RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 PARP10Q53GL7 1025 aa22.25■■□□□ 1.15
CTSB-222ENST00000531551 SUSD4Q5VX71 490 aa22.25■■□□□ 1.15
CTSB-222ENST00000531551 TRMT112Q9UI30 125 aaKnown RBP22.24■■□□□ 1.15
CTSB-222ENST00000531551 NPHP1O15259 732 aa22.24■■□□□ 1.15
CTSB-222ENST00000531551 ZBTB7AO95365 584 aa22.24■■□□□ 1.15
CTSB-222ENST00000531551 EXOC6Q8TAG9 804 aa22.24■■□□□ 1.15
CTSB-222ENST00000531551 MEIS3Q99687 375 aa22.24■■□□□ 1.15
CTSB-222ENST00000531551 PPP1R42Q7Z4L9 355 aa22.23■■□□□ 1.15
CTSB-222ENST00000531551 SLC16A10Q8TF71 515 aa22.23■■□□□ 1.15
CTSB-222ENST00000531551 NUP98P52948 1817 aa22.23■■□□□ 1.15
CTSB-222ENST00000531551 GRM8O00222 908 aa22.22■■□□□ 1.15
CTSB-222ENST00000531551 GTF2E1P29083 439 aaPredicted RBP22.22■■□□□ 1.15
CTSB-222ENST00000531551 NBPF5PQ86XG9 351 aaPredicted RBP22.22■■□□□ 1.15
CTSB-222ENST00000531551 UTP14AQ9BVJ6 771 aaKnown RBP22.22■■□□□ 1.15
CTSB-222ENST00000531551 USP44Q9H0E7 712 aa22.22■■□□□ 1.15
CTSB-222ENST00000531551 ZBTB7BO15156 539 aaPredicted RBP22.22■■□□□ 1.15
CTSB-222ENST00000531551 NBPF7P0C2Y1 421 aaPredicted RBP22.22■■□□□ 1.15
CTSB-222ENST00000531551 TM4SF1P30408 202 aa22.22■■□□□ 1.15
CTSB-222ENST00000531551 UBE3BQ7Z3V4 1068 aa22.22■■□□□ 1.15
CTSB-222ENST00000531551 FAM89AQ96GI7 184 aa22.22■■□□□ 1.15
CTSB-222ENST00000531551 QSER1Q2KHR3 1735 aa22.21■■□□□ 1.15
CTSB-222ENST00000531551 MMP10P09238 476 aa22.21■■□□□ 1.15
CTSB-222ENST00000531551 CARMIL3Q8ND23 1372 aa22.21■■□□□ 1.15
CTSB-222ENST00000531551 NUTM1Q86Y26 1132 aa22.2■■□□□ 1.14
CTSB-222ENST00000531551 ATF5Q9Y2D1 282 aaPredicted RBP22.2■■□□□ 1.14
CTSB-222ENST00000531551 SERPINB2P05120 415 aa22.2■■□□□ 1.14
CTSB-222ENST00000531551 UBTFL1P0CB47 393 aaPredicted RBP22.2■■□□□ 1.14
CTSB-222ENST00000531551 DDR1Q08345 913 aa22.2■■□□□ 1.14
CTSB-222ENST00000531551 SYNE4Q8N205 404 aa22.2■■□□□ 1.14
CTSB-222ENST00000531551 ZBTB38Q8NAP3 1195 aaPredicted RBP22.2■■□□□ 1.14
CTSB-222ENST00000531551 PARP3Q9Y6F1 533 aa22.2■■□□□ 1.14
CTSB-222ENST00000531551 NTSR2O95665 410 aa22.19■■□□□ 1.14
CTSB-222ENST00000531551 GNAI3P08754 354 aa22.19■■□□□ 1.14
CTSB-222ENST00000531551 TPTE2Q6XPS3 522 aa22.19■■□□□ 1.14
CTSB-222ENST00000531551 CCDC24Q8N4L8 307 aa22.19■■□□□ 1.14
CTSB-222ENST00000531551 NYXQ9GZU5 481 aa22.19■■□□□ 1.14
CTSB-222ENST00000531551 CHMP4BQ9H444 224 aaKnown RBP22.19■■□□□ 1.14
CTSB-222ENST00000531551 C1orf115Q9H7X2 142 aa22.19■■□□□ 1.14
CTSB-222ENST00000531551 POLRMTO00411 1230 aaKnown RBP22.18■■□□□ 1.14
CTSB-222ENST00000531551 PCCAP05165 728 aaPredicted RBP22.18■■□□□ 1.14
CTSB-222ENST00000531551 SH3TC1Q8TE82 1336 aa22.18■■□□□ 1.14
CTSB-222ENST00000531551 H7C1W4 665 aa22.17■■□□□ 1.14
CTSB-222ENST00000531551 MTFR1LQ9H019 292 aa22.17■■□□□ 1.14
CTSB-222ENST00000531551 ANKRD36CQ5JPF3 1778 aa22.17■■□□□ 1.14
CTSB-222ENST00000531551 ERFEQ4G0M1 354 aa22.17■■□□□ 1.14
CTSB-222ENST00000531551 CNBD1Q8NA66 436 aa22.17■■□□□ 1.14
CTSB-222ENST00000531551 AFDNP55196 1824 aaKnown RBP22.17■■□□□ 1.14
CTSB-222ENST00000531551 IRS4O14654 1257 aaPredicted RBP22.15■■□□□ 1.14
CTSB-222ENST00000531551 SUCLG2Q96I99 432 aa22.15■■□□□ 1.14
CTSB-222ENST00000531551 ZBTB40Q9NUA8 1239 aa22.15■■□□□ 1.14
CTSB-222ENST00000531551 LRRFIP2Q9Y608 721 aaKnown RBP22.15■■□□□ 1.14
CTSB-222ENST00000531551 UTYO14607 1347 aa22.15■■□□□ 1.14
CTSB-222ENST00000531551 GNAI2P04899 355 aa22.15■■□□□ 1.14
CTSB-222ENST00000531551 HCLS1P14317 486 aaPredicted RBP22.15■■□□□ 1.14
CTSB-222ENST00000531551 CASP7P55210 303 aa22.14■■□□□ 1.13
CTSB-222ENST00000531551 PRR5LQ6MZQ0 368 aa22.14■■□□□ 1.13
CTSB-222ENST00000531551 POLD1P28340 1107 aa22.13■■□□□ 1.13
CTSB-222ENST00000531551 ST5P78524 1137 aa22.13■■□□□ 1.13
CTSB-222ENST00000531551 HDAC5Q9UQL6 1122 aa22.13■■□□□ 1.13
CTSB-222ENST00000531551 N4BP2Q86UW6 1770 aaPredicted RBP22.13■■□□□ 1.13
CTSB-222ENST00000531551 IBTKQ9P2D0 1353 aaPredicted RBP22.13■■□□□ 1.13
CTSB-222ENST00000531551 CASZ1Q86V15 1759 aa22.12■■□□□ 1.13
CTSB-222ENST00000531551 CDHR2Q9BYE9 1310 aa22.12■■□□□ 1.13
CTSB-222ENST00000531551 ABCC12Q96J65 1359 aa22.11■■□□□ 1.13
CTSB-222ENST00000531551 BICC1Q9H694 974 aaKnown RBP22.11■■□□□ 1.13
CTSB-222ENST00000531551 EPHA10Q5JZY3 1008 aa22.1■■□□□ 1.13
CTSB-222ENST00000531551 KAZALD1Q96I82 304 aa22.1■■□□□ 1.13
CTSB-222ENST00000531551 CCDC85AQ96PX6 553 aaPredicted RBP22.1■■□□□ 1.13
CTSB-222ENST00000531551 CHMP3Q9Y3E7 222 aa22.1■■□□□ 1.13
CTSB-222ENST00000531551 PDE8AO60658 829 aa22.09■■□□□ 1.13
CTSB-222ENST00000531551 HSP90B1P14625 803 aaKnown RBP22.09■■□□□ 1.13
CTSB-222ENST00000531551 COL24A1Q17RW2 1714 aa22.09■■□□□ 1.13
CTSB-222ENST00000531551 NLRP3Q96P20 1036 aa22.08■■□□□ 1.13
CTSB-222ENST00000531551 FOXO4P98177 505 aa22.07■■□□□ 1.12
CTSB-222ENST00000531551 SLC10A5Q5PT55 438 aa22.07■■□□□ 1.12
CTSB-222ENST00000531551 LMBR1LQ6UX01 489 aa22.07■■□□□ 1.12
CTSB-222ENST00000531551 AAMPQ13685 434 aa22.07■■□□□ 1.12
CTSB-222ENST00000531551 PLA2G12BQ9BX93 195 aa22.07■■□□□ 1.12
CTSB-222ENST00000531551 SPON1Q9HCB6 807 aa22.07■■□□□ 1.12
CTSB-222ENST00000531551 CTSWP56202 376 aa22.06■■□□□ 1.12
CTSB-222ENST00000531551 C3orf67Q6ZVT6 689 aa22.06■■□□□ 1.12
CTSB-222ENST00000531551 PCDHB15Q9Y5E8 787 aa22.06■■□□□ 1.12
CTSB-222ENST00000531551 CEP85Q6P2H3 762 aa22.05■■□□□ 1.12
CTSB-222ENST00000531551 ANKRD44Q8N8A2 993 aa22.05■■□□□ 1.12
CTSB-222ENST00000531551 KLHL34Q8N239 644 aa22.05■■□□□ 1.12
CTSB-222ENST00000531551 PPP1R1BQ9UD71 204 aaPredicted RBP22.05■■□□□ 1.12
CTSB-222ENST00000531551 PTGER2P43116 358 aa22.04■■□□□ 1.12
CTSB-222ENST00000531551 TTLL11Q8NHH1 800 aa22.04■■□□□ 1.12
CTSB-222ENST00000531551 BRIP1Q9BX63 1249 aa22.04■■□□□ 1.12
CTSB-222ENST00000531551 SRGAP3O43295 1099 aa22.03■■□□□ 1.12
CTSB-222ENST00000531551 RABL6Q3YEC7 729 aaPredicted RBP22.03■■□□□ 1.12
CTSB-222ENST00000531551 CCDC152Q4G0S7 254 aa22.03■■□□□ 1.12
CTSB-222ENST00000531551 RPAP2Q8IXW5 612 aaPredicted RBP22.03■■□□□ 1.12
CTSB-222ENST00000531551 SGIP1Q9BQI5 828 aa22.03■■□□□ 1.12
CTSB-222ENST00000531551 GREM2Q9H772 168 aa22.03■■□□□ 1.12
CTSB-222ENST00000531551 PNMA6EA0A0J9YXQ4 647 aa22.02■■□□□ 1.12
CTSB-222ENST00000531551 ATP8B2P98198 1209 aa22.02■■□□□ 1.12
CTSB-222ENST00000531551 FAM161AQ3B820 660 aa22.02■■□□□ 1.12
CTSB-222ENST00000531551 CSF1RP07333 972 aa22.01■■□□□ 1.11
CTSB-222ENST00000531551 PDE6BP35913 854 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms