RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 JDP2Q8WYK2 163 aa22.18■■□□□ 1.14
CAPRIN1-216ENST00000534042 MKRN1Q9UHC7 482 aaKnown RBP22.18■■□□□ 1.14
CAPRIN1-216ENST00000534042 RIC1Q4ADV7 1423 aa22.17■■□□□ 1.14
CAPRIN1-216ENST00000534042 EIF2S2P20042 333 aaKnown RBP22.17■■□□□ 1.14
CAPRIN1-216ENST00000534042 PPP1R42Q7Z4L9 355 aa22.17■■□□□ 1.14
CAPRIN1-216ENST00000534042 RBM17Q96I25 401 aaKnown RBP22.17■■□□□ 1.14
CAPRIN1-216ENST00000534042 CLEC11AQ9Y240 323 aa22.17■■□□□ 1.14
CAPRIN1-216ENST00000534042 PASKQ96RG2 1323 aa22.16■■□□□ 1.14
CAPRIN1-216ENST00000534042 NTSR2O95665 410 aa22.16■■□□□ 1.14
CAPRIN1-216ENST00000534042 EPHX2P34913 555 aa22.16■■□□□ 1.14
CAPRIN1-216ENST00000534042 GRIPAP1Q4V328 841 aa22.16■■□□□ 1.14
CAPRIN1-216ENST00000534042 PARP10Q53GL7 1025 aa22.16■■□□□ 1.14
CAPRIN1-216ENST00000534042 CRAMP1Q96RY5 1269 aa22.16■■□□□ 1.14
CAPRIN1-216ENST00000534042 BABAM1Q9NWV8 329 aa22.16■■□□□ 1.14
CAPRIN1-216ENST00000534042 SNED1Q8TER0 1413 aa22.15■■□□□ 1.14
CAPRIN1-216ENST00000534042 LMOD3Q0VAK6 560 aa22.15■■□□□ 1.14
CAPRIN1-216ENST00000534042 TNS4Q8IZW8 715 aa22.15■■□□□ 1.14
CAPRIN1-216ENST00000534042 GPC2Q8N158 579 aa22.15■■□□□ 1.14
CAPRIN1-216ENST00000534042 RNF123Q5XPI4 1314 aa22.14■■□□□ 1.14
CAPRIN1-216ENST00000534042 TMPOP42166 694 aaKnown RBP22.14■■□□□ 1.13
CAPRIN1-216ENST00000534042 EIF6P56537 245 aaKnown RBP22.14■■□□□ 1.13
CAPRIN1-216ENST00000534042 PDIA6Q15084 440 aa22.14■■□□□ 1.13
CAPRIN1-216ENST00000534042 PNMA8AQ86V59 439 aaPredicted RBP22.14■■□□□ 1.13
CAPRIN1-216ENST00000534042 PPEF1O14829 653 aaPredicted RBP22.13■■□□□ 1.13
CAPRIN1-216ENST00000534042 ITGBL1O95965 494 aaPredicted RBP22.13■■□□□ 1.13
CAPRIN1-216ENST00000534042 LRP10Q7Z4F1 713 aa22.13■■□□□ 1.13
CAPRIN1-216ENST00000534042 NLRP3Q96P20 1036 aa22.13■■□□□ 1.13
CAPRIN1-216ENST00000534042 TCERG1O14776 1098 aaKnown RBP22.12■■□□□ 1.13
CAPRIN1-216ENST00000534042 ANXA1P04083 346 aa22.12■■□□□ 1.13
CAPRIN1-216ENST00000534042 LARGE2Q8N3Y3 721 aa22.12■■□□□ 1.13
CAPRIN1-216ENST00000534042 UTP14AQ9BVJ6 771 aaKnown RBP22.12■■□□□ 1.13
CAPRIN1-216ENST00000534042 PCNTO95613 3336 aa22.11■■□□□ 1.13
CAPRIN1-216ENST00000534042 TMEM88BA6NKF7 163 aa22.11■■□□□ 1.13
CAPRIN1-216ENST00000534042 PROSER3Q2NL68 480 aa22.11■■□□□ 1.13
CAPRIN1-216ENST00000534042 C3orf67Q6ZVT6 689 aa22.11■■□□□ 1.13
CAPRIN1-216ENST00000534042 TMX4Q9H1E5 349 aaPredicted RBP22.11■■□□□ 1.13
CAPRIN1-216ENST00000534042 GJA3Q9Y6H8 435 aa22.11■■□□□ 1.13
CAPRIN1-216ENST00000534042 CNTNAP1P78357 1384 aa22.11■■□□□ 1.13
CAPRIN1-216ENST00000534042 SLC10A5Q5PT55 438 aa22.1■■□□□ 1.13
CAPRIN1-216ENST00000534042 LMOD1P29536 600 aaPredicted RBP22.09■■□□□ 1.13
CAPRIN1-216ENST00000534042 NEUROD2Q15784 382 aa22.09■■□□□ 1.13
CAPRIN1-216ENST00000534042 HSP90AB3PQ58FF7 597 aa22.09■■□□□ 1.13
CAPRIN1-216ENST00000534042 CNTROBQ8N137 903 aa22.09■■□□□ 1.13
CAPRIN1-216ENST00000534042 NECTIN2Q92692 538 aa22.09■■□□□ 1.13
CAPRIN1-216ENST00000534042 ADAMTSL1Q8N6G6 1762 aa22.09■■□□□ 1.13
CAPRIN1-216ENST00000534042 COL4A5P29400 1685 aa22.08■■□□□ 1.13
CAPRIN1-216ENST00000534042 CAPN15O75808 1086 aa22.08■■□□□ 1.13
CAPRIN1-216ENST00000534042 AIMP1Q12904 312 aaKnown RBP22.08■■□□□ 1.13
CAPRIN1-216ENST00000534042 MAP1SQ66K74 1059 aaPredicted RBP22.08■■□□□ 1.13
CAPRIN1-216ENST00000534042 COPS6Q7L5N1 327 aa22.08■■□□□ 1.13
CAPRIN1-216ENST00000534042 SLC51AQ86UW1 340 aa22.07■■□□□ 1.12
CAPRIN1-216ENST00000534042 NIM1KQ8IY84 436 aa22.07■■□□□ 1.12
CAPRIN1-216ENST00000534042 CCDC146Q8IYE0 955 aa22.07■■□□□ 1.12
CAPRIN1-216ENST00000534042 XAGE3Q8WTP9 111 aa22.07■■□□□ 1.12
CAPRIN1-216ENST00000534042 ATP6V0A2Q9Y487 856 aa22.07■■□□□ 1.12
CAPRIN1-216ENST00000534042 MYBBP1AQ9BQG0 1328 aaKnown RBP22.06■■□□□ 1.12
CAPRIN1-216ENST00000534042 PPIP5K2O43314 1243 aa22.06■■□□□ 1.12
CAPRIN1-216ENST00000534042 DDX10Q13206 875 aaKnown RBP22.06■■□□□ 1.12
CAPRIN1-216ENST00000534042 ANKRD36CQ5JPF3 1778 aa22.06■■□□□ 1.12
CAPRIN1-216ENST00000534042 CHL1O00533 1208 aa22.05■■□□□ 1.12
CAPRIN1-216ENST00000534042 VEGFBP49765 207 aa22.05■■□□□ 1.12
CAPRIN1-216ENST00000534042 NLRP10Q86W26 655 aa22.05■■□□□ 1.12
CAPRIN1-216ENST00000534042 DDX21Q9NR30 783 aaKnown RBP eCLIP22.05■■□□□ 1.12
CAPRIN1-216ENST00000534042 LAS1LQ9Y4W2 734 aaKnown RBP22.05■■□□□ 1.12
CAPRIN1-216ENST00000534042 ABCC4O15439 1325 aa22.05■■□□□ 1.12
CAPRIN1-216ENST00000534042 TCIRG1Q13488 830 aa22.04■■□□□ 1.12
CAPRIN1-216ENST00000534042 RUNDC1Q96C34 613 aa22.04■■□□□ 1.12
CAPRIN1-216ENST00000534042 VPS33BQ9H267 617 aa22.04■■□□□ 1.12
CAPRIN1-216ENST00000534042 BBOX1O75936 387 aa22.03■■□□□ 1.12
CAPRIN1-216ENST00000534042 HCLS1P14317 486 aaPredicted RBP22.03■■□□□ 1.12
CAPRIN1-216ENST00000534042 EPS15P42566 896 aa22.03■■□□□ 1.12
CAPRIN1-216ENST00000534042 SCNN1DP51172 638 aa22.03■■□□□ 1.12
CAPRIN1-216ENST00000534042 WDR43Q15061 677 aaKnown RBP eCLIP22.03■■□□□ 1.12
CAPRIN1-216ENST00000534042 AOC3Q16853 763 aa22.03■■□□□ 1.12
CAPRIN1-216ENST00000534042 KRT24Q2M2I5 525 aa22.03■■□□□ 1.12
CAPRIN1-216ENST00000534042 SUPT20HQ8NEM7 779 aa22.03■■□□□ 1.12
CAPRIN1-216ENST00000534042 TRMT112Q9UI30 125 aaKnown RBP22.03■■□□□ 1.12
CAPRIN1-216ENST00000534042 FOXN1O15353 648 aa22.02■■□□□ 1.12
CAPRIN1-216ENST00000534042 SP8Q8IXZ3 490 aa22.02■■□□□ 1.12
CAPRIN1-216ENST00000534042 LTBP1Q14766 1721 aa22.02■■□□□ 1.12
CAPRIN1-216ENST00000534042 LAMB2P55268 1798 aa22.02■■□□□ 1.11
CAPRIN1-216ENST00000534042 DEFB115Q30KQ5 88 aa22.01■■□□□ 1.11
CAPRIN1-216ENST00000534042 DDX46Q7L014 1031 aaKnown RBP22.01■■□□□ 1.11
CAPRIN1-216ENST00000534042 AIDAQ96BJ3 306 aa22.01■■□□□ 1.11
CAPRIN1-216ENST00000534042 RTFDC1Q9BY42 306 aaPredicted RBP22.01■■□□□ 1.11
CAPRIN1-216ENST00000534042 TRIM35Q9UPQ4 493 aa22.01■■□□□ 1.11
CAPRIN1-216ENST00000534042 SH3TC1Q8TE82 1336 aa22.01■■□□□ 1.11
CAPRIN1-216ENST00000534042 RASSF10A6NK89 507 aa22■■□□□ 1.11
CAPRIN1-216ENST00000534042 DPP8Q6V1X1 898 aaPredicted RBP22■■□□□ 1.11
CAPRIN1-216ENST00000534042 USP50Q70EL3 339 aaPredicted RBP22■■□□□ 1.11
CAPRIN1-216ENST00000534042 MPNDQ8N594 471 aa22■■□□□ 1.11
CAPRIN1-216ENST00000534042 CHPF2Q9P2E5 772 aa22■■□□□ 1.11
CAPRIN1-216ENST00000534042 ZNRF3Q9ULT6 936 aa22■■□□□ 1.11
CAPRIN1-216ENST00000534042 ABT1Q9ULW3 272 aaKnown RBP22■■□□□ 1.11
CAPRIN1-216ENST00000534042 HDGFL1Q5TGJ6 251 aa21.99■■□□□ 1.11
CAPRIN1-216ENST00000534042 HOXB7P09629 217 aa21.98■■□□□ 1.11
CAPRIN1-216ENST00000534042 CXCL9Q07325 125 aa21.98■■□□□ 1.11
CAPRIN1-216ENST00000534042 GRAPQ13588 217 aa21.98■■□□□ 1.11
CAPRIN1-216ENST00000534042 PLBD2Q8NHP8 589 aa21.98■■□□□ 1.11
CAPRIN1-216ENST00000534042 GRAPLQ8TC17 118 aaPredicted RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms