RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 NAA15Q9BXJ9 866 aaKnown RBP14□□□□□ -0.17
AMBRA1-212ENST00000534300 SRGAP3O43295 1099 aa14□□□□□ -0.17
AMBRA1-212ENST00000534300 SPECC1Q5M775 1068 aa14□□□□□ -0.17
AMBRA1-212ENST00000534300 SAMD9LQ8IVG5 1584 aa14□□□□□ -0.17
AMBRA1-212ENST00000534300 NF2P35240 595 aa14□□□□□ -0.17
AMBRA1-212ENST00000534300 ST5P78524 1137 aa14□□□□□ -0.17
AMBRA1-212ENST00000534300 SPECC1LQ69YQ0 1117 aa14□□□□□ -0.17
AMBRA1-212ENST00000534300 ZSCAN25Q6NSZ9 544 aa14□□□□□ -0.17
AMBRA1-212ENST00000534300 FEZ1Q99689 392 aa14□□□□□ -0.17
AMBRA1-212ENST00000534300 MAP4K4O95819 1239 aaPredicted RBP13.99□□□□□ -0.17
AMBRA1-212ENST00000534300 STX1AQ16623 288 aa13.99□□□□□ -0.17
AMBRA1-212ENST00000534300 C20orf194Q5TEA3 1177 aa13.99□□□□□ -0.17
AMBRA1-212ENST00000534300 MTMR7Q9Y216 660 aa13.99□□□□□ -0.17
AMBRA1-212ENST00000534300 GLRX3O76003 335 aaKnown RBP13.99□□□□□ -0.17
AMBRA1-212ENST00000534300 GCOM1H8Y6P7 765 aaPredicted RBP13.99□□□□□ -0.17
AMBRA1-212ENST00000534300 MYZAPP0CAP1 466 aa13.99□□□□□ -0.17
AMBRA1-212ENST00000534300 ACSBG1Q96GR2 724 aa13.99□□□□□ -0.17
AMBRA1-212ENST00000534300 ZNF335Q9H4Z2 1342 aaPredicted RBP13.99□□□□□ -0.17
AMBRA1-212ENST00000534300 TTC39AQ5SRH9 613 aa13.99□□□□□ -0.17
AMBRA1-212ENST00000534300 AACSQ86V21 672 aa13.99□□□□□ -0.17
AMBRA1-212ENST00000534300 CCDC113Q9H0I3 377 aa13.99□□□□□ -0.17
AMBRA1-212ENST00000534300 ABCC11Q96J66 1382 aa13.98□□□□□ -0.17
AMBRA1-212ENST00000534300 RARSP54136 660 aaKnown RBP13.98□□□□□ -0.17
AMBRA1-212ENST00000534300 MX1P20591 662 aa13.98□□□□□ -0.17
AMBRA1-212ENST00000534300 BMP2KLQ5H9B9 411 aa13.98□□□□□ -0.17
AMBRA1-212ENST00000534300 LARP1Q6PKG0 1096 aaKnown RBP13.98□□□□□ -0.17
AMBRA1-212ENST00000534300 GIGYF2Q6Y7W6 1299 aaKnown RBP13.98□□□□□ -0.17
AMBRA1-212ENST00000534300 SKAP1Q86WV1 359 aa13.98□□□□□ -0.17
AMBRA1-212ENST00000534300 PANK2Q9BZ23 570 aa13.98□□□□□ -0.17
AMBRA1-212ENST00000534300 IL1RAPL2Q9NP60 686 aa13.98□□□□□ -0.17
AMBRA1-212ENST00000534300 YEATS4O95619 227 aa13.98□□□□□ -0.17
AMBRA1-212ENST00000534300 TMC6Q7Z403 805 aa13.98□□□□□ -0.17
AMBRA1-212ENST00000534300 FLT4P35916 1363 aa13.98□□□□□ -0.17
AMBRA1-212ENST00000534300 KIF20AO95235 890 aa13.98□□□□□ -0.17
AMBRA1-212ENST00000534300 HCLS1P14317 486 aaPredicted RBP13.98□□□□□ -0.17
AMBRA1-212ENST00000534300 CETN2P41208 172 aa13.98□□□□□ -0.17
AMBRA1-212ENST00000534300 FKBP15Q5T1M5 1219 aa13.98□□□□□ -0.17
AMBRA1-212ENST00000534300 SRRTQ9BXP5 876 aaKnown RBP13.98□□□□□ -0.17
AMBRA1-212ENST00000534300 EIF2AK4Q9P2K8 1649 aaKnown RBP13.98□□□□□ -0.17
AMBRA1-212ENST00000534300 GNG11P61952 73 aa13.97□□□□□ -0.17
AMBRA1-212ENST00000534300 ZHX3Q9H4I2 956 aa13.97□□□□□ -0.17
AMBRA1-212ENST00000534300 QTRT2Q9H974 415 aaKnown RBP13.97□□□□□ -0.17
AMBRA1-212ENST00000534300 ATP6V1AP38606 617 aa13.97□□□□□ -0.17
AMBRA1-212ENST00000534300 PPP1R42Q7Z4L9 355 aa13.97□□□□□ -0.17
AMBRA1-212ENST00000534300 PIK3C2GO75747 1445 aa13.97□□□□□ -0.17
AMBRA1-212ENST00000534300 HSPA4P34932 840 aa13.97□□□□□ -0.17
AMBRA1-212ENST00000534300 KIF1BPQ96EK5 621 aa13.97□□□□□ -0.17
AMBRA1-212ENST00000534300 TTC37Q6PGP7 1564 aa13.96□□□□□ -0.17
AMBRA1-212ENST00000534300 PCDH11XQ9BZA7 1347 aa13.96□□□□□ -0.17
AMBRA1-212ENST00000534300 PCDH11YQ9BZA8 1340 aa13.96□□□□□ -0.17
AMBRA1-212ENST00000534300 STX6O43752 255 aa13.96□□□□□ -0.17
AMBRA1-212ENST00000534300 SOGA3Q5TF21 947 aa13.96□□□□□ -0.17
AMBRA1-212ENST00000534300 RTCBQ9Y3I0 505 aaKnown RBP13.96□□□□□ -0.17
AMBRA1-212ENST00000534300 SLU7O95391 586 aaKnown RBP13.96□□□□□ -0.17
AMBRA1-212ENST00000534300 RBM5P52756 815 aaKnown RBP eCLIP13.96□□□□□ -0.17
AMBRA1-212ENST00000534300 ALDH1L2Q3SY69 923 aa13.96□□□□□ -0.17
AMBRA1-212ENST00000534300 NUP133Q8WUM0 1156 aa13.96□□□□□ -0.17
AMBRA1-212ENST00000534300 VPS36Q86VN1 386 aa13.96□□□□□ -0.18
AMBRA1-212ENST00000534300 IP6K1Q92551 441 aa13.96□□□□□ -0.18
AMBRA1-212ENST00000534300 RSPH14Q9UHP6 348 aa13.96□□□□□ -0.18
AMBRA1-212ENST00000534300 U3KPZ7 1027 aaPredicted RBP13.96□□□□□ -0.18
AMBRA1-212ENST00000534300 MBD5Q9P267 1494 aa13.96□□□□□ -0.18
AMBRA1-212ENST00000534300 RAB11FIP3O75154 756 aa13.95□□□□□ -0.18
AMBRA1-212ENST00000534300 FAM98CQ17RN3 349 aaKnown RBP13.95□□□□□ -0.18
AMBRA1-212ENST00000534300 GDPD2Q9HCC8 539 aa13.95□□□□□ -0.18
AMBRA1-212ENST00000534300 SNRPA1P09661 255 aaKnown RBP13.95□□□□□ -0.18
AMBRA1-212ENST00000534300 IKQ13123 557 aaPredicted RBP13.95□□□□□ -0.18
AMBRA1-212ENST00000534300 PRPF40BQ6NWY9 871 aaKnown RBP13.95□□□□□ -0.18
AMBRA1-212ENST00000534300 RBM27Q9P2N5 1060 aaKnown RBP13.95□□□□□ -0.18
AMBRA1-212ENST00000534300 PARP3Q9Y6F1 533 aa13.95□□□□□ -0.18
AMBRA1-212ENST00000534300 KLHL10Q6JEL2 608 aa13.95□□□□□ -0.18
AMBRA1-212ENST00000534300 FSIP1Q8NA03 581 aa13.95□□□□□ -0.18
AMBRA1-212ENST00000534300 CCDC12Q8WUD4 166 aaPredicted RBP13.95□□□□□ -0.18
AMBRA1-212ENST00000534300 SEPT11Q9NVA2 429 aaKnown RBP13.95□□□□□ -0.18
AMBRA1-212ENST00000534300 OGFRQ9NZT2 677 aa13.95□□□□□ -0.18
AMBRA1-212ENST00000534300 EXOC6BQ9Y2D4 811 aa13.95□□□□□ -0.18
AMBRA1-212ENST00000534300 RBM25P49756 843 aaKnown RBP13.95□□□□□ -0.18
AMBRA1-212ENST00000534300 HYPKQ9NX55 129 aa13.95□□□□□ -0.18
AMBRA1-212ENST00000534300 PRAG1Q86YV5 1406 aa13.95□□□□□ -0.18
AMBRA1-212ENST00000534300 NKTRP30414 1462 aaKnown RBP13.94□□□□□ -0.18
AMBRA1-212ENST00000534300 TMPOP42166 694 aaKnown RBP13.94□□□□□ -0.18
AMBRA1-212ENST00000534300 TUBB4BP68371 445 aa13.94□□□□□ -0.18
AMBRA1-212ENST00000534300 HLTFQ14527 1009 aaKnown RBP eCLIP13.94□□□□□ -0.18
AMBRA1-212ENST00000534300 BCCIPQ9P287 314 aaKnown RBP eCLIP13.94□□□□□ -0.18
AMBRA1-212ENST00000534300 HMGB1P09429 215 aaKnown RBP13.94□□□□□ -0.18
AMBRA1-212ENST00000534300 C8orf76Q96K31 380 aa13.94□□□□□ -0.18
AMBRA1-212ENST00000534300 NUP88Q99567 741 aaPredicted RBP13.94□□□□□ -0.18
AMBRA1-212ENST00000534300 UBAC1Q9BSL1 405 aa13.94□□□□□ -0.18
AMBRA1-212ENST00000534300 SIL1Q9H173 461 aa13.94□□□□□ -0.18
AMBRA1-212ENST00000534300 SKILP12757 684 aa13.94□□□□□ -0.18
AMBRA1-212ENST00000534300 CACNA2D4Q7Z3S7 1137 aa13.94□□□□□ -0.18
AMBRA1-212ENST00000534300 FAM200AQ8TCP9 573 aa13.94□□□□□ -0.18
AMBRA1-212ENST00000534300 ALS2CR12Q96Q35 445 aa13.94□□□□□ -0.18
AMBRA1-212ENST00000534300 CEP126Q9P2H0 1117 aa13.94□□□□□ -0.18
AMBRA1-212ENST00000534300 TRMT112Q9UI30 125 aaKnown RBP13.94□□□□□ -0.18
AMBRA1-212ENST00000534300 ERVK-7P63135 1459 aa13.94□□□□□ -0.18
AMBRA1-212ENST00000534300 CCDC186Q7Z3E2 898 aa13.93□□□□□ -0.18
AMBRA1-212ENST00000534300 EHBP1Q8NDI1 1231 aa13.93□□□□□ -0.18
AMBRA1-212ENST00000534300 ZNF622Q969S3 477 aaKnown RBP eCLIP13.93□□□□□ -0.186e-7■■■■■ 27
AMBRA1-212ENST00000534300 CAPN2P17655 700 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms