RNA–Protein interactions for RNA: ENST00000533411.5

SOX6-215, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-215ENST00000533411 GOLGB1Q14789 3259 aaKnown RBP8.86□□□□□ -0.99
SOX6-215ENST00000533411 UTRNP46939 3433 aa8.85□□□□□ -0.99
SOX6-215ENST00000533411 DPEP1P16444 411 aa8.85□□□□□ -0.99
SOX6-215ENST00000533411 NFIXQ14938 502 aa8.85□□□□□ -0.99
SOX6-215ENST00000533411 TAF7Q15545 349 aaPredicted RBP8.85□□□□□ -0.99
SOX6-215ENST00000533411 BICDL1Q6ZP65 573 aa8.85□□□□□ -0.99
SOX6-215ENST00000533411 STK31Q9BXU1 1019 aa8.85□□□□□ -0.99
SOX6-215ENST00000533411 TEX13AQ9BXU3 409 aaPredicted RBP8.85□□□□□ -0.99
SOX6-215ENST00000533411 CHMP4AQ9BY43 222 aa8.85□□□□□ -0.99
SOX6-215ENST00000533411 TBC1D2BQ9UPU7 963 aa8.85□□□□□ -0.99
SOX6-215ENST00000533411 SSUH2Q9Y2M2 353 aa8.85□□□□□ -0.99
SOX6-215ENST00000533411 GRIN3BO60391 1043 aa8.84□□□□□ -0.99
SOX6-215ENST00000533411 TGFB2P61812 414 aa8.84□□□□□ -0.99
SOX6-215ENST00000533411 KRT24Q2M2I5 525 aa8.84□□□□□ -0.99
SOX6-215ENST00000533411 ANKRD31Q8N7Z5 1873 aa8.84□□□□□ -0.99
SOX6-215ENST00000533411 RWDD1Q9H446 243 aaPredicted RBP8.84□□□□□ -0.99
SOX6-215ENST00000533411 BCS1LQ9Y276 419 aa8.84□□□□□ -0.99
SOX6-215ENST00000533411 ARFGEF1Q9Y6D6 1849 aa8.84□□□□□ -0.99
SOX6-215ENST00000533411 CARMIL3Q8ND23 1372 aa8.84□□□□□ -0.99
SOX6-215ENST00000533411 A0A087WZG4 1122 aa8.83□□□□□ -1
SOX6-215ENST00000533411 SERPINB2P05120 415 aa8.83□□□□□ -1
SOX6-215ENST00000533411 HOXB7P09629 217 aa8.83□□□□□ -1
SOX6-215ENST00000533411 SNRPA1P09661 255 aaKnown RBP8.83□□□□□ -1
SOX6-215ENST00000533411 KCNA3P22001 575 aa8.83□□□□□ -1
SOX6-215ENST00000533411 CHRNA5P30532 468 aa8.83□□□□□ -1
SOX6-215ENST00000533411 IL6STP40189 918 aaPredicted RBP8.83□□□□□ -1
SOX6-215ENST00000533411 CCDC30Q5VVM6 783 aa8.83□□□□□ -1
SOX6-215ENST00000533411 TBC1D9BQ66K14 1250 aa8.83□□□□□ -1
SOX6-215ENST00000533411 DLEC1Q9Y238 1755 aa8.83□□□□□ -1
SOX6-215ENST00000533411 NBPF26B4DH59 902 aa8.82□□□□□ -1
SOX6-215ENST00000533411 CAMTA2O94983 1202 aa8.82□□□□□ -1
SOX6-215ENST00000533411 EIF4A1P60842 406 aaKnown RBP8.82□□□□□ -1
SOX6-215ENST00000533411 LHX8Q68G74 356 aa8.82□□□□□ -1
SOX6-215ENST00000533411 NBPF10Q6P3W6 841 aaKnown RBP8.82□□□□□ -1
SOX6-215ENST00000533411 DZIP3Q86Y13 1208 aaKnown RBP8.82□□□□□ -1
SOX6-215ENST00000533411 CCDC24Q8N4L8 307 aa8.82□□□□□ -1
SOX6-215ENST00000533411 NBPF15Q8N660 670 aa8.82□□□□□ -1
SOX6-215ENST00000533411 RBM19Q9Y4C8 960 aaKnown RBP8.82□□□□□ -1
SOX6-215ENST00000533411 COL11A2P13942 1736 aaPredicted RBP8.82□□□□□ -1
SOX6-215ENST00000533411 HDAC1Q13547 482 aaPredicted RBP8.81□□□□□ -1
SOX6-215ENST00000533411 HDGFL1Q5TGJ6 251 aa8.81□□□□□ -1
SOX6-215ENST00000533411 ZBTB40Q9NUA8 1239 aa8.81□□□□□ -1
SOX6-215ENST00000533411 PCDHB15Q9Y5E8 787 aa8.81□□□□□ -1
SOX6-215ENST00000533411 CACNA1SQ13698 1873 aa8.81□□□□□ -1
SOX6-215ENST00000533411 ATP10DQ9P241 1426 aa8.8□□□□□ -1
SOX6-215ENST00000533411 GIGYF1O75420 1035 aaPredicted RBP8.8□□□□□ -1
SOX6-215ENST00000533411 IGHDP01880 384 aa8.8□□□□□ -1
SOX6-215ENST00000533411 INTS3Q68E01 1043 aaKnown RBP8.8□□□□□ -1
SOX6-215ENST00000533411 NPM2Q86SE8 214 aaKnown RBP8.8□□□□□ -1
SOX6-215ENST00000533411 PIM2Q9P1W9 311 aa8.8□□□□□ -1
SOX6-215ENST00000533411 ADCY9O60503 1353 aa8.8□□□□□ -1
SOX6-215ENST00000533411 NUP98P52948 1817 aa8.8□□□□□ -1
SOX6-215ENST00000533411 RGS3P49796 1198 aa8.79□□□□□ -1
SOX6-215ENST00000533411 CCT4P50991 539 aaKnown RBP8.79□□□□□ -1
SOX6-215ENST00000533411 FLIIQ13045 1269 aa8.79□□□□□ -1
SOX6-215ENST00000533411 DALRD3Q5D0E6 543 aaKnown RBP8.79□□□□□ -1
SOX6-215ENST00000533411 PRR5LQ6MZQ0 368 aa8.79□□□□□ -1
SOX6-215ENST00000533411 ARHGAP27Q6ZUM4 889 aa8.79□□□□□ -1
SOX6-215ENST00000533411 ZNF526Q8TF50 670 aaPredicted RBP8.79□□□□□ -1
SOX6-215ENST00000533411 MYL6BP14649 208 aa8.78□□□□□ -1
SOX6-215ENST00000533411 FKBP5Q13451 457 aaPredicted RBP8.78□□□□□ -1
SOX6-215ENST00000533411 HLFQ16534 295 aa8.78□□□□□ -1
SOX6-215ENST00000533411 TTLL7Q6ZT98 887 aa8.78□□□□□ -1
SOX6-215ENST00000533411 C2CD5Q86YS7 1000 aa8.78□□□□□ -1
SOX6-215ENST00000533411 SETDB2Q96T68 719 aa8.78□□□□□ -1
SOX6-215ENST00000533411 DAXXQ9UER7 740 aaPredicted RBP8.78□□□□□ -1
SOX6-215ENST00000533411 SBF1O95248 1867 aa8.78□□□□□ -1
SOX6-215ENST00000533411 CCDC88AQ3V6T2 1871 aa8.77□□□□□ -1.01
SOX6-215ENST00000533411 FAM177BA6PVY3 158 aa8.77□□□□□ -1.01
SOX6-215ENST00000533411 ZBTB7BO15156 539 aaPredicted RBP8.77□□□□□ -1.01
SOX6-215ENST00000533411 NPHP1O15259 732 aa8.77□□□□□ -1.01
SOX6-215ENST00000533411 ANXA1P04083 346 aa8.77□□□□□ -1.01
SOX6-215ENST00000533411 EIF2S2P20042 333 aaKnown RBP8.77□□□□□ -1.01
SOX6-215ENST00000533411 ANP32AP39687 249 aaKnown RBP8.77□□□□□ -1.01
SOX6-215ENST00000533411 PROSER3Q2NL68 480 aa8.77□□□□□ -1.01
SOX6-215ENST00000533411 CNBD1Q8NA66 436 aa8.77□□□□□ -1.01
SOX6-215ENST00000533411 NECTIN2Q92692 538 aa8.77□□□□□ -1.01
SOX6-215ENST00000533411 TNRC6CQ9HCJ0 1690 aaKnown RBP8.76□□□□□ -1.01
SOX6-215ENST00000533411 SLX4Q8IY92 1834 aa8.76□□□□□ -1.01
SOX6-215ENST00000533411 H0YIN7 160 aa8.76□□□□□ -1.01
SOX6-215ENST00000533411 CD44P16070 742 aaKnown RBP8.76□□□□□ -1.01
SOX6-215ENST00000533411 PDE4AP27815 886 aa8.76□□□□□ -1.01
SOX6-215ENST00000533411 RASSF7Q02833 373 aa8.76□□□□□ -1.01
SOX6-215ENST00000533411 FAM161AQ3B820 660 aa8.76□□□□□ -1.01
SOX6-215ENST00000533411 SLC4A10Q6U841 1118 aa8.76□□□□□ -1.01
SOX6-215ENST00000533411 CLEC4GQ6UXB4 293 aa8.76□□□□□ -1.01
SOX6-215ENST00000533411 SKAP1Q86WV1 359 aa8.76□□□□□ -1.01
SOX6-215ENST00000533411 NBPF5PQ86XG9 351 aaPredicted RBP8.76□□□□□ -1.01
SOX6-215ENST00000533411 SMC5Q8IY18 1101 aa8.76□□□□□ -1.01
SOX6-215ENST00000533411 ZNF622Q969S3 477 aaKnown RBP eCLIP8.76□□□□□ -1.018e-13■■■■■ 49.7
SOX6-215ENST00000533411 ZBTB3Q9H5J0 574 aa8.76□□□□□ -1.01
SOX6-215ENST00000533411 PDZRN3Q9UPQ7 1066 aa8.76□□□□□ -1.01
SOX6-215ENST00000533411 NIP7Q9Y221 180 aaKnown RBP eCLIP8.76□□□□□ -1.01
SOX6-215ENST00000533411 ZNF652Q9Y2D9 606 aa8.76□□□□□ -1.01
SOX6-215ENST00000533411 ARFGEF2Q9Y6D5 1785 aa8.76□□□□□ -1.01
SOX6-215ENST00000533411 ST5P78524 1137 aa8.75□□□□□ -1.01
SOX6-215ENST00000533411 PDIA6Q15084 440 aa8.75□□□□□ -1.01
SOX6-215ENST00000533411 C9orf131Q5VYM1 1079 aa8.75□□□□□ -1.01
SOX6-215ENST00000533411 G2E3Q7L622 706 aa8.75□□□□□ -1.01
SOX6-215ENST00000533411 LRP10Q7Z4F1 713 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms