RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 CFAP44Q96MT7 982 aa16.17■□□□□ 0.18
CAPRIN1-213ENST00000533562 NLRP3Q96P20 1036 aa16.17■□□□□ 0.18
CAPRIN1-213ENST00000533562 ZNF277Q9NRM2 450 aaPredicted RBP16.17■□□□□ 0.18
CAPRIN1-213ENST00000533562 CACNA1SQ13698 1873 aa16.16■□□□□ 0.18
CAPRIN1-213ENST00000533562 ABCC12Q96J65 1359 aa16.16■□□□□ 0.18
CAPRIN1-213ENST00000533562 ARFGEF2Q9Y6D5 1785 aa16.16■□□□□ 0.18
CAPRIN1-213ENST00000533562 DDNO94850 711 aaPredicted RBP16.16■□□□□ 0.18
CAPRIN1-213ENST00000533562 HOXB7P09629 217 aa16.16■□□□□ 0.18
CAPRIN1-213ENST00000533562 OLFM4Q6UX06 510 aa16.16■□□□□ 0.18
CAPRIN1-213ENST00000533562 SYNE4Q8N205 404 aa16.16■□□□□ 0.18
CAPRIN1-213ENST00000533562 XAGE3Q8WTP9 111 aa16.16■□□□□ 0.18
CAPRIN1-213ENST00000533562 CRAMP1Q96RY5 1269 aa16.16■□□□□ 0.18
CAPRIN1-213ENST00000533562 TMX4Q9H1E5 349 aaPredicted RBP16.16■□□□□ 0.18
CAPRIN1-213ENST00000533562 TIAM2Q8IVF5 1701 aa16.16■□□□□ 0.18
CAPRIN1-213ENST00000533562 CALD1Q05682 793 aaKnown RBP16.15■□□□□ 0.18
CAPRIN1-213ENST00000533562 KRT24Q2M2I5 525 aa16.15■□□□□ 0.18
CAPRIN1-213ENST00000533562 RIC1Q4ADV7 1423 aa16.15■□□□□ 0.18
CAPRIN1-213ENST00000533562 SLC10A5Q5PT55 438 aa16.15■□□□□ 0.18
CAPRIN1-213ENST00000533562 HDGFL1Q5TGJ6 251 aa16.15■□□□□ 0.18
CAPRIN1-213ENST00000533562 PSMD1Q99460 953 aa16.15■□□□□ 0.18
CAPRIN1-213ENST00000533562 PCNTO95613 3336 aa16.15■□□□□ 0.18
CAPRIN1-213ENST00000533562 RNF123Q5XPI4 1314 aa16.15■□□□□ 0.18
CAPRIN1-213ENST00000533562 IQCA1LA6NCM1 817 aa16.14■□□□□ 0.17
CAPRIN1-213ENST00000533562 APAF1O14727 1248 aa16.14■□□□□ 0.17
CAPRIN1-213ENST00000533562 ZEB1P37275 1124 aaPredicted RBP16.14■□□□□ 0.17
CAPRIN1-213ENST00000533562 IARSP41252 1262 aaKnown RBP16.14■□□□□ 0.17
CAPRIN1-213ENST00000533562 TCIRG1Q13488 830 aa16.14■□□□□ 0.17
CAPRIN1-213ENST00000533562 DBF4Q9UBU7 674 aaPredicted RBP16.14■□□□□ 0.17
CAPRIN1-213ENST00000533562 JDP2Q8WYK2 163 aa16.13■□□□□ 0.17
CAPRIN1-213ENST00000533562 CHPF2Q9P2E5 772 aa16.13■□□□□ 0.17
CAPRIN1-213ENST00000533562 WDR90Q96KV7 1748 aa16.13■□□□□ 0.17
CAPRIN1-213ENST00000533562 HTRA3P83110 453 aa16.12■□□□□ 0.17
CAPRIN1-213ENST00000533562 DUSP27Q5VZP5 1158 aa16.12■□□□□ 0.17
CAPRIN1-213ENST00000533562 ANKRD13DQ6ZTN6 518 aa16.12■□□□□ 0.17
CAPRIN1-213ENST00000533562 NLRP10Q86W26 655 aa16.12■□□□□ 0.17
CAPRIN1-213ENST00000533562 L3MBTL3Q96JM7 780 aaPredicted RBP16.12■□□□□ 0.17
CAPRIN1-213ENST00000533562 MBIPQ9NS73 344 aa16.12■□□□□ 0.17
CAPRIN1-213ENST00000533562 HYPKQ9NX55 129 aa16.12■□□□□ 0.17
CAPRIN1-213ENST00000533562 TRMT112Q9UI30 125 aaKnown RBP16.12■□□□□ 0.17
CAPRIN1-213ENST00000533562 FZD9O00144 591 aa16.11■□□□□ 0.17
CAPRIN1-213ENST00000533562 PPEF1O14829 653 aaPredicted RBP16.11■□□□□ 0.17
CAPRIN1-213ENST00000533562 GNAI1P63096 354 aa16.11■□□□□ 0.17
CAPRIN1-213ENST00000533562 CHADLQ6NUI6 762 aa16.11■□□□□ 0.17
CAPRIN1-213ENST00000533562 PPP4R3CPQ6ZMV5 832 aa16.11■□□□□ 0.17
CAPRIN1-213ENST00000533562 PLBD2Q8NHP8 589 aa16.11■□□□□ 0.17
CAPRIN1-213ENST00000533562 KLRG1Q96E93 195 aa16.11■□□□□ 0.17
CAPRIN1-213ENST00000533562 IFT57Q9NWB7 429 aa16.11■□□□□ 0.17
CAPRIN1-213ENST00000533562 TCERG1O14776 1098 aaKnown RBP16.1■□□□□ 0.17
CAPRIN1-213ENST00000533562 BBOX1O75936 387 aa16.1■□□□□ 0.17
CAPRIN1-213ENST00000533562 ZNF853P0CG23 659 aa16.1■□□□□ 0.17
CAPRIN1-213ENST00000533562 C3orf67Q6ZVT6 689 aa16.1■□□□□ 0.17
CAPRIN1-213ENST00000533562 CHMP4AQ9BY43 222 aa16.1■□□□□ 0.17
CAPRIN1-213ENST00000533562 SH3TC1Q8TE82 1336 aa16.1■□□□□ 0.17
CAPRIN1-213ENST00000533562 HCLS1P14317 486 aaPredicted RBP16.09■□□□□ 0.17
CAPRIN1-213ENST00000533562 GPC2Q8N158 579 aa16.09■□□□□ 0.17
CAPRIN1-213ENST00000533562 TAF1DQ9H5J8 278 aaPredicted RBP16.09■□□□□ 0.17
CAPRIN1-213ENST00000533562 EIF6P56537 245 aaKnown RBP16.08■□□□□ 0.16
CAPRIN1-213ENST00000533562 DDX46Q7L014 1031 aaKnown RBP16.08■□□□□ 0.16
CAPRIN1-213ENST00000533562 LDHDQ86WU2 507 aa16.08■□□□□ 0.16
CAPRIN1-213ENST00000533562 LARGE2Q8N3Y3 721 aa16.08■□□□□ 0.16
CAPRIN1-213ENST00000533562 VPS33BQ9H267 617 aa16.08■□□□□ 0.16
CAPRIN1-213ENST00000533562 HACL1Q9UJ83 578 aa16.08■□□□□ 0.16
CAPRIN1-213ENST00000533562 ATP6V0A2Q9Y487 856 aa16.08■□□□□ 0.16
CAPRIN1-213ENST00000533562 ZNF541Q9H0D2 1346 aa16.08■□□□□ 0.16
CAPRIN1-213ENST00000533562 ABCC4O15439 1325 aa16.07■□□□□ 0.16
CAPRIN1-213ENST00000533562 SNED1Q8TER0 1413 aa16.06■□□□□ 0.16
CAPRIN1-213ENST00000533562 ELL2O00472 640 aaPredicted RBP16.06■□□□□ 0.16
CAPRIN1-213ENST00000533562 PNMA8AQ86V59 439 aaPredicted RBP16.06■□□□□ 0.16
CAPRIN1-213ENST00000533562 SP8Q8IXZ3 490 aa16.06■□□□□ 0.16
CAPRIN1-213ENST00000533562 JMYQ8N9B5 988 aa16.06■□□□□ 0.16
CAPRIN1-213ENST00000533562 SUPT20HQ8NEM7 779 aa16.06■□□□□ 0.16
CAPRIN1-213ENST00000533562 ISCA1Q9BUE6 129 aa16.06■□□□□ 0.16
CAPRIN1-213ENST00000533562 POTEIP0CG38 1075 aa16.05■□□□□ 0.16
CAPRIN1-213ENST00000533562 POTEJP0CG39 1038 aa16.05■□□□□ 0.16
CAPRIN1-213ENST00000533562 EPHX2P34913 555 aa16.05■□□□□ 0.16
CAPRIN1-213ENST00000533562 GOLGA2Q08379 1002 aa16.05■□□□□ 0.16
CAPRIN1-213ENST00000533562 TRIM28Q13263 835 aaKnown RBP16.05■□□□□ 0.16
CAPRIN1-213ENST00000533562 EAPPQ56P03 285 aaPredicted RBP16.05■□□□□ 0.16
CAPRIN1-213ENST00000533562 RIC3Q7Z5B4 369 aa16.05■□□□□ 0.16
CAPRIN1-213ENST00000533562 NIM1KQ8IY84 436 aa16.05■□□□□ 0.16
CAPRIN1-213ENST00000533562 CLEC11AQ9Y240 323 aa16.05■□□□□ 0.16
CAPRIN1-213ENST00000533562 GJA3Q9Y6H8 435 aa16.05■□□□□ 0.16
CAPRIN1-213ENST00000533562 SCN4AP35499 1836 aa16.05■□□□□ 0.16
CAPRIN1-213ENST00000533562 ATP5J2-PTCD1G3V325 749 aa16.04■□□□□ 0.16
CAPRIN1-213ENST00000533562 PPIP5K2O43314 1243 aa16.04■□□□□ 0.16
CAPRIN1-213ENST00000533562 GRAPQ13588 217 aa16.04■□□□□ 0.16
CAPRIN1-213ENST00000533562 NCBP3Q53F19 620 aaKnown RBP16.04■□□□□ 0.16
CAPRIN1-213ENST00000533562 DPP8Q6V1X1 898 aaPredicted RBP16.04■□□□□ 0.16
CAPRIN1-213ENST00000533562 TMC4Q7Z404 712 aa16.04■□□□□ 0.16
CAPRIN1-213ENST00000533562 MPNDQ8N594 471 aa16.04■□□□□ 0.16
CAPRIN1-213ENST00000533562 GRAPLQ8TC17 118 aaPredicted RBP16.04■□□□□ 0.16
CAPRIN1-213ENST00000533562 FAM89AQ96GI7 184 aa16.04■□□□□ 0.16
CAPRIN1-213ENST00000533562 RTFDC1Q9BY42 306 aaPredicted RBP16.04■□□□□ 0.16
CAPRIN1-213ENST00000533562 HSP90B1P14625 803 aaKnown RBP16.03■□□□□ 0.16
CAPRIN1-213ENST00000533562 LMOD1P29536 600 aaPredicted RBP16.03■□□□□ 0.16
CAPRIN1-213ENST00000533562 CCDC30Q5VVM6 783 aa16.03■□□□□ 0.16
CAPRIN1-213ENST00000533562 C8orf58Q8NAV2 365 aa16.03■□□□□ 0.16
CAPRIN1-213ENST00000533562 ZNF428Q96B54 188 aa16.03■□□□□ 0.16
CAPRIN1-213ENST00000533562 CREBZFQ9NS37 354 aa16.03■□□□□ 0.16
CAPRIN1-213ENST00000533562 ANKRD36CQ5JPF3 1778 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms