RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 SLC4A10Q6U841 1118 aa15□□□□□ -0.01
PPFIA1-220ENST00000532024 GOLGA6L2Q8N9W4 650 aaPredicted RBP15□□□□□ -0.01
PPFIA1-220ENST00000532024 NOB1Q9ULX3 412 aaKnown RBP15□□□□□ -0.01
PPFIA1-220ENST00000532024 PDZRN3Q9UPQ7 1066 aa15□□□□□ -0.01
PPFIA1-220ENST00000532024 SH3TC1Q8TE82 1336 aa14.99□□□□□ -0.01
PPFIA1-220ENST00000532024 F6X3S4 739 aa14.99□□□□□ -0.01
PPFIA1-220ENST00000532024 BCAR3O75815 825 aa14.99□□□□□ -0.01
PPFIA1-220ENST00000532024 PDE6BP35913 854 aa14.99□□□□□ -0.01
PPFIA1-220ENST00000532024 SUSD4Q5VX71 490 aa14.99□□□□□ -0.01
PPFIA1-220ENST00000532024 ZKSCAN2Q63HK3 967 aa14.99□□□□□ -0.01
PPFIA1-220ENST00000532024 SRCIN1Q9C0H9 1055 aa14.99□□□□□ -0.01
PPFIA1-220ENST00000532024 ALDH1L1O75891 902 aa14.98□□□□□ -0.01
PPFIA1-220ENST00000532024 NTSR2O95665 410 aa14.98□□□□□ -0.01
PPFIA1-220ENST00000532024 MS4A1P11836 297 aa14.98□□□□□ -0.01
PPFIA1-220ENST00000532024 CCT4P50991 539 aaKnown RBP14.98□□□□□ -0.01
PPFIA1-220ENST00000532024 ATF7IPQ6VMQ6 1270 aa14.98□□□□□ -0.01
PPFIA1-220ENST00000532024 BRIP1Q9BX63 1249 aa14.98□□□□□ -0.01
PPFIA1-220ENST00000532024 FHDC1Q9C0D6 1143 aaPredicted RBP14.98□□□□□ -0.01
PPFIA1-220ENST00000532024 RIC1Q4ADV7 1423 aa14.98□□□□□ -0.01
PPFIA1-220ENST00000532024 KIF13BQ9NQT8 1826 aa14.97□□□□□ -0.01
PPFIA1-220ENST00000532024 NEURL1BA8MQ27 555 aa14.97□□□□□ -0.01
PPFIA1-220ENST00000532024 TGFB2P61812 414 aa14.97□□□□□ -0.01
PPFIA1-220ENST00000532024 CWF19L2Q2TBE0 894 aaKnown RBP14.97□□□□□ -0.01
PPFIA1-220ENST00000532024 FTSJ3Q8IY81 847 aaKnown RBP14.97□□□□□ -0.01
PPFIA1-220ENST00000532024 ZBTB38Q8NAP3 1195 aaPredicted RBP14.97□□□□□ -0.01
PPFIA1-220ENST00000532024 PCCAP05165 728 aaPredicted RBP14.96□□□□□ -0.01
PPFIA1-220ENST00000532024 IGKV5-2P06315 115 aa14.96□□□□□ -0.01
PPFIA1-220ENST00000532024 ERFEQ4G0M1 354 aa14.96□□□□□ -0.01
PPFIA1-220ENST00000532024 BEND3Q5T5X7 828 aa14.96□□□□□ -0.01
PPFIA1-220ENST00000532024 NUTM1Q86Y26 1132 aa14.96□□□□□ -0.01
PPFIA1-220ENST00000532024 N4BP2Q86UW6 1770 aaPredicted RBP14.96□□□□□ -0.02
PPFIA1-220ENST00000532024 H0YIN7 160 aa14.95□□□□□ -0.02
PPFIA1-220ENST00000532024 YY1P25490 414 aa14.95□□□□□ -0.02
PPFIA1-220ENST00000532024 GCKRQ14397 625 aa14.95□□□□□ -0.02
PPFIA1-220ENST00000532024 C9orf78Q9NZ63 289 aaPredicted RBP14.95□□□□□ -0.02
PPFIA1-220ENST00000532024 TRIM27P14373 513 aa14.94□□□□□ -0.02
PPFIA1-220ENST00000532024 FAM89AQ96GI7 184 aa14.94□□□□□ -0.02
PPFIA1-220ENST00000532024 NLRP3Q96P20 1036 aa14.94□□□□□ -0.02
PPFIA1-220ENST00000532024 SYT17Q9BSW7 474 aa14.94□□□□□ -0.02
PPFIA1-220ENST00000532024 ABCC12Q96J65 1359 aa14.94□□□□□ -0.02
PPFIA1-220ENST00000532024 ABCC4O15439 1325 aa14.93□□□□□ -0.02
PPFIA1-220ENST00000532024 CDHR2Q9BYE9 1310 aa14.93□□□□□ -0.02
PPFIA1-220ENST00000532024 LAMB2P55268 1798 aa14.93□□□□□ -0.02
PPFIA1-220ENST00000532024 GRM8O00222 908 aa14.93□□□□□ -0.02
PPFIA1-220ENST00000532024 IRS4O14654 1257 aaPredicted RBP14.93□□□□□ -0.02
PPFIA1-220ENST00000532024 SLC10A5Q5PT55 438 aa14.93□□□□□ -0.02
PPFIA1-220ENST00000532024 UBE3BQ7Z3V4 1068 aa14.93□□□□□ -0.02
PPFIA1-220ENST00000532024 C2CD5Q86YS7 1000 aa14.93□□□□□ -0.02
PPFIA1-220ENST00000532024 DZIP1LQ8IYY4 767 aaKnown RBP14.93□□□□□ -0.02
PPFIA1-220ENST00000532024 CCDC24Q8N4L8 307 aa14.93□□□□□ -0.02
PPFIA1-220ENST00000532024 HDAC5Q9UQL6 1122 aa14.93□□□□□ -0.02
PPFIA1-220ENST00000532024 DCAF8L1A6NGE4 600 aa14.92□□□□□ -0.02
PPFIA1-220ENST00000532024 RTL5Q5HYW3 569 aaPredicted RBP14.92□□□□□ -0.02
PPFIA1-220ENST00000532024 RPGRQ92834 1020 aaKnown RBP14.92□□□□□ -0.02
PPFIA1-220ENST00000532024 CLUAP1Q96AJ1 413 aa14.92□□□□□ -0.02
PPFIA1-220ENST00000532024 ANKRD31Q8N7Z5 1873 aa14.92□□□□□ -0.02
PPFIA1-220ENST00000532024 H7C1W4 665 aa14.91□□□□□ -0.02
PPFIA1-220ENST00000532024 HCLS1P14317 486 aaPredicted RBP14.91□□□□□ -0.02
PPFIA1-220ENST00000532024 NPR1P16066 1061 aa14.91□□□□□ -0.02
PPFIA1-220ENST00000532024 INTS3Q68E01 1043 aaKnown RBP14.91□□□□□ -0.02
PPFIA1-220ENST00000532024 DLEC1Q9Y238 1755 aa14.9□□□□□ -0.02
PPFIA1-220ENST00000532024 TNRC6CQ9HCJ0 1690 aaKnown RBP14.9□□□□□ -0.02
PPFIA1-220ENST00000532024 A0A0G2JLW4 131 aa14.9□□□□□ -0.02
PPFIA1-220ENST00000532024 KLRG2A4D1S0 409 aaPredicted RBP14.9□□□□□ -0.02
PPFIA1-220ENST00000532024 PDE8AO60658 829 aa14.9□□□□□ -0.02
PPFIA1-220ENST00000532024 DPEP1P16444 411 aa14.9□□□□□ -0.02
PPFIA1-220ENST00000532024 STYK1Q6J9G0 422 aa14.9□□□□□ -0.02
PPFIA1-220ENST00000532024 NLGN2Q8NFZ4 835 aa14.9□□□□□ -0.02
PPFIA1-220ENST00000532024 MASTLQ96GX5 879 aa14.9□□□□□ -0.02
PPFIA1-220ENST00000532024 PIM2Q9P1W9 311 aa14.9□□□□□ -0.02
PPFIA1-220ENST00000532024 DDX60Q8IY21 1712 aaKnown RBP14.89□□□□□ -0.03
PPFIA1-220ENST00000532024 KIAA1551Q9HCM1 1747 aa14.89□□□□□ -0.03
PPFIA1-220ENST00000532024 GNAI3P08754 354 aa14.89□□□□□ -0.03
PPFIA1-220ENST00000532024 SRGNP10124 158 aa14.89□□□□□ -0.03
PPFIA1-220ENST00000532024 CHRNA5P30532 468 aa14.89□□□□□ -0.03
PPFIA1-220ENST00000532024 ALDH1B1P30837 517 aa14.89□□□□□ -0.03
PPFIA1-220ENST00000532024 CRY2Q49AN0 593 aa14.89□□□□□ -0.03
PPFIA1-220ENST00000532024 CCDC152Q4G0S7 254 aa14.89□□□□□ -0.03
PPFIA1-220ENST00000532024 CNKSR1Q969H4 720 aa14.89□□□□□ -0.03
PPFIA1-220ENST00000532024 ZNF622Q969S3 477 aaKnown RBP eCLIP14.89□□□□□ -0.032e-11■■■□□ 14.8
PPFIA1-220ENST00000532024 RBM17Q96I25 401 aaKnown RBP14.89□□□□□ -0.03
PPFIA1-220ENST00000532024 CHMP4BQ9H444 224 aaKnown RBP14.89□□□□□ -0.03
PPFIA1-220ENST00000532024 COL11A2P13942 1736 aaPredicted RBP14.89□□□□□ -0.03
PPFIA1-220ENST00000532024 UBTFL1P0CB47 393 aaPredicted RBP14.88□□□□□ -0.03
PPFIA1-220ENST00000532024 PDE3AQ14432 1141 aa14.88□□□□□ -0.03
PPFIA1-220ENST00000532024 DDX46Q7L014 1031 aaKnown RBP14.88□□□□□ -0.03
PPFIA1-220ENST00000532024 ITPRIPQ8IWB1 547 aa14.88□□□□□ -0.03
PPFIA1-220ENST00000532024 SYNE4Q8N205 404 aa14.88□□□□□ -0.03
PPFIA1-220ENST00000532024 TTLL6Q8N841 843 aa14.88□□□□□ -0.03
PPFIA1-220ENST00000532024 UTYO14607 1347 aa14.88□□□□□ -0.03
PPFIA1-220ENST00000532024 CTSWP56202 376 aa14.87□□□□□ -0.03
PPFIA1-220ENST00000532024 DALRD3Q5D0E6 543 aaKnown RBP14.87□□□□□ -0.03
PPFIA1-220ENST00000532024 TMEM57Q8N5G2 664 aa14.87□□□□□ -0.03
PPFIA1-220ENST00000532024 JARID2Q92833 1246 aaPredicted RBP14.87□□□□□ -0.03
PPFIA1-220ENST00000532024 PLA2G12BQ9BX93 195 aa14.87□□□□□ -0.03
PPFIA1-220ENST00000532024 TMX4Q9H1E5 349 aaPredicted RBP14.87□□□□□ -0.03
PPFIA1-220ENST00000532024 MYH3P11055 1940 aa14.87□□□□□ -0.03
PPFIA1-220ENST00000532024 HOXA10P31260 410 aaPredicted RBP14.86□□□□□ -0.03
PPFIA1-220ENST00000532024 RRP1P56182 461 aaKnown RBP14.86□□□□□ -0.03
PPFIA1-220ENST00000532024 SF3B3Q15393 1217 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms