aa29.59■■■□□ 2.33
CHFR-215ENST00000537551 F6X3S4 739 aa29.59■■■□□ 2.33
CHFR-215ENST00000537551 GRAPQ13588 217 aa29.59■■■□□ 2.33
CHFR-215ENST00000537551 GRAPLQ8TC17 118 aaPredicted RBP29.59■■■□□ 2.33
CHFR-215ENST00000537551 PDE8AO60658 829 aa29.58■■■□□ 2.33
CHFR-215ENST00000537551 CCDC88AQ3V6T2 1871 aa29.58■■■□□ 2.33
CHFR-215ENST00000537551 GRIPAP1Q4V328 841 aa29.58■■■□□ 2.33
CHFR-215ENST00000537551 DDX60Q8IY21 1712 aaKnown RBP29.58■■■□□ 2.33
CHFR-215ENST00000537551 LINS1Q8NG48 757 aa29.58■■■□□ 2.33
CHFR-215ENST00000537551 ZC3H4Q9UPT8 1303 aaKnown RBP29.57■■■□□ 2.32
CHFR-215ENST00000537551 ZNF277Q9NRM2 450 aaPredicted RBP29.57■■■□□ 2.32
CHFR-215ENST00000537551 ATP6V0A2Q9Y487 856 aa29.57■■■□□ 2.32
CHFR-215ENST00000537551 MRPL50Q8N5N7 158 aaKnown RBP29.56■■■□□ 2.32
CHFR-215ENST00000537551 KDM2BQ8NHM5 1336 aa29.55■■■□□ 2.32
CHFR-215ENST00000537551 CDHR2Q9BYE9 1310 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms