RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 PNNQ9H307 717 aaKnown RBP13.33□□□□□ -0.28
CLSTN3-203ENST00000534830 MIS18AQ9NYP9 233 aa13.33□□□□□ -0.28
CLSTN3-203ENST00000534830 TNRC18O15417 2968 aaPredicted RBP13.32□□□□□ -0.28
CLSTN3-203ENST00000534830 FZD9O00144 591 aa13.32□□□□□ -0.28
CLSTN3-203ENST00000534830 RGL2O15211 777 aa13.32□□□□□ -0.28
CLSTN3-203ENST00000534830 LMOD1P29536 600 aaPredicted RBP13.32□□□□□ -0.28
CLSTN3-203ENST00000534830 IARSP41252 1262 aaKnown RBP13.32□□□□□ -0.28
CLSTN3-203ENST00000534830 PIP4K2AP48426 406 aaPredicted RBP13.32□□□□□ -0.28
CLSTN3-203ENST00000534830 DDX10Q13206 875 aaKnown RBP13.32□□□□□ -0.28
CLSTN3-203ENST00000534830 DGKZQ13574 1117 aa13.32□□□□□ -0.28
CLSTN3-203ENST00000534830 OLFM4Q6UX06 510 aa13.32□□□□□ -0.28
CLSTN3-203ENST00000534830 DZIP3Q86Y13 1208 aaKnown RBP13.32□□□□□ -0.28
CLSTN3-203ENST00000534830 RTKN2Q8IZC4 609 aa13.32□□□□□ -0.28
CLSTN3-203ENST00000534830 GPC2Q8N158 579 aa13.32□□□□□ -0.28
CLSTN3-203ENST00000534830 PNISRQ8TF01 805 aaKnown RBP13.32□□□□□ -0.28
CLSTN3-203ENST00000534830 GJA3Q9Y6H8 435 aa13.32□□□□□ -0.28
CLSTN3-203ENST00000534830 TRPM7Q96QT4 1865 aa13.31□□□□□ -0.28
CLSTN3-203ENST00000534830 NEFMP07197 916 aa13.31□□□□□ -0.28
CLSTN3-203ENST00000534830 NPR1P16066 1061 aa13.31□□□□□ -0.28
CLSTN3-203ENST00000534830 MAP2K2P36507 400 aa13.31□□□□□ -0.28
CLSTN3-203ENST00000534830 EIF4A1P60842 406 aaKnown RBP13.31□□□□□ -0.28
CLSTN3-203ENST00000534830 SYNE4Q8N205 404 aa13.31□□□□□ -0.28
CLSTN3-203ENST00000534830 NUP98P52948 1817 aa13.3□□□□□ -0.28
CLSTN3-203ENST00000534830 TRAF5O00463 557 aa13.3□□□□□ -0.28
CLSTN3-203ENST00000534830 CA12O43570 354 aa13.3□□□□□ -0.28
CLSTN3-203ENST00000534830 CST9Q5W186 159 aa13.3□□□□□ -0.28
CLSTN3-203ENST00000534830 NBPF5PQ86XG9 351 aaPredicted RBP13.3□□□□□ -0.28
CLSTN3-203ENST00000534830 JDP2Q8WYK2 163 aa13.3□□□□□ -0.28
CLSTN3-203ENST00000534830 TLL2Q9Y6L7 1015 aa13.3□□□□□ -0.28
CLSTN3-203ENST00000534830 MYBBP1AQ9BQG0 1328 aaKnown RBP13.3□□□□□ -0.28
CLSTN3-203ENST00000534830 LTBP1Q14766 1721 aa13.3□□□□□ -0.28
CLSTN3-203ENST00000534830 EIF6P56537 245 aaKnown RBP13.29□□□□□ -0.28
CLSTN3-203ENST00000534830 THUMPD2Q9BTF0 503 aaKnown RBP13.29□□□□□ -0.28
CLSTN3-203ENST00000534830 EPS15P42566 896 aa13.28□□□□□ -0.28
CLSTN3-203ENST00000534830 KLRG2A4D1S0 409 aaPredicted RBP13.27□□□□□ -0.29
CLSTN3-203ENST00000534830 TMPOP42166 694 aaKnown RBP13.27□□□□□ -0.29
CLSTN3-203ENST00000534830 BABAM1Q9NWV8 329 aa13.27□□□□□ -0.29
CLSTN3-203ENST00000534830 MAPK8IP3Q9UPT6 1336 aa13.27□□□□□ -0.29
CLSTN3-203ENST00000534830 SCNN1DP51172 638 aa13.26□□□□□ -0.29
CLSTN3-203ENST00000534830 BRPF1P55201 1214 aaPredicted RBP13.26□□□□□ -0.29
CLSTN3-203ENST00000534830 SOX10P56693 466 aa13.26□□□□□ -0.29
CLSTN3-203ENST00000534830 RIPK4P57078 832 aa13.26□□□□□ -0.29
CLSTN3-203ENST00000534830 HLFQ16534 295 aa13.26□□□□□ -0.29
CLSTN3-203ENST00000534830 ZNF652Q9Y2D9 606 aa13.26□□□□□ -0.29
CLSTN3-203ENST00000534830 FAM177BA6PVY3 158 aa13.25□□□□□ -0.29
CLSTN3-203ENST00000534830 ERVV-1B6SEH8 477 aa13.25□□□□□ -0.29
CLSTN3-203ENST00000534830 CELF2O95319 508 aaKnown RBP13.25□□□□□ -0.29
CLSTN3-203ENST00000534830 ALDH1B1P30837 517 aa13.25□□□□□ -0.29
CLSTN3-203ENST00000534830 CIAPIN1Q6FI81 312 aa13.25□□□□□ -0.29
CLSTN3-203ENST00000534830 TPTE2Q6XPS3 522 aa13.25□□□□□ -0.29
CLSTN3-203ENST00000534830 USP50Q70EL3 339 aaPredicted RBP13.25□□□□□ -0.29
CLSTN3-203ENST00000534830 LRP10Q7Z4F1 713 aa13.25□□□□□ -0.29
CLSTN3-203ENST00000534830 SAPCD2Q86UD0 394 aa13.25□□□□□ -0.29
CLSTN3-203ENST00000534830 PSMD1Q99460 953 aa13.24□□□□□ -0.29
CLSTN3-203ENST00000534830 PRKRIP1Q9H875 184 aaPredicted RBP13.24□□□□□ -0.29
CLSTN3-203ENST00000534830 ZNF408Q9H9D4 720 aa13.24□□□□□ -0.29
CLSTN3-203ENST00000534830 NIP7Q9Y221 180 aaKnown RBP eCLIP13.24□□□□□ -0.29
CLSTN3-203ENST00000534830 ERBB4Q15303 1308 aa13.23□□□□□ -0.29
CLSTN3-203ENST00000534830 MAP3K15Q6ZN16 1313 aa13.23□□□□□ -0.29
CLSTN3-203ENST00000534830 PDIA6Q15084 440 aa13.23□□□□□ -0.29
CLSTN3-203ENST00000534830 PRPF38BQ5VTL8 546 aaKnown RBP13.23□□□□□ -0.29
CLSTN3-203ENST00000534830 TTLL7Q6ZT98 887 aa13.23□□□□□ -0.29
CLSTN3-203ENST00000534830 LARGE2Q8N3Y3 721 aa13.23□□□□□ -0.29
CLSTN3-203ENST00000534830 TSPYL4Q9UJ04 414 aa13.23□□□□□ -0.29
CLSTN3-203ENST00000534830 TRIM35Q9UPQ4 493 aa13.23□□□□□ -0.29
CLSTN3-203ENST00000534830 COL4A5P29400 1685 aa13.22□□□□□ -0.29
CLSTN3-203ENST00000534830 GTF2E1P29083 439 aaPredicted RBP13.22□□□□□ -0.29
CLSTN3-203ENST00000534830 LMOD3Q0VAK6 560 aa13.22□□□□□ -0.29
CLSTN3-203ENST00000534830 RUNDC1Q96C34 613 aa13.22□□□□□ -0.29
CLSTN3-203ENST00000534830 ADAMTS8Q9UP79 889 aa13.22□□□□□ -0.29
CLSTN3-203ENST00000534830 RRP7AQ9Y3A4 280 aaKnown RBP13.22□□□□□ -0.29
CLSTN3-203ENST00000534830 CHL1O00533 1208 aa13.21□□□□□ -0.29
CLSTN3-203ENST00000534830 CCDC146Q8IYE0 955 aa13.21□□□□□ -0.29
CLSTN3-203ENST00000534830 HHIPL1Q96JK4 782 aa13.21□□□□□ -0.29
CLSTN3-203ENST00000534830 GLIS2Q9BZE0 524 aaPredicted RBP13.21□□□□□ -0.29
CLSTN3-203ENST00000534830 ADARB2Q9NS39 739 aaKnown RBP13.21□□□□□ -0.29
CLSTN3-203ENST00000534830 MYL6BP14649 208 aa13.2□□□□□ -0.3
CLSTN3-203ENST00000534830 CC2D2BQ6DHV5 1058 aa13.2□□□□□ -0.3
CLSTN3-203ENST00000534830 NIM1KQ8IY84 436 aa13.2□□□□□ -0.3
CLSTN3-203ENST00000534830 ZNF34Q8IZ26 560 aa13.2□□□□□ -0.3
CLSTN3-203ENST00000534830 NGEFQ8N5V2 710 aa13.2□□□□□ -0.3
CLSTN3-203ENST00000534830 IBTKQ9P2D0 1353 aaPredicted RBP13.2□□□□□ -0.3
CLSTN3-203ENST00000534830 UBN2Q6ZU65 1347 aa13.19□□□□□ -0.3
CLSTN3-203ENST00000534830 NOGQ13253 232 aa13.19□□□□□ -0.3
CLSTN3-203ENST00000534830 CRY2Q49AN0 593 aa13.19□□□□□ -0.3
CLSTN3-203ENST00000534830 GIGYF2Q6Y7W6 1299 aaKnown RBP13.19□□□□□ -0.3
CLSTN3-203ENST00000534830 ZIC5Q96T25 663 aa13.19□□□□□ -0.3
CLSTN3-203ENST00000534830 GPRC5DQ9NZD1 345 aa13.19□□□□□ -0.3
CLSTN3-203ENST00000534830 SNED1Q8TER0 1413 aa13.19□□□□□ -0.3
CLSTN3-203ENST00000534830 ANKRD36CQ5JPF3 1778 aa13.18□□□□□ -0.3
CLSTN3-203ENST00000534830 TCERG1O14776 1098 aaKnown RBP13.18□□□□□ -0.3
CLSTN3-203ENST00000534830 WDR43Q15061 677 aaKnown RBP eCLIP13.18□□□□□ -0.3
CLSTN3-203ENST00000534830 NEUROD2Q15784 382 aa13.18□□□□□ -0.3
CLSTN3-203ENST00000534830 PROSER3Q2NL68 480 aa13.18□□□□□ -0.3
CLSTN3-203ENST00000534830 KIF6Q6ZMV9 814 aa13.18□□□□□ -0.3
CLSTN3-203ENST00000534830 NYXQ9GZU5 481 aa13.18□□□□□ -0.3
CLSTN3-203ENST00000534830 RIC1Q4ADV7 1423 aa13.18□□□□□ -0.3
CLSTN3-203ENST00000534830 ABCC12Q96J65 1359 aa13.18□□□□□ -0.3
CLSTN3-203ENST00000534830 PPIP5K2O43314 1243 aa13.17□□□□□ -0.3
CLSTN3-203ENST00000534830 EIF2S2P20042 333 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms