RNA–Protein interactions for RNA: ENST00000533943.1

MRPL49-208, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 3

Gene MRPL49, Length 688 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-208ENST00000533943 CCDC30Q5VVM6 783 aa20.83■□□□□ 0.93
MRPL49-208ENST00000533943 TSPYL6Q8N831 410 aa20.83■□□□□ 0.93
MRPL49-208ENST00000533943 ZNF219Q9P2Y4 722 aaPredicted RBP20.83■□□□□ 0.93
MRPL49-208ENST00000533943 ZC3H4Q9UPT8 1303 aaKnown RBP20.82■□□□□ 0.92
MRPL49-208ENST00000533943 PRELPP51888 382 aa20.82■□□□□ 0.92
MRPL49-208ENST00000533943 HOXA10P31260 410 aaPredicted RBP20.81■□□□□ 0.92
MRPL49-208ENST00000533943 C1QTNF8P60827 252 aa20.81■□□□□ 0.92
MRPL49-208ENST00000533943 SALL2Q9Y467 1007 aaPredicted RBP20.81■□□□□ 0.92
MRPL49-208ENST00000533943 LTBP3Q9NS15 1303 aa20.8■□□□□ 0.92
MRPL49-208ENST00000533943 NLRP3Q96P20 1036 aa20.8■□□□□ 0.92
MRPL49-208ENST00000533943 ISCA1Q9BUE6 129 aa20.8■□□□□ 0.92
MRPL49-208ENST00000533943 SLX4Q8IY92 1834 aa20.79■□□□□ 0.92
MRPL49-208ENST00000533943 GOLGA2Q08379 1002 aa20.79■□□□□ 0.92
MRPL49-208ENST00000533943 TRIM28Q13263 835 aaKnown RBP20.79■□□□□ 0.92
MRPL49-208ENST00000533943 CCDC93Q567U6 631 aa20.79■□□□□ 0.92
MRPL49-208ENST00000533943 RPGRQ92834 1020 aaKnown RBP20.79■□□□□ 0.92
MRPL49-208ENST00000533943 TAOK3Q9H2K8 898 aa20.79■□□□□ 0.92
MRPL49-208ENST00000533943 PHAXQ9H814 394 aaKnown RBP20.79■□□□□ 0.92
MRPL49-208ENST00000533943 TWISTNBQ3B726 338 aaPredicted RBP20.78■□□□□ 0.92
MRPL49-208ENST00000533943 C3orf67Q6ZVT6 689 aa20.78■□□□□ 0.92
MRPL49-208ENST00000533943 CRAMP1Q96RY5 1269 aa20.78■□□□□ 0.92
MRPL49-208ENST00000533943 TRMT112Q9UI30 125 aaKnown RBP20.78■□□□□ 0.92
MRPL49-208ENST00000533943 SH3TC1Q8TE82 1336 aa20.78■□□□□ 0.92
MRPL49-208ENST00000533943 FANCIQ9NVI1 1328 aa20.78■□□□□ 0.92
MRPL49-208ENST00000533943 TNRC6CQ9HCJ0 1690 aaKnown RBP20.77■□□□□ 0.92
MRPL49-208ENST00000533943 RIC3Q7Z5B4 369 aa20.77■□□□□ 0.92
MRPL49-208ENST00000533943 RBM17Q96I25 401 aaKnown RBP20.77■□□□□ 0.92
MRPL49-208ENST00000533943 KDM2BQ8NHM5 1336 aa20.77■□□□□ 0.91
MRPL49-208ENST00000533943 ATP5J2-PTCD1G3V325 749 aa20.76■□□□□ 0.91
MRPL49-208ENST00000533943 KIF3CO14782 793 aa20.76■□□□□ 0.91
MRPL49-208ENST00000533943 RTKN2Q8IZC4 609 aa20.76■□□□□ 0.91
MRPL49-208ENST00000533943 ARFGEF2Q9Y6D5 1785 aa20.76■□□□□ 0.91
MRPL49-208ENST00000533943 SBF1O95248 1867 aa20.75■□□□□ 0.91
MRPL49-208ENST00000533943 DDX58O95786 925 aaKnown RBP20.75■□□□□ 0.91
MRPL49-208ENST00000533943 CC2D2BQ6DHV5 1058 aa20.75■□□□□ 0.91
MRPL49-208ENST00000533943 SYNE4Q8N205 404 aa20.75■□□□□ 0.91
MRPL49-208ENST00000533943 STK31Q9BXU1 1019 aa20.75■□□□□ 0.91
MRPL49-208ENST00000533943 HCLS1P14317 486 aaPredicted RBP20.74■□□□□ 0.91
MRPL49-208ENST00000533943 NMRK2Q9NPI5 230 aa20.74■□□□□ 0.91
MRPL49-208ENST00000533943 ANKRD36CQ5JPF3 1778 aa20.74■□□□□ 0.91
MRPL49-208ENST00000533943 FER1L6Q2WGJ9 1857 aa20.73■□□□□ 0.91
MRPL49-208ENST00000533943 FKBP4Q02790 459 aaKnown RBP eCLIP20.73■□□□□ 0.91
MRPL49-208ENST00000533943 OLFM4Q6UX06 510 aa20.73■□□□□ 0.91
MRPL49-208ENST00000533943 GLTPD2A6NH11 291 aa20.72■□□□□ 0.91
MRPL49-208ENST00000533943 GRIPAP1Q4V328 841 aa20.72■□□□□ 0.91
MRPL49-208ENST00000533943 MYH16Q9H6N6 1097 aa20.72■□□□□ 0.91
MRPL49-208ENST00000533943 SPINK5Q9NQ38 1064 aaPredicted RBP20.72■□□□□ 0.91
MRPL49-208ENST00000533943 CCER2I3L3R5 266 aa20.71■□□□□ 0.91
MRPL49-208ENST00000533943 VAMP4O75379 141 aa20.71■□□□□ 0.91
MRPL49-208ENST00000533943 EXOSC9Q06265 439 aaKnown RBP20.71■□□□□ 0.91
MRPL49-208ENST00000533943 FAM89AQ96GI7 184 aa20.71■□□□□ 0.91
MRPL49-208ENST00000533943 MYD88Q99836 296 aa20.71■□□□□ 0.91
MRPL49-208ENST00000533943 METTL22Q9BUU2 404 aaPredicted RBP20.71■□□□□ 0.91
MRPL49-208ENST00000533943 ZNF521Q96K83 1311 aa20.71■□□□□ 0.91
MRPL49-208ENST00000533943 TCERG1O14776 1098 aaKnown RBP20.7■□□□□ 0.9
MRPL49-208ENST00000533943 PPEF1O14829 653 aaPredicted RBP20.7■□□□□ 0.9
MRPL49-208ENST00000533943 SLC4A2P04920 1241 aa20.7■□□□□ 0.9
MRPL49-208ENST00000533943 KSR2Q6VAB6 950 aa20.7■□□□□ 0.9
MRPL49-208ENST00000533943 CCDC191Q8NCU4 936 aa20.7■□□□□ 0.9
MRPL49-208ENST00000533943 ZNF428Q96B54 188 aa20.7■□□□□ 0.9
MRPL49-208ENST00000533943 PSMD1Q99460 953 aa20.7■□□□□ 0.9
MRPL49-208ENST00000533943 SNED1Q8TER0 1413 aa20.7■□□□□ 0.9
MRPL49-208ENST00000533943 BBOX1O75936 387 aa20.69■□□□□ 0.9
MRPL49-208ENST00000533943 DPY19L2Q6NUT2 758 aa20.69■□□□□ 0.9
MRPL49-208ENST00000533943 ZBTB38Q8NAP3 1195 aaPredicted RBP20.69■□□□□ 0.9
MRPL49-208ENST00000533943 ZNF277Q9NRM2 450 aaPredicted RBP20.69■□□□□ 0.9
MRPL49-208ENST00000533943 MAP3K2Q9Y2U5 619 aa20.69■□□□□ 0.9
MRPL49-208ENST00000533943 ABCC4O15439 1325 aa20.69■□□□□ 0.9
MRPL49-208ENST00000533943 PI4KAP2A4QPH2 592 aa20.68■□□□□ 0.9
MRPL49-208ENST00000533943 TOMM70O94826 608 aa20.68■□□□□ 0.9
MRPL49-208ENST00000533943 SF3B3Q15393 1217 aaKnown RBP20.68■□□□□ 0.9
MRPL49-208ENST00000533943 DDX46Q7L014 1031 aaKnown RBP20.68■□□□□ 0.9
MRPL49-208ENST00000533943 PI4KAP1Q8N8J0 262 aa20.68■□□□□ 0.9
MRPL49-208ENST00000533943 RRAGCQ9HB90 399 aa20.68■□□□□ 0.9
MRPL49-208ENST00000533943 ATP6V0A2Q9Y487 856 aa20.68■□□□□ 0.9
MRPL49-208ENST00000533943 CACNA1SQ13698 1873 aa20.68■□□□□ 0.9
MRPL49-208ENST00000533943 IRS4O14654 1257 aaPredicted RBP20.67■□□□□ 0.9
MRPL49-208ENST00000533943 HSP90B1P14625 803 aaKnown RBP20.67■□□□□ 0.9
MRPL49-208ENST00000533943 G2E3Q7L622 706 aa20.67■□□□□ 0.9
MRPL49-208ENST00000533943 TMX4Q9H1E5 349 aaPredicted RBP20.67■□□□□ 0.9
MRPL49-208ENST00000533943 CWC25Q9NXE8 425 aaPredicted RBP20.67■□□□□ 0.9
MRPL49-208ENST00000533943 PCCAP05165 728 aaPredicted RBP20.66■□□□□ 0.9
MRPL49-208ENST00000533943 GRAPQ13588 217 aa20.66■□□□□ 0.9
MRPL49-208ENST00000533943 GRAPLQ8TC17 118 aaPredicted RBP20.66■□□□□ 0.9
MRPL49-208ENST00000533943 VEGFAP15692 232 aaPredicted RBP20.65■□□□□ 0.9
MRPL49-208ENST00000533943 IARSP41252 1262 aaKnown RBP20.65■□□□□ 0.9
MRPL49-208ENST00000533943 FLIIQ13045 1269 aa20.65■□□□□ 0.9
MRPL49-208ENST00000533943 RTL5Q5HYW3 569 aaPredicted RBP20.65■□□□□ 0.9
MRPL49-208ENST00000533943 SP8Q8IXZ3 490 aa20.65■□□□□ 0.9
MRPL49-208ENST00000533943 IGKV5-2P06315 115 aa20.64■□□□□ 0.89
MRPL49-208ENST00000533943 NEXNQ0ZGT2 675 aa20.64■□□□□ 0.89
MRPL49-208ENST00000533943 TMC4Q7Z404 712 aa20.64■□□□□ 0.89
MRPL49-208ENST00000533943 C16orf71Q8IYS4 520 aaPredicted RBP20.64■□□□□ 0.89
MRPL49-208ENST00000533943 TIAM2Q8IVF5 1701 aa20.64■□□□□ 0.89
MRPL49-208ENST00000533943 CCDC88AQ3V6T2 1871 aa20.63■□□□□ 0.89
MRPL49-208ENST00000533943 SLC51AQ86UW1 340 aa20.63■□□□□ 0.89
MRPL49-208ENST00000533943 RBM46Q8TBY0 533 aaKnown RBP20.63■□□□□ 0.89
MRPL49-208ENST00000533943 DICER1Q9UPY3 1922 aaKnown RBP20.63■□□□□ 0.89
MRPL49-208ENST00000533943 E9PSI1 815 aa20.61■□□□□ 0.89
MRPL49-208ENST00000533943 FKBP5Q13451 457 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms