RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 ABCC12Q96J65 1359 aa30.26■■■□□ 2.43
YIF1A-213ENST00000534374 HOXA10P31260 410 aaPredicted RBP30.25■■■□□ 2.43
YIF1A-213ENST00000534374 SLC10A5Q5PT55 438 aa30.25■■■□□ 2.43
YIF1A-213ENST00000534374 UTP14AQ9BVJ6 771 aaKnown RBP30.25■■■□□ 2.43
YIF1A-213ENST00000534374 APLP1P51693 650 aa30.24■■■□□ 2.43
YIF1A-213ENST00000534374 TCIRG1Q13488 830 aa30.24■■■□□ 2.43
YIF1A-213ENST00000534374 DPY19L2Q6NUT2 758 aa30.24■■■□□ 2.43
YIF1A-213ENST00000534374 RTKN2Q8IZC4 609 aa30.24■■■□□ 2.43
YIF1A-213ENST00000534374 C16orf71Q8IYS4 520 aaPredicted RBP30.23■■■□□ 2.43
YIF1A-213ENST00000534374 RBM46Q8TBY0 533 aaKnown RBP30.23■■■□□ 2.43
YIF1A-213ENST00000534374 HYPKQ9NX55 129 aa30.23■■■□□ 2.43
YIF1A-213ENST00000534374 RNF123Q5XPI4 1314 aa30.22■■■□□ 2.43
YIF1A-213ENST00000534374 CACNA1SQ13698 1873 aa30.22■■■□□ 2.43
YIF1A-213ENST00000534374 DICER1Q9UPY3 1922 aaKnown RBP30.22■■■□□ 2.43
YIF1A-213ENST00000534374 CCDC27Q2M243 656 aa30.21■■■□□ 2.43
YIF1A-213ENST00000534374 NCBP3Q53F19 620 aaKnown RBP30.21■■■□□ 2.43
YIF1A-213ENST00000534374 ANKRD13DQ6ZTN6 518 aa30.21■■■□□ 2.43
YIF1A-213ENST00000534374 RPGRQ92834 1020 aaKnown RBP30.21■■■□□ 2.43
YIF1A-213ENST00000534374 NLRP3Q96P20 1036 aa30.21■■■□□ 2.43
YIF1A-213ENST00000534374 CC2D2BQ6DHV5 1058 aa30.2■■■□□ 2.43
YIF1A-213ENST00000534374 NLRP10Q86W26 655 aa30.2■■■□□ 2.43
YIF1A-213ENST00000534374 PLBD2Q8NHP8 589 aa30.2■■■□□ 2.43
YIF1A-213ENST00000534374 CRAMP1Q96RY5 1269 aa30.2■■■□□ 2.43
YIF1A-213ENST00000534374 CHMP4AQ9BY43 222 aa30.2■■■□□ 2.43
YIF1A-213ENST00000534374 VEGFAP15692 232 aaPredicted RBP30.19■■■□□ 2.42
YIF1A-213ENST00000534374 FKBP4Q02790 459 aaKnown RBP eCLIP30.19■■■□□ 2.42
YIF1A-213ENST00000534374 RBM17Q96I25 401 aaKnown RBP30.19■■■□□ 2.42
YIF1A-213ENST00000534374 MRS2Q9HD23 443 aa30.19■■■□□ 2.42
YIF1A-213ENST00000534374 GRIPAP1Q4V328 841 aa30.17■■■□□ 2.42
YIF1A-213ENST00000534374 FSTL1Q12841 308 aa30.16■■■□□ 2.42
YIF1A-213ENST00000534374 TNRC6CQ9HCJ0 1690 aaKnown RBP30.16■■■□□ 2.42
YIF1A-213ENST00000534374 OLFM4Q6UX06 510 aa30.15■■■□□ 2.42
YIF1A-213ENST00000534374 ELL2O00472 640 aaPredicted RBP30.14■■■□□ 2.42
YIF1A-213ENST00000534374 C3orf67Q6ZVT6 689 aa30.14■■■□□ 2.42
YIF1A-213ENST00000534374 WWC1Q8IX03 1113 aa30.14■■■□□ 2.42
YIF1A-213ENST00000534374 C8orf58Q8NAV2 365 aa30.14■■■□□ 2.42
YIF1A-213ENST00000534374 TRMT112Q9UI30 125 aaKnown RBP30.14■■■□□ 2.42
YIF1A-213ENST00000534374 PSMD1Q99460 953 aa30.13■■■□□ 2.41
YIF1A-213ENST00000534374 ISCA1Q9BUE6 129 aa30.13■■■□□ 2.41
YIF1A-213ENST00000534374 TIAM2Q8IVF5 1701 aa30.13■■■□□ 2.41
YIF1A-213ENST00000534374 SYNE4Q8N205 404 aa30.12■■■□□ 2.41
YIF1A-213ENST00000534374 ZNF277Q9NRM2 450 aaPredicted RBP30.12■■■□□ 2.41
YIF1A-213ENST00000534374 SH3TC1Q8TE82 1336 aa30.12■■■□□ 2.41
YIF1A-213ENST00000534374 ANKRD36CQ5JPF3 1778 aa30.11■■■□□ 2.41
YIF1A-213ENST00000534374 POTECB2RU33 542 aa30.11■■■□□ 2.41
YIF1A-213ENST00000534374 TRIM28Q13263 835 aaKnown RBP30.11■■■□□ 2.41
YIF1A-213ENST00000534374 CCDC30Q5VVM6 783 aa30.09■■■□□ 2.41
YIF1A-213ENST00000534374 SNED1Q8TER0 1413 aa30.08■■■□□ 2.41
YIF1A-213ENST00000534374 IL16Q14005 1332 aa30.08■■■□□ 2.41
YIF1A-213ENST00000534374 HCLS1P14317 486 aaPredicted RBP30.08■■■□□ 2.41
YIF1A-213ENST00000534374 IARSP41252 1262 aaKnown RBP30.08■■■□□ 2.41
YIF1A-213ENST00000534374 SMC1BQ8NDV3 1235 aa30.08■■■□□ 2.41
YIF1A-213ENST00000534374 PPEF1O14829 653 aaPredicted RBP30.07■■■□□ 2.4
YIF1A-213ENST00000534374 BBOX1O75936 387 aa30.07■■■□□ 2.4
YIF1A-213ENST00000534374 DDNO94850 711 aaPredicted RBP30.07■■■□□ 2.4
YIF1A-213ENST00000534374 TMX4Q9H1E5 349 aaPredicted RBP30.07■■■□□ 2.4
YIF1A-213ENST00000534374 PHAXQ9H814 394 aaKnown RBP30.07■■■□□ 2.4
YIF1A-213ENST00000534374 WDR90Q96KV7 1748 aa30.07■■■□□ 2.4
YIF1A-213ENST00000534374 GOLGA2Q08379 1002 aa30.06■■■□□ 2.4
YIF1A-213ENST00000534374 RIC3Q7Z5B4 369 aa30.06■■■□□ 2.4
YIF1A-213ENST00000534374 ATP5J2-PTCD1G3V325 749 aa30.05■■■□□ 2.4
YIF1A-213ENST00000534374 TSPYL6Q8N831 410 aa30.05■■■□□ 2.4
YIF1A-213ENST00000534374 ATP6V0A2Q9Y487 856 aa30.05■■■□□ 2.4
YIF1A-213ENST00000534374 FZD9O00144 591 aa30.04■■■□□ 2.4
YIF1A-213ENST00000534374 DNAJC5GQ8N7S2 189 aa30.04■■■□□ 2.4
YIF1A-213ENST00000534374 ABCC4O15439 1325 aa30.03■■■□□ 2.4
YIF1A-213ENST00000534374 IFFO2Q5TF58 517 aa30.03■■■□□ 2.4
YIF1A-213ENST00000534374 DDX46Q7L014 1031 aaKnown RBP30.03■■■□□ 2.4
YIF1A-213ENST00000534374 TSR2Q969E8 191 aaKnown RBP30.03■■■□□ 2.4
YIF1A-213ENST00000534374 L3MBTL3Q96JM7 780 aaPredicted RBP30.03■■■□□ 2.4
YIF1A-213ENST00000534374 WDR63Q8IWG1 891 aa30.02■■■□□ 2.4
YIF1A-213ENST00000534374 JDP2Q8WYK2 163 aa30.02■■■□□ 2.4
YIF1A-213ENST00000534374 FAM89AQ96GI7 184 aa30.02■■■□□ 2.4
YIF1A-213ENST00000534374 TCERG1O14776 1098 aaKnown RBP30.01■■■□□ 2.39
YIF1A-213ENST00000534374 DDX58O95786 925 aaKnown RBP30.01■■■□□ 2.39
YIF1A-213ENST00000534374 SP8Q8IXZ3 490 aa30.01■■■□□ 2.39
YIF1A-213ENST00000534374 VPS33BQ9H267 617 aa30.01■■■□□ 2.39
YIF1A-213ENST00000534374 IQCA1LA6NCM1 817 aa30■■■□□ 2.39
YIF1A-213ENST00000534374 SF3B3Q15393 1217 aaKnown RBP30■■■□□ 2.39
YIF1A-213ENST00000534374 GRAPQ13588 217 aa29.99■■■□□ 2.39
YIF1A-213ENST00000534374 GRAPLQ8TC17 118 aaPredicted RBP29.99■■■□□ 2.39
YIF1A-213ENST00000534374 TWISTNBQ3B726 338 aaPredicted RBP29.98■■■□□ 2.39
YIF1A-213ENST00000534374 TMC4Q7Z404 712 aa29.98■■■□□ 2.39
YIF1A-213ENST00000534374 ZBTB38Q8NAP3 1195 aaPredicted RBP29.98■■■□□ 2.39
YIF1A-213ENST00000534374 CCDC191Q8NCU4 936 aa29.98■■■□□ 2.39
YIF1A-213ENST00000534374 HSP90B1P14625 803 aaKnown RBP29.97■■■□□ 2.39
YIF1A-213ENST00000534374 ZNF428Q96B54 188 aa29.97■■■□□ 2.39
YIF1A-213ENST00000534374 METTL22Q9BUU2 404 aaPredicted RBP29.97■■■□□ 2.39
YIF1A-213ENST00000534374 STK31Q9BXU1 1019 aa29.97■■■□□ 2.39
YIF1A-213ENST00000534374 ZNF541Q9H0D2 1346 aa29.96■■■□□ 2.39
YIF1A-213ENST00000534374 LAMB2P55268 1798 aa29.96■■■□□ 2.39
YIF1A-213ENST00000534374 LARGE2Q8N3Y3 721 aa29.96■■■□□ 2.39
YIF1A-213ENST00000534374 SUPT20HQ8NEM7 779 aa29.96■■■□□ 2.39
YIF1A-213ENST00000534374 MYD88Q99836 296 aa29.96■■■□□ 2.39
YIF1A-213ENST00000534374 RTFDC1Q9BY42 306 aaPredicted RBP29.96■■■□□ 2.39
YIF1A-213ENST00000534374 IRS4O14654 1257 aaPredicted RBP29.95■■■□□ 2.39
YIF1A-213ENST00000534374 KSR2Q6VAB6 950 aa29.95■■■□□ 2.39
YIF1A-213ENST00000534374 GPC2Q8N158 579 aa29.95■■■□□ 2.39
YIF1A-213ENST00000534374 EIF6P56537 245 aaKnown RBP29.94■■■□□ 2.38
YIF1A-213ENST00000534374 SCN4AP35499 1836 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms