RNA–Protein interactions for RNA: ENST00000537533.1

PTPN6-209, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-209ENST00000537533 SALL2Q9Y467 1007 aaPredicted RBP16.13■□□□□ 0.17
PTPN6-209ENST00000537533 PRPF40BQ6NWY9 871 aaKnown RBP16.12■□□□□ 0.17
PTPN6-209ENST00000537533 UTP14AQ9BVJ6 771 aaKnown RBP16.12■□□□□ 0.17
PTPN6-209ENST00000537533 FANCIQ9NVI1 1328 aa16.12■□□□□ 0.17
PTPN6-209ENST00000537533 LAMB2P55268 1798 aa16.11■□□□□ 0.17
PTPN6-209ENST00000537533 TWISTNBQ3B726 338 aaPredicted RBP16.11■□□□□ 0.17
PTPN6-209ENST00000537533 C9orf131Q5VYM1 1079 aa16.11■□□□□ 0.17
PTPN6-209ENST00000537533 C7orf43Q8WVR3 580 aa16.11■□□□□ 0.17
PTPN6-209ENST00000537533 ISCA1Q9BUE6 129 aa16.11■□□□□ 0.17
PTPN6-209ENST00000537533 PHAXQ9H814 394 aaKnown RBP16.11■□□□□ 0.17
PTPN6-209ENST00000537533 ZNF521Q96K83 1311 aa16.11■□□□□ 0.17
PTPN6-209ENST00000537533 C21orf2O43822 256 aa16.1■□□□□ 0.17
PTPN6-209ENST00000537533 ALDH1B1P30837 517 aa16.1■□□□□ 0.17
PTPN6-209ENST00000537533 HOXA10P31260 410 aaPredicted RBP16.1■□□□□ 0.17
PTPN6-209ENST00000537533 TRIM28Q13263 835 aaKnown RBP16.1■□□□□ 0.17
PTPN6-209ENST00000537533 SOGA3Q5TF21 947 aa16.1■□□□□ 0.17
PTPN6-209ENST00000537533 NFKBIEO00221 500 aa16.09■□□□□ 0.17
PTPN6-209ENST00000537533 RASSF7Q02833 373 aa16.09■□□□□ 0.17
PTPN6-209ENST00000537533 GOLGA2Q08379 1002 aa16.09■□□□□ 0.17
PTPN6-209ENST00000537533 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
PTPN6-209ENST00000537533 LTBP3Q9NS15 1303 aa16.09■□□□□ 0.17
PTPN6-209ENST00000537533 DDX60Q8IY21 1712 aaKnown RBP16.08■□□□□ 0.17
PTPN6-209ENST00000537533 LMNB1P20700 586 aa16.08■□□□□ 0.16
PTPN6-209ENST00000537533 PRELPP51888 382 aa16.08■□□□□ 0.16
PTPN6-209ENST00000537533 NLRP3Q96P20 1036 aa16.08■□□□□ 0.16
PTPN6-209ENST00000537533 RNF181Q9P0P0 153 aa16.08■□□□□ 0.16
PTPN6-209ENST00000537533 ZC3H4Q9UPT8 1303 aaKnown RBP16.08■□□□□ 0.16
PTPN6-209ENST00000537533 VAMP4O75379 141 aa16.07■□□□□ 0.16
PTPN6-209ENST00000537533 C3orf67Q6ZVT6 689 aa16.07■□□□□ 0.16
PTPN6-209ENST00000537533 RIC3Q7Z5B4 369 aa16.07■□□□□ 0.16
PTPN6-209ENST00000537533 CRAMP1Q96RY5 1269 aa16.07■□□□□ 0.16
PTPN6-209ENST00000537533 STK31Q9BXU1 1019 aa16.07■□□□□ 0.16
PTPN6-209ENST00000537533 MYH16Q9H6N6 1097 aa16.07■□□□□ 0.16
PTPN6-209ENST00000537533 GPBP1L1Q9HC44 474 aaPredicted RBP16.07■□□□□ 0.16
PTPN6-209ENST00000537533 TRMT112Q9UI30 125 aaKnown RBP16.07■□□□□ 0.16
PTPN6-209ENST00000537533 SH3TC1Q8TE82 1336 aa16.07■□□□□ 0.16
PTPN6-209ENST00000537533 TIAM2Q8IVF5 1701 aa16.06■□□□□ 0.16
PTPN6-209ENST00000537533 DDX58O95786 925 aaKnown RBP16.06■□□□□ 0.16
PTPN6-209ENST00000537533 EXOSC9Q06265 439 aaKnown RBP16.06■□□□□ 0.16
PTPN6-209ENST00000537533 RPGRQ92834 1020 aaKnown RBP16.06■□□□□ 0.16
PTPN6-209ENST00000537533 RBM17Q96I25 401 aaKnown RBP16.06■□□□□ 0.16
PTPN6-209ENST00000537533 ZNF219Q9P2Y4 722 aaPredicted RBP16.06■□□□□ 0.16
PTPN6-209ENST00000537533 SNED1Q8TER0 1413 aa16.05■□□□□ 0.16
PTPN6-209ENST00000537533 ATP5J2-PTCD1G3V325 749 aa16.05■□□□□ 0.16
PTPN6-209ENST00000537533 CCDC93Q567U6 631 aa16.05■□□□□ 0.16
PTPN6-209ENST00000537533 TAOK3Q9H2K8 898 aa16.05■□□□□ 0.16
PTPN6-209ENST00000537533 SLC4A2P04920 1241 aa16.04■□□□□ 0.16
PTPN6-209ENST00000537533 KSR2Q6VAB6 950 aa16.04■□□□□ 0.16
PTPN6-209ENST00000537533 SYNE4Q8N205 404 aa16.04■□□□□ 0.16
PTPN6-209ENST00000537533 METTL22Q9BUU2 404 aaPredicted RBP16.04■□□□□ 0.16
PTPN6-209ENST00000537533 HCLS1P14317 486 aaPredicted RBP16.03■□□□□ 0.16
PTPN6-209ENST00000537533 CC2D2BQ6DHV5 1058 aa16.03■□□□□ 0.16
PTPN6-209ENST00000537533 G2E3Q7L622 706 aa16.03■□□□□ 0.16
PTPN6-209ENST00000537533 RTKN2Q8IZC4 609 aa16.03■□□□□ 0.16
PTPN6-209ENST00000537533 CCDC191Q8NCU4 936 aa16.03■□□□□ 0.16
PTPN6-209ENST00000537533 ZNF526Q8TF50 670 aaPredicted RBP16.03■□□□□ 0.16
PTPN6-209ENST00000537533 MYD88Q99836 296 aa16.03■□□□□ 0.16
PTPN6-209ENST00000537533 TAF1P21675 1872 aa16.03■□□□□ 0.16
PTPN6-209ENST00000537533 PI4KAP2A4QPH2 592 aa16.02■□□□□ 0.16
PTPN6-209ENST00000537533 TCERG1O14776 1098 aaKnown RBP16.02■□□□□ 0.16
PTPN6-209ENST00000537533 FKBP4Q02790 459 aaKnown RBP eCLIP16.02■□□□□ 0.16
PTPN6-209ENST00000537533 GRIPAP1Q4V328 841 aa16.02■□□□□ 0.16
PTPN6-209ENST00000537533 DIEXFQ68CQ4 756 aaKnown RBP16.02■□□□□ 0.16
PTPN6-209ENST00000537533 PI4KAP1Q8N8J0 262 aa16.02■□□□□ 0.16
PTPN6-209ENST00000537533 ZBTB38Q8NAP3 1195 aaPredicted RBP16.02■□□□□ 0.16
PTPN6-209ENST00000537533 FAM89AQ96GI7 184 aa16.02■□□□□ 0.16
PTPN6-209ENST00000537533 MAP3K2Q9Y2U5 619 aa16.02■□□□□ 0.16
PTPN6-209ENST00000537533 ABCC4O15439 1325 aa16.01■□□□□ 0.15
PTPN6-209ENST00000537533 KIF3CO14782 793 aa16.01■□□□□ 0.15
PTPN6-209ENST00000537533 FLIIQ13045 1269 aa16.01■□□□□ 0.15
PTPN6-209ENST00000537533 SF3B3Q15393 1217 aaKnown RBP16.01■□□□□ 0.15
PTPN6-209ENST00000537533 OLFM4Q6UX06 510 aa16.01■□□□□ 0.15
PTPN6-209ENST00000537533 KDM2BQ8NHM5 1336 aa16■□□□□ 0.15
PTPN6-209ENST00000537533 E9PSI1 815 aa16■□□□□ 0.15
PTPN6-209ENST00000537533 C1QTNF8P60827 252 aa16■□□□□ 0.15
PTPN6-209ENST00000537533 PSMD1Q99460 953 aa16■□□□□ 0.15
PTPN6-209ENST00000537533 CWC25Q9NXE8 425 aaPredicted RBP16■□□□□ 0.15
PTPN6-209ENST00000537533 MYH3P11055 1940 aa16■□□□□ 0.15
PTPN6-209ENST00000537533 GLTPD2A6NH11 291 aa15.99■□□□□ 0.15
PTPN6-209ENST00000537533 IRS4O14654 1257 aaPredicted RBP15.99■□□□□ 0.15
PTPN6-209ENST00000537533 PPEF1O14829 653 aaPredicted RBP15.99■□□□□ 0.15
PTPN6-209ENST00000537533 BBOX1O75936 387 aa15.99■□□□□ 0.15
PTPN6-209ENST00000537533 PCCAP05165 728 aaPredicted RBP15.99■□□□□ 0.15
PTPN6-209ENST00000537533 IGKV5-2P06315 115 aa15.99■□□□□ 0.15
PTPN6-209ENST00000537533 HSP90B1P14625 803 aaKnown RBP15.99■□□□□ 0.15
PTPN6-209ENST00000537533 DDX46Q7L014 1031 aaKnown RBP15.99■□□□□ 0.15
PTPN6-209ENST00000537533 ZNF428Q96B54 188 aa15.99■□□□□ 0.15
PTPN6-209ENST00000537533 ATP6V0A2Q9Y487 856 aa15.99■□□□□ 0.15
PTPN6-209ENST00000537533 SLFN5Q08AF3 891 aa15.98■□□□□ 0.15
PTPN6-209ENST00000537533 NEXNQ0ZGT2 675 aa15.98■□□□□ 0.15
PTPN6-209ENST00000537533 GRAPQ13588 217 aa15.98■□□□□ 0.15
PTPN6-209ENST00000537533 GRAPLQ8TC17 118 aaPredicted RBP15.98■□□□□ 0.15
PTPN6-209ENST00000537533 NMRK2Q9NPI5 230 aa15.98■□□□□ 0.15
PTPN6-209ENST00000537533 CDHR2Q9BYE9 1310 aa15.97■□□□□ 0.15
PTPN6-209ENST00000537533 LRRC37AA6NMS7 1700 aa15.97■□□□□ 0.15
PTPN6-209ENST00000537533 WDR90Q96KV7 1748 aa15.97■□□□□ 0.15
PTPN6-209ENST00000537533 FKBP5Q13451 457 aaPredicted RBP15.97■□□□□ 0.15
PTPN6-209ENST00000537533 TMC4Q7Z404 712 aa15.97■□□□□ 0.15
PTPN6-209ENST00000537533 SP8Q8IXZ3 490 aa15.97■□□□□ 0.15
PTPN6-209ENST00000537533 ZNF277Q9NRM2 450 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms