RNA–Protein interactions for RNA: ENST00000533235.5

SLC43A3-223, Transcript of solute carrier family 43 member 3, human

TSL 5

Gene SLC43A3, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC43A3-223	ENST00000533235	HDGFL1	Q5TGJ6	251 aa		18.82	■□□□□ 0.6
SLC43A3-223	ENST00000533235	TAF1	P21675	1872 aa		18.82	■□□□□ 0.6
SLC43A3-223	ENST00000533235	C3orf67	Q6ZVT6	689 aa		18.81	■□□□□ 0.6
SLC43A3-223	ENST00000533235	RBM46	Q8TBY0	533 aa	Known RBP	18.81	■□□□□ 0.6
SLC43A3-223	ENST00000533235	ZNF316	A6NFI3	1004 aa	Predicted RBP	18.8	■□□□□ 0.6
SLC43A3-223	ENST00000533235	DUSP27	Q5VZP5	1158 aa		18.8	■□□□□ 0.6
SLC43A3-223	ENST00000533235	PPP1R42	Q7Z4L9	355 aa		18.8	■□□□□ 0.6
SLC43A3-223	ENST00000533235	SLC51A	Q86UW1	340 aa		18.8	■□□□□ 0.6
SLC43A3-223	ENST00000533235	IFT57	Q9NWB7	429 aa		18.8	■□□□□ 0.6
SLC43A3-223	ENST00000533235	COL4A5	P29400	1685 aa		18.79	■□□□□ 0.6
SLC43A3-223	ENST00000533235	SCN4A	P35499	1836 aa		18.79	■□□□□ 0.6
SLC43A3-223	ENST00000533235	ALDH1B1	P30837	517 aa		18.79	■□□□□ 0.6
SLC43A3-223	ENST00000533235	FKBP4	Q02790	459 aa	Known RBP eCLIP	18.79	■□□□□ 0.6
SLC43A3-223	ENST00000533235	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.79	■□□□□ 0.6
SLC43A3-223	ENST00000533235	LRRC37A	A6NMS7	1700 aa		18.78	■□□□□ 0.6
SLC43A3-223	ENST00000533235	HOXA10	P31260	410 aa	Predicted RBP	18.78	■□□□□ 0.6
SLC43A3-223	ENST00000533235	NLRP10	Q86W26	655 aa		18.78	■□□□□ 0.6
SLC43A3-223	ENST00000533235	RPGR	Q92834	1020 aa	Known RBP	18.78	■□□□□ 0.6
SLC43A3-223	ENST00000533235	UTP14A	Q9BVJ6	771 aa	Known RBP	18.78	■□□□□ 0.6
SLC43A3-223	ENST00000533235	RNF123	Q5XPI4	1314 aa		18.77	■□□□□ 0.6
SLC43A3-223	ENST00000533235	POTEC	B2RU33	542 aa		18.77	■□□□□ 0.6
SLC43A3-223	ENST00000533235	GNAI1	P63096	354 aa		18.77	■□□□□ 0.6
SLC43A3-223	ENST00000533235	HSP90AB3P	Q58FF7	597 aa		18.77	■□□□□ 0.6
SLC43A3-223	ENST00000533235	DBF4	Q9UBU7	674 aa	Predicted RBP	18.77	■□□□□ 0.6
SLC43A3-223	ENST00000533235	CALD1	Q05682	793 aa	Known RBP	18.76	■□□□□ 0.59
SLC43A3-223	ENST00000533235	TCIRG1	Q13488	830 aa		18.76	■□□□□ 0.59
SLC43A3-223	ENST00000533235	ZNF277	Q9NRM2	450 aa	Predicted RBP	18.76	■□□□□ 0.59
SLC43A3-223	ENST00000533235	VEGFA	P15692	232 aa	Predicted RBP	18.75	■□□□□ 0.59
SLC43A3-223	ENST00000533235	FSTL1	Q12841	308 aa		18.75	■□□□□ 0.59
SLC43A3-223	ENST00000533235	SLC10A5	Q5PT55	438 aa		18.75	■□□□□ 0.59
SLC43A3-223	ENST00000533235	RTKN2	Q8IZC4	609 aa		18.75	■□□□□ 0.59
SLC43A3-223	ENST00000533235	PLBD2	Q8NHP8	589 aa		18.75	■□□□□ 0.59
SLC43A3-223	ENST00000533235	CRAMP1	Q96RY5	1269 aa		18.75	■□□□□ 0.59
SLC43A3-223	ENST00000533235	COL4A1	P02462	1669 aa		18.75	■□□□□ 0.59
SLC43A3-223	ENST00000533235	PPEF1	O14829	653 aa	Predicted RBP	18.74	■□□□□ 0.59
SLC43A3-223	ENST00000533235	APLP1	P51693	650 aa		18.74	■□□□□ 0.59
SLC43A3-223	ENST00000533235	DPY19L2	Q6NUT2	758 aa		18.74	■□□□□ 0.59
SLC43A3-223	ENST00000533235	SYNE4	Q8N205	404 aa		18.74	■□□□□ 0.59
SLC43A3-223	ENST00000533235	RBM17	Q96I25	401 aa	Known RBP	18.74	■□□□□ 0.59
SLC43A3-223	ENST00000533235	MRS2	Q9HD23	443 aa		18.74	■□□□□ 0.59
SLC43A3-223	ENST00000533235	ABCC4	O15439	1325 aa		18.74	■□□□□ 0.59
SLC43A3-223	ENST00000533235	ZNF541	Q9H0D2	1346 aa		18.74	■□□□□ 0.59
SLC43A3-223	ENST00000533235	ADAMTSL1	Q8N6G6	1762 aa		18.73	■□□□□ 0.59
SLC43A3-223	ENST00000533235	ELL2	O00472	640 aa	Predicted RBP	18.73	■□□□□ 0.59
SLC43A3-223	ENST00000533235	DDN	O94850	711 aa	Predicted RBP	18.73	■□□□□ 0.59
SLC43A3-223	ENST00000533235	C8orf58	Q8NAV2	365 aa		18.73	■□□□□ 0.59
SLC43A3-223	ENST00000533235	ZNF428	Q96B54	188 aa		18.73	■□□□□ 0.59
SLC43A3-223	ENST00000533235	NLRP3	Q96P20	1036 aa		18.73	■□□□□ 0.59
SLC43A3-223	ENST00000533235	PSMD1	Q99460	953 aa		18.73	■□□□□ 0.59
SLC43A3-223	ENST00000533235	HYPK	Q9NX55	129 aa		18.73	■□□□□ 0.59
SLC43A3-223	ENST00000533235	SH3TC1	Q8TE82	1336 aa		18.73	■□□□□ 0.59
SLC43A3-223	ENST00000533235	ANP32C	O43423	234 aa		18.72	■□□□□ 0.59
SLC43A3-223	ENST00000533235	HCLS1	P14317	486 aa	Predicted RBP	18.72	■□□□□ 0.59
SLC43A3-223	ENST00000533235	IARS	P41252	1262 aa	Known RBP	18.72	■□□□□ 0.59
SLC43A3-223	ENST00000533235	ANKRD13D	Q6ZTN6	518 aa		18.72	■□□□□ 0.59
SLC43A3-223	ENST00000533235	SMC1B	Q8NDV3	1235 aa		18.72	■□□□□ 0.59
SLC43A3-223	ENST00000533235	ISCA1	Q9BUE6	129 aa		18.72	■□□□□ 0.59
SLC43A3-223	ENST00000533235	DUOX1	Q9NRD9	1551 aa		18.72	■□□□□ 0.59
SLC43A3-223	ENST00000533235	LTBP1	Q14766	1721 aa		18.71	■□□□□ 0.59
SLC43A3-223	ENST00000533235	CCDC27	Q2M243	656 aa		18.71	■□□□□ 0.59
SLC43A3-223	ENST00000533235	CC2D2B	Q6DHV5	1058 aa		18.71	■□□□□ 0.59
SLC43A3-223	ENST00000533235	TSR2	Q969E8	191 aa	Known RBP	18.71	■□□□□ 0.59
SLC43A3-223	ENST00000533235	PHAX	Q9H814	394 aa	Known RBP	18.71	■□□□□ 0.59
SLC43A3-223	ENST00000533235	TRMT112	Q9UI30	125 aa	Known RBP	18.71	■□□□□ 0.59
SLC43A3-223	ENST00000533235	ATP5J2-PTCD1	G3V325	749 aa		18.7	■□□□□ 0.58
SLC43A3-223	ENST00000533235	TCERG1	O14776	1098 aa	Known RBP	18.7	■□□□□ 0.58
SLC43A3-223	ENST00000533235	TSPYL6	Q8N831	410 aa		18.7	■□□□□ 0.58
SLC43A3-223	ENST00000533235	HTRA3	P83110	453 aa		18.69	■□□□□ 0.58
SLC43A3-223	ENST00000533235	WWC1	Q8IX03	1113 aa		18.69	■□□□□ 0.58
SLC43A3-223	ENST00000533235	L3MBTL3	Q96JM7	780 aa	Predicted RBP	18.69	■□□□□ 0.58
SLC43A3-223	ENST00000533235	CACNA1F	O60840	1977 aa		18.69	■□□□□ 0.58
SLC43A3-223	ENST00000533235	MYH3	P11055	1940 aa		18.68	■□□□□ 0.58
SLC43A3-223	ENST00000533235	FZD9	O00144	591 aa		18.68	■□□□□ 0.58
SLC43A3-223	ENST00000533235	POTEI	P0CG38	1075 aa		18.67	■□□□□ 0.58
SLC43A3-223	ENST00000533235	POTEJ	P0CG39	1038 aa		18.67	■□□□□ 0.58
SLC43A3-223	ENST00000533235	GOLGA2	Q08379	1002 aa		18.67	■□□□□ 0.58
SLC43A3-223	ENST00000533235	ATP6V0A2	Q9Y487	856 aa		18.67	■□□□□ 0.58
SLC43A3-223	ENST00000533235	SPEF2	Q9C093	1822 aa		18.66	■□□□□ 0.58
SLC43A3-223	ENST00000533235	GRIPAP1	Q4V328	841 aa		18.66	■□□□□ 0.58
SLC43A3-223	ENST00000533235	DNAJC5G	Q8N7S2	189 aa		18.66	■□□□□ 0.58
SLC43A3-223	ENST00000533235	FAM89A	Q96GI7	184 aa		18.66	■□□□□ 0.58
SLC43A3-223	ENST00000533235	TRIM28	Q13263	835 aa	Known RBP	18.65	■□□□□ 0.58
SLC43A3-223	ENST00000533235	GRAP	Q13588	217 aa		18.65	■□□□□ 0.58
SLC43A3-223	ENST00000533235	RIC3	Q7Z5B4	369 aa		18.65	■□□□□ 0.58
SLC43A3-223	ENST00000533235	GRAPL	Q8TC17	118 aa	Predicted RBP	18.65	■□□□□ 0.58
SLC43A3-223	ENST00000533235	IL16	Q14005	1332 aa		18.65	■□□□□ 0.58
SLC43A3-223	ENST00000533235	IQCA1L	A6NCM1	817 aa		18.64	■□□□□ 0.57
SLC43A3-223	ENST00000533235	NCBP3	Q53F19	620 aa	Known RBP	18.64	■□□□□ 0.57
SLC43A3-223	ENST00000533235	RTL5	Q5HYW3	569 aa	Predicted RBP	18.64	■□□□□ 0.57
SLC43A3-223	ENST00000533235	CCDC30	Q5VVM6	783 aa		18.64	■□□□□ 0.57
SLC43A3-223	ENST00000533235	DDX46	Q7L014	1031 aa	Known RBP	18.63	■□□□□ 0.57
SLC43A3-223	ENST00000533235	LARGE2	Q8N3Y3	721 aa		18.63	■□□□□ 0.57
SLC43A3-223	ENST00000533235	JDP2	Q8WYK2	163 aa		18.63	■□□□□ 0.57
SLC43A3-223	ENST00000533235	MYD88	Q99836	296 aa		18.63	■□□□□ 0.57
SLC43A3-223	ENST00000533235	TAF1D	Q9H5J8	278 aa	Predicted RBP	18.63	■□□□□ 0.57
SLC43A3-223	ENST00000533235	FANCI	Q9NVI1	1328 aa		18.63	■□□□□ 0.57
SLC43A3-223	ENST00000533235	BBOX1	O75936	387 aa		18.62	■□□□□ 0.57
SLC43A3-223	ENST00000533235	SF3B3	Q15393	1217 aa	Known RBP	18.62	■□□□□ 0.57
SLC43A3-223	ENST00000533235	AOC3	Q16853	763 aa		18.62	■□□□□ 0.57
SLC43A3-223	ENST00000533235	CHADL	Q6NUI6	762 aa		18.62	■□□□□ 0.57

Retrieved 100 of 20,778 RNA–protein pairs in 179.9 ms