RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 NLRP10Q86W26 655 aa22.24■■□□□ 1.15
SFSWAP-205ENST00000537164 TSPYL6Q8N831 410 aa22.24■■□□□ 1.15
SFSWAP-205ENST00000537164 LTBP3Q9NS15 1303 aa22.24■■□□□ 1.15
SFSWAP-205ENST00000537164 LMNB1P20700 586 aa22.23■■□□□ 1.15
SFSWAP-205ENST00000537164 ALDH1B1P30837 517 aa22.23■■□□□ 1.15
SFSWAP-205ENST00000537164 PRELPP51888 382 aa22.23■■□□□ 1.15
SFSWAP-205ENST00000537164 SOGA3Q5TF21 947 aa22.23■■□□□ 1.15
SFSWAP-205ENST00000537164 CCDC30Q5VVM6 783 aa22.23■■□□□ 1.15
SFSWAP-205ENST00000537164 UTP14AQ9BVJ6 771 aaKnown RBP22.23■■□□□ 1.15
SFSWAP-205ENST00000537164 GPBP1L1Q9HC44 474 aaPredicted RBP22.23■■□□□ 1.15
SFSWAP-205ENST00000537164 ZC3H4Q9UPT8 1303 aaKnown RBP22.23■■□□□ 1.15
SFSWAP-205ENST00000537164 CACNA1FO60840 1977 aa22.22■■□□□ 1.15
SFSWAP-205ENST00000537164 HOXA10P31260 410 aaPredicted RBP22.22■■□□□ 1.15
SFSWAP-205ENST00000537164 RASSF7Q02833 373 aa22.22■■□□□ 1.15
SFSWAP-205ENST00000537164 RNF181Q9P0P0 153 aa22.22■■□□□ 1.15
SFSWAP-205ENST00000537164 LAMB2P55268 1798 aa22.21■■□□□ 1.15
SFSWAP-205ENST00000537164 ISCA1Q9BUE6 129 aa22.21■■□□□ 1.15
SFSWAP-205ENST00000537164 TIAM2Q8IVF5 1701 aa22.2■■□□□ 1.14
SFSWAP-205ENST00000537164 TRIM28Q13263 835 aaKnown RBP22.2■■□□□ 1.14
SFSWAP-205ENST00000537164 PHAXQ9H814 394 aaKnown RBP22.2■■□□□ 1.14
SFSWAP-205ENST00000537164 FANCIQ9NVI1 1328 aa22.2■■□□□ 1.14
SFSWAP-205ENST00000537164 TWISTNBQ3B726 338 aaPredicted RBP22.19■■□□□ 1.14
SFSWAP-205ENST00000537164 DDX60Q8IY21 1712 aaKnown RBP22.18■■□□□ 1.14
SFSWAP-205ENST00000537164 SNED1Q8TER0 1413 aa22.18■■□□□ 1.14
SFSWAP-205ENST00000537164 ZNF521Q96K83 1311 aa22.17■■□□□ 1.14
SFSWAP-205ENST00000537164 C1QTNF8P60827 252 aa22.17■■□□□ 1.14
SFSWAP-205ENST00000537164 ZNF526Q8TF50 670 aaPredicted RBP22.17■■□□□ 1.14
SFSWAP-205ENST00000537164 NLRP3Q96P20 1036 aa22.17■■□□□ 1.14
SFSWAP-205ENST00000537164 CRAMP1Q96RY5 1269 aa22.17■■□□□ 1.14
SFSWAP-205ENST00000537164 ZNF219Q9P2Y4 722 aaPredicted RBP22.17■■□□□ 1.14
SFSWAP-205ENST00000537164 TRMT112Q9UI30 125 aaKnown RBP22.17■■□□□ 1.14
SFSWAP-205ENST00000537164 SALL2Q9Y467 1007 aaPredicted RBP22.17■■□□□ 1.14
SFSWAP-205ENST00000537164 SH3TC1Q8TE82 1336 aa22.16■■□□□ 1.14
SFSWAP-205ENST00000537164 CCER2I3L3R5 266 aa22.16■■□□□ 1.14
SFSWAP-205ENST00000537164 GOLGA2Q08379 1002 aa22.16■■□□□ 1.14
SFSWAP-205ENST00000537164 CCDC93Q567U6 631 aa22.16■■□□□ 1.14
SFSWAP-205ENST00000537164 C3orf67Q6ZVT6 689 aa22.16■■□□□ 1.14
SFSWAP-205ENST00000537164 RPGRQ92834 1020 aaKnown RBP22.16■■□□□ 1.14
SFSWAP-205ENST00000537164 TAOK3Q9H2K8 898 aa22.16■■□□□ 1.14
SFSWAP-205ENST00000537164 RIC3Q7Z5B4 369 aa22.15■■□□□ 1.14
SFSWAP-205ENST00000537164 SPINK5Q9NQ38 1064 aaPredicted RBP22.15■■□□□ 1.14
SFSWAP-205ENST00000537164 KIF3CO14782 793 aa22.14■■□□□ 1.13
SFSWAP-205ENST00000537164 SYNE4Q8N205 404 aa22.14■■□□□ 1.13
SFSWAP-205ENST00000537164 RBM17Q96I25 401 aaKnown RBP22.14■■□□□ 1.13
SFSWAP-205ENST00000537164 STK31Q9BXU1 1019 aa22.14■■□□□ 1.13
SFSWAP-205ENST00000537164 ATP5J2-PTCD1G3V325 749 aa22.13■■□□□ 1.13
SFSWAP-205ENST00000537164 DDX58O95786 925 aaKnown RBP22.13■■□□□ 1.13
SFSWAP-205ENST00000537164 CC2D2BQ6DHV5 1058 aa22.13■■□□□ 1.13
SFSWAP-205ENST00000537164 RTKN2Q8IZC4 609 aa22.13■■□□□ 1.13
SFSWAP-205ENST00000537164 KDM2BQ8NHM5 1336 aa22.12■■□□□ 1.13
SFSWAP-205ENST00000537164 VAMP4O75379 141 aa22.12■■□□□ 1.13
SFSWAP-205ENST00000537164 FKBP4Q02790 459 aaKnown RBP eCLIP22.12■■□□□ 1.13
SFSWAP-205ENST00000537164 MYH16Q9H6N6 1097 aa22.12■■□□□ 1.13
SFSWAP-205ENST00000537164 HCLS1P14317 486 aaPredicted RBP22.11■■□□□ 1.13
SFSWAP-205ENST00000537164 EXOSC9Q06265 439 aaKnown RBP22.11■■□□□ 1.13
SFSWAP-205ENST00000537164 GRIPAP1Q4V328 841 aa22.11■■□□□ 1.13
SFSWAP-205ENST00000537164 OLFM4Q6UX06 510 aa22.11■■□□□ 1.13
SFSWAP-205ENST00000537164 CCDC191Q8NCU4 936 aa22.11■■□□□ 1.13
SFSWAP-205ENST00000537164 METTL22Q9BUU2 404 aaPredicted RBP22.11■■□□□ 1.13
SFSWAP-205ENST00000537164 GLTPD2A6NH11 291 aa22.1■■□□□ 1.13
SFSWAP-205ENST00000537164 SLC4A2P04920 1241 aa22.1■■□□□ 1.13
SFSWAP-205ENST00000537164 KSR2Q6VAB6 950 aa22.1■■□□□ 1.13
SFSWAP-205ENST00000537164 FAM89AQ96GI7 184 aa22.1■■□□□ 1.13
SFSWAP-205ENST00000537164 PSMD1Q99460 953 aa22.1■■□□□ 1.13
SFSWAP-205ENST00000537164 NMRK2Q9NPI5 230 aa22.09■■□□□ 1.13
SFSWAP-205ENST00000537164 ABCC4O15439 1325 aa22.08■■□□□ 1.13
SFSWAP-205ENST00000537164 PI4KAP2A4QPH2 592 aa22.08■■□□□ 1.13
SFSWAP-205ENST00000537164 SF3B3Q15393 1217 aaKnown RBP22.08■■□□□ 1.13
SFSWAP-205ENST00000537164 PI4KAP1Q8N8J0 262 aa22.08■■□□□ 1.13
SFSWAP-205ENST00000537164 ZBTB38Q8NAP3 1195 aaPredicted RBP22.08■■□□□ 1.13
SFSWAP-205ENST00000537164 MYD88Q99836 296 aa22.08■■□□□ 1.13
SFSWAP-205ENST00000537164 MAP3K2Q9Y2U5 619 aa22.08■■□□□ 1.13
SFSWAP-205ENST00000537164 CEP350Q5VT06 3117 aa22.08■■□□□ 1.12
SFSWAP-205ENST00000537164 TAF1P21675 1872 aa22.07■■□□□ 1.12
SFSWAP-205ENST00000537164 WDR90Q96KV7 1748 aa22.07■■□□□ 1.12
SFSWAP-205ENST00000537164 PPEF1O14829 653 aaPredicted RBP22.07■■□□□ 1.12
SFSWAP-205ENST00000537164 G2E3Q7L622 706 aa22.07■■□□□ 1.12
SFSWAP-205ENST00000537164 TCERG1O14776 1098 aaKnown RBP22.06■■□□□ 1.12
SFSWAP-205ENST00000537164 BBOX1O75936 387 aa22.06■■□□□ 1.12
SFSWAP-205ENST00000537164 PCCAP05165 728 aaPredicted RBP22.06■■□□□ 1.12
SFSWAP-205ENST00000537164 ATP6V0A2Q9Y487 856 aa22.06■■□□□ 1.12
SFSWAP-205ENST00000537164 LRRC37AA6NMS7 1700 aa22.06■■□□□ 1.12
SFSWAP-205ENST00000537164 IRS4O14654 1257 aaPredicted RBP22.05■■□□□ 1.12
SFSWAP-205ENST00000537164 TOMM70O94826 608 aa22.05■■□□□ 1.12
SFSWAP-205ENST00000537164 IGKV5-2P06315 115 aa22.05■■□□□ 1.12
SFSWAP-205ENST00000537164 FLIIQ13045 1269 aa22.05■■□□□ 1.12
SFSWAP-205ENST00000537164 DDX46Q7L014 1031 aaKnown RBP22.05■■□□□ 1.12
SFSWAP-205ENST00000537164 CWC25Q9NXE8 425 aaPredicted RBP22.05■■□□□ 1.12
SFSWAP-205ENST00000537164 HSP90B1P14625 803 aaKnown RBP22.04■■□□□ 1.12
SFSWAP-205ENST00000537164 GRAPQ13588 217 aa22.04■■□□□ 1.12
SFSWAP-205ENST00000537164 DPY19L2Q6NUT2 758 aa22.04■■□□□ 1.12
SFSWAP-205ENST00000537164 GRAPLQ8TC17 118 aaPredicted RBP22.04■■□□□ 1.12
SFSWAP-205ENST00000537164 ZNF428Q96B54 188 aa22.04■■□□□ 1.12
SFSWAP-205ENST00000537164 ZNF277Q9NRM2 450 aaPredicted RBP22.04■■□□□ 1.12
SFSWAP-205ENST00000537164 IARSP41252 1262 aaKnown RBP22.03■■□□□ 1.12
SFSWAP-205ENST00000537164 TMC4Q7Z404 712 aa22.03■■□□□ 1.12
SFSWAP-205ENST00000537164 SP8Q8IXZ3 490 aa22.03■■□□□ 1.12
SFSWAP-205ENST00000537164 NEXNQ0ZGT2 675 aa22.02■■□□□ 1.12
SFSWAP-205ENST00000537164 RRAGCQ9HB90 399 aa22.02■■□□□ 1.12
SFSWAP-205ENST00000537164 CDHR2Q9BYE9 1310 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms