RNA–Protein interactions for RNA: ENST00000533105.1

NDUFS3-210, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4

Gene NDUFS3, Length 567 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-210ENST00000533105 CRY2Q49AN0 593 aa28.37■■■□□ 2.13
NDUFS3-210ENST00000533105 ANKRD13DQ6ZTN6 518 aa28.37■■■□□ 2.13
NDUFS3-210ENST00000533105 NLRP10Q86W26 655 aa28.37■■■□□ 2.13
NDUFS3-210ENST00000533105 PLBD2Q8NHP8 589 aa28.37■■■□□ 2.13
NDUFS3-210ENST00000533105 C7orf43Q8WVR3 580 aa28.36■■■□□ 2.13
NDUFS3-210ENST00000533105 KDM2BQ8NHM5 1336 aa28.36■■■□□ 2.13
NDUFS3-210ENST00000533105 CCDC93Q567U6 631 aa28.35■■■□□ 2.13
NDUFS3-210ENST00000533105 ZNF428Q96B54 188 aa28.35■■■□□ 2.13
NDUFS3-210ENST00000533105 OLFM4Q6UX06 510 aa28.34■■■□□ 2.13
NDUFS3-210ENST00000533105 TSPYL6Q8N831 410 aa28.34■■■□□ 2.13
NDUFS3-210ENST00000533105 NLRP3Q96P20 1036 aa28.34■■■□□ 2.13
NDUFS3-210ENST00000533105 TRMT112Q9UI30 125 aaKnown RBP28.34■■■□□ 2.13
NDUFS3-210ENST00000533105 ZC3H4Q9UPT8 1303 aaKnown RBP28.34■■■□□ 2.13
NDUFS3-210ENST00000533105 ARFGEF2Q9Y6D5 1785 aa28.34■■■□□ 2.13
NDUFS3-210ENST00000533105 RIC1Q4ADV7 1423 aa28.34■■■□□ 2.13
NDUFS3-210ENST00000533105 C3orf67Q6ZVT6 689 aa28.33■■■□□ 2.13
NDUFS3-210ENST00000533105 PHAXQ9H814 394 aaKnown RBP28.33■■■□□ 2.13
NDUFS3-210ENST00000533105 LTBP3Q9NS15 1303 aa28.33■■■□□ 2.13
NDUFS3-210ENST00000533105 NCBP3Q53F19 620 aaKnown RBP28.32■■■□□ 2.12
NDUFS3-210ENST00000533105 RBM17Q96I25 401 aaKnown RBP28.32■■■□□ 2.12
NDUFS3-210ENST00000533105 FER1L6Q2WGJ9 1857 aa28.32■■■□□ 2.12
NDUFS3-210ENST00000533105 GOLGA2Q08379 1002 aa28.31■■■□□ 2.12
NDUFS3-210ENST00000533105 SLC10A5Q5PT55 438 aa28.31■■■□□ 2.12
NDUFS3-210ENST00000533105 CCDC30Q5VVM6 783 aa28.31■■■□□ 2.12
NDUFS3-210ENST00000533105 RIC3Q7Z5B4 369 aa28.31■■■□□ 2.12
NDUFS3-210ENST00000533105 ANKRD36CQ5JPF3 1778 aa28.3■■■□□ 2.12
NDUFS3-210ENST00000533105 IL16Q14005 1332 aa28.3■■■□□ 2.12
NDUFS3-210ENST00000533105 RNF123Q5XPI4 1314 aa28.3■■■□□ 2.12
NDUFS3-210ENST00000533105 ATP5J2-PTCD1G3V325 749 aa28.3■■■□□ 2.12
NDUFS3-210ENST00000533105 HCLS1P14317 486 aaPredicted RBP28.3■■■□□ 2.12
NDUFS3-210ENST00000533105 HOXA10P31260 410 aaPredicted RBP28.3■■■□□ 2.12
NDUFS3-210ENST00000533105 SYNE4Q8N205 404 aa28.3■■■□□ 2.12
NDUFS3-210ENST00000533105 CHMP4AQ9BY43 222 aa28.3■■■□□ 2.12
NDUFS3-210ENST00000533105 RRAGCQ9HB90 399 aa28.3■■■□□ 2.12
NDUFS3-210ENST00000533105 RTKN2Q8IZC4 609 aa28.29■■■□□ 2.12
NDUFS3-210ENST00000533105 CCDC88AQ3V6T2 1871 aa28.28■■■□□ 2.12
NDUFS3-210ENST00000533105 SH3TC1Q8TE82 1336 aa28.28■■■□□ 2.12
NDUFS3-210ENST00000533105 GLTPD2A6NH11 291 aa28.28■■■□□ 2.12
NDUFS3-210ENST00000533105 TCERG1O14776 1098 aaKnown RBP28.27■■■□□ 2.12
NDUFS3-210ENST00000533105 FKBP4Q02790 459 aaKnown RBP eCLIP28.27■■■□□ 2.12
NDUFS3-210ENST00000533105 C16orf71Q8IYS4 520 aaPredicted RBP28.27■■■□□ 2.12
NDUFS3-210ENST00000533105 CRAMP1Q96RY5 1269 aa28.27■■■□□ 2.12
NDUFS3-210ENST00000533105 ISCA1Q9BUE6 129 aa28.27■■■□□ 2.12
NDUFS3-210ENST00000533105 TIAM2Q8IVF5 1701 aa28.26■■■□□ 2.12
NDUFS3-210ENST00000533105 TOMM70O94826 608 aa28.26■■■□□ 2.11
NDUFS3-210ENST00000533105 TWISTNBQ3B726 338 aaPredicted RBP28.26■■■□□ 2.11
NDUFS3-210ENST00000533105 WDR63Q8IWG1 891 aa28.26■■■□□ 2.11
NDUFS3-210ENST00000533105 ZNF277Q9NRM2 450 aaPredicted RBP28.26■■■□□ 2.11
NDUFS3-210ENST00000533105 PPEF1O14829 653 aaPredicted RBP28.25■■■□□ 2.11
NDUFS3-210ENST00000533105 DPY19L2Q6NUT2 758 aa28.25■■■□□ 2.11
NDUFS3-210ENST00000533105 FAM89AQ96GI7 184 aa28.24■■■□□ 2.11
NDUFS3-210ENST00000533105 STK31Q9BXU1 1019 aa28.24■■■□□ 2.11
NDUFS3-210ENST00000533105 FANCIQ9NVI1 1328 aa28.23■■■□□ 2.11
NDUFS3-210ENST00000533105 RTL5Q5HYW3 569 aaPredicted RBP28.23■■■□□ 2.11
NDUFS3-210ENST00000533105 MYD88Q99836 296 aa28.23■■■□□ 2.11
NDUFS3-210ENST00000533105 DDX58O95786 925 aaKnown RBP28.22■■■□□ 2.11
NDUFS3-210ENST00000533105 CC2D2BQ6DHV5 1058 aa28.22■■■□□ 2.11
NDUFS3-210ENST00000533105 SLC51AQ86UW1 340 aa28.21■■■□□ 2.11
NDUFS3-210ENST00000533105 ABCC4O15439 1325 aa28.2■■■□□ 2.11
NDUFS3-210ENST00000533105 TRIM28Q13263 835 aaKnown RBP28.2■■■□□ 2.1
NDUFS3-210ENST00000533105 TMX4Q9H1E5 349 aaPredicted RBP28.2■■■□□ 2.1
NDUFS3-210ENST00000533105 IARSP41252 1262 aaKnown RBP28.19■■■□□ 2.1
NDUFS3-210ENST00000533105 DDX46Q7L014 1031 aaKnown RBP28.19■■■□□ 2.1
NDUFS3-210ENST00000533105 DICER1Q9UPY3 1922 aaKnown RBP28.18■■■□□ 2.1
NDUFS3-210ENST00000533105 VEGFAP15692 232 aaPredicted RBP28.18■■■□□ 2.1
NDUFS3-210ENST00000533105 HSPA6P17066 643 aa28.18■■■□□ 2.1
NDUFS3-210ENST00000533105 PSMD1Q99460 953 aa28.18■■■□□ 2.1
NDUFS3-210ENST00000533105 MAP3K2Q9Y2U5 619 aa28.18■■■□□ 2.1
NDUFS3-210ENST00000533105 SLC4A2P04920 1241 aa28.17■■■□□ 2.1
NDUFS3-210ENST00000533105 RBM46Q8TBY0 533 aaKnown RBP28.17■■■□□ 2.1
NDUFS3-210ENST00000533105 METTL22Q9BUU2 404 aaPredicted RBP28.17■■■□□ 2.1
NDUFS3-210ENST00000533105 SPINK5Q9NQ38 1064 aaPredicted RBP28.17■■■□□ 2.1
NDUFS3-210ENST00000533105 BBOX1O75936 387 aa28.16■■■□□ 2.1
NDUFS3-210ENST00000533105 DDNO94850 711 aaPredicted RBP28.16■■■□□ 2.1
NDUFS3-210ENST00000533105 EXOSC9Q06265 439 aaKnown RBP28.16■■■□□ 2.1
NDUFS3-210ENST00000533105 GRIPAP1Q4V328 841 aa28.16■■■□□ 2.1
NDUFS3-210ENST00000533105 ATP6V0A2Q9Y487 856 aa28.16■■■□□ 2.1
NDUFS3-210ENST00000533105 SNED1Q8TER0 1413 aa28.16■■■□□ 2.1
NDUFS3-210ENST00000533105 PI4KAP2A4QPH2 592 aa28.15■■■□□ 2.1
NDUFS3-210ENST00000533105 IRS4O14654 1257 aaPredicted RBP28.15■■■□□ 2.1
NDUFS3-210ENST00000533105 KSR2Q6VAB6 950 aa28.15■■■□□ 2.1
NDUFS3-210ENST00000533105 PI4KAP1Q8N8J0 262 aa28.15■■■□□ 2.1
NDUFS3-210ENST00000533105 LAMB2P55268 1798 aa28.14■■■□□ 2.1
NDUFS3-210ENST00000533105 GRAPQ13588 217 aa28.14■■■□□ 2.1
NDUFS3-210ENST00000533105 G2E3Q7L622 706 aa28.14■■■□□ 2.1
NDUFS3-210ENST00000533105 ZBTB38Q8NAP3 1195 aaPredicted RBP28.14■■■□□ 2.1
NDUFS3-210ENST00000533105 CCDC191Q8NCU4 936 aa28.14■■■□□ 2.1
NDUFS3-210ENST00000533105 GRAPLQ8TC17 118 aaPredicted RBP28.14■■■□□ 2.1
NDUFS3-210ENST00000533105 MYH16Q9H6N6 1097 aa28.14■■■□□ 2.1
NDUFS3-210ENST00000533105 CWC25Q9NXE8 425 aaPredicted RBP28.14■■■□□ 2.1
NDUFS3-210ENST00000533105 VAMP4O75379 141 aa28.13■■■□□ 2.09
NDUFS3-210ENST00000533105 POTECB2RU33 542 aa28.12■■■□□ 2.09
NDUFS3-210ENST00000533105 JDP2Q8WYK2 163 aa28.12■■■□□ 2.09
NDUFS3-210ENST00000533105 JARID2Q92833 1246 aaPredicted RBP28.12■■■□□ 2.09
NDUFS3-210ENST00000533105 SF3B3Q15393 1217 aaKnown RBP28.11■■■□□ 2.09
NDUFS3-210ENST00000533105 SP8Q8IXZ3 490 aa28.11■■■□□ 2.09
NDUFS3-210ENST00000533105 ZNF541Q9H0D2 1346 aa28.11■■■□□ 2.09
NDUFS3-210ENST00000533105 DDX60Q8IY21 1712 aaKnown RBP28.1■■■□□ 2.09
NDUFS3-210ENST00000533105 NEXNQ0ZGT2 675 aa28.1■■■□□ 2.09
NDUFS3-210ENST00000533105 LARGE2Q8N3Y3 721 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms