RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 HDAC1Q13547 482 aaPredicted RBP17.45■□□□□ 0.38
NXF1-207ENST00000530875 RTL5Q5HYW3 569 aaPredicted RBP17.45■□□□□ 0.38
NXF1-207ENST00000530875 UBR3Q6ZT12 1888 aa17.45■□□□□ 0.38
NXF1-207ENST00000530875 BCL2L12Q9HB09 334 aa17.45■□□□□ 0.38
NXF1-207ENST00000530875 TFCP2L1Q9NZI6 479 aa17.45■□□□□ 0.38
NXF1-207ENST00000530875 UBN2Q6ZU65 1347 aa17.45■□□□□ 0.38
NXF1-207ENST00000530875 CLEC4GQ6UXB4 293 aa17.45■□□□□ 0.38
NXF1-207ENST00000530875 RPAP2Q8IXW5 612 aaPredicted RBP17.45■□□□□ 0.38
NXF1-207ENST00000530875 ANKRD44Q8N8A2 993 aa17.45■□□□□ 0.38
NXF1-207ENST00000530875 SUCLG2Q96I99 432 aa17.45■□□□□ 0.38
NXF1-207ENST00000530875 SCN7AQ01118 1682 aa17.44■□□□□ 0.38
NXF1-207ENST00000530875 USP42Q9H9J4 1324 aaKnown RBP17.44■□□□□ 0.38
NXF1-207ENST00000530875 ANKRD36CQ5JPF3 1778 aa17.44■□□□□ 0.38
NXF1-207ENST00000530875 H7C1W4 665 aa17.44■□□□□ 0.38
NXF1-207ENST00000530875 CASP7P55210 303 aa17.44■□□□□ 0.38
NXF1-207ENST00000530875 NIP7Q9Y221 180 aaKnown RBP eCLIP17.44■□□□□ 0.38
NXF1-207ENST00000530875 C4AP0C0L4 1744 aa17.44■□□□□ 0.38
NXF1-207ENST00000530875 CENPQQ7L2Z9 268 aaPredicted RBP17.43■□□□□ 0.38
NXF1-207ENST00000530875 CCDC125Q86Z20 511 aa17.43■□□□□ 0.38
NXF1-207ENST00000530875 KAZALD1Q96I82 304 aa17.43■□□□□ 0.38
NXF1-207ENST00000530875 HDAC5Q9UQL6 1122 aa17.43■□□□□ 0.38
NXF1-207ENST00000530875 RGL2O15211 777 aa17.43■□□□□ 0.38
NXF1-207ENST00000530875 FAM89AQ96GI7 184 aa17.42■□□□□ 0.38
NXF1-207ENST00000530875 PNMA6EA0A0J9YXQ4 647 aa17.41■□□□□ 0.38
NXF1-207ENST00000530875 FAM177BA6PVY3 158 aa17.41■□□□□ 0.38
NXF1-207ENST00000530875 PCCAP05165 728 aaPredicted RBP17.41■□□□□ 0.38
NXF1-207ENST00000530875 ATP8B2P98198 1209 aa17.41■□□□□ 0.38
NXF1-207ENST00000530875 SUSD4Q5VX71 490 aa17.41■□□□□ 0.38
NXF1-207ENST00000530875 TBC1D9BQ66K14 1250 aa17.41■□□□□ 0.38
NXF1-207ENST00000530875 BICDL1Q6ZP65 573 aa17.41■□□□□ 0.38
NXF1-207ENST00000530875 ZBTB38Q8NAP3 1195 aaPredicted RBP17.41■□□□□ 0.38
NXF1-207ENST00000530875 BICC1Q9H694 974 aaKnown RBP17.41■□□□□ 0.38
NXF1-207ENST00000530875 ANO8Q9HCE9 1232 aaPredicted RBP17.41■□□□□ 0.38
NXF1-207ENST00000530875 TRMT112Q9UI30 125 aaKnown RBP17.41■□□□□ 0.38
NXF1-207ENST00000530875 PARP10Q53GL7 1025 aa17.41■□□□□ 0.38
NXF1-207ENST00000530875 EPHA10Q5JZY3 1008 aa17.41■□□□□ 0.38
NXF1-207ENST00000530875 PPP1R42Q7Z4L9 355 aa17.4■□□□□ 0.38
NXF1-207ENST00000530875 SYNE4Q8N205 404 aa17.4■□□□□ 0.38
NXF1-207ENST00000530875 HMMRO75330 724 aa17.39■□□□□ 0.37
NXF1-207ENST00000530875 COL23A1Q86Y22 540 aaPredicted RBP17.39■□□□□ 0.37
NXF1-207ENST00000530875 SRGAP3O43295 1099 aa17.39■□□□□ 0.37
NXF1-207ENST00000530875 GYS1P13807 737 aa17.39■□□□□ 0.37
NXF1-207ENST00000530875 SLC15A2Q16348 729 aa17.39■□□□□ 0.37
NXF1-207ENST00000530875 UTP14AQ9BVJ6 771 aaKnown RBP17.39■□□□□ 0.37
NXF1-207ENST00000530875 STK32BQ9NY57 414 aa17.39■□□□□ 0.37
NXF1-207ENST00000530875 PNPLA7Q6ZV29 1317 aa17.38■□□□□ 0.37
NXF1-207ENST00000530875 MSH5O43196 834 aa17.38■□□□□ 0.37
NXF1-207ENST00000530875 MTX1Q13505 466 aa17.38■□□□□ 0.37
NXF1-207ENST00000530875 SETDB2Q96T68 719 aa17.38■□□□□ 0.37
NXF1-207ENST00000530875 TUBGCP6Q96RT7 1819 aa17.38■□□□□ 0.37
NXF1-207ENST00000530875 NTSR2O95665 410 aa17.37■□□□□ 0.37
NXF1-207ENST00000530875 FOXO4P98177 505 aa17.37■□□□□ 0.37
NXF1-207ENST00000530875 FLAD1Q8NFF5 587 aa17.37■□□□□ 0.37
NXF1-207ENST00000530875 CDHR2Q9BYE9 1310 aa17.37■□□□□ 0.37
NXF1-207ENST00000530875 POLA2Q14181 598 aa17.37■□□□□ 0.37
NXF1-207ENST00000530875 SMC5Q8IY18 1101 aa17.37■□□□□ 0.37
NXF1-207ENST00000530875 SSH3Q8TE77 659 aa17.37■□□□□ 0.37
NXF1-207ENST00000530875 SH3TC1Q8TE82 1336 aa17.36■□□□□ 0.37
NXF1-207ENST00000530875 IRS4O14654 1257 aaPredicted RBP17.36■□□□□ 0.37
NXF1-207ENST00000530875 RABL6Q3YEC7 729 aaPredicted RBP17.36■□□□□ 0.37
NXF1-207ENST00000530875 UPF1Q92900 1129 aaKnown RBP eCLIP17.36■□□□□ 0.37
NXF1-207ENST00000530875 DCTPP1Q9H773 170 aa17.36■□□□□ 0.37
NXF1-207ENST00000530875 NFIXQ14938 502 aa17.35■□□□□ 0.37
NXF1-207ENST00000530875 LMBR1LQ6UX01 489 aa17.35■□□□□ 0.37
NXF1-207ENST00000530875 NUTM1Q86Y26 1132 aa17.35■□□□□ 0.37
NXF1-207ENST00000530875 GCC1Q96CN9 775 aa17.35■□□□□ 0.37
NXF1-207ENST00000530875 PLA2G12BQ9BX93 195 aa17.35■□□□□ 0.37
NXF1-207ENST00000530875 CHMP3Q9Y3E7 222 aa17.34■□□□□ 0.37
NXF1-207ENST00000530875 HCLS1P14317 486 aaPredicted RBP17.33■□□□□ 0.37
NXF1-207ENST00000530875 SKAP1Q86WV1 359 aa17.33■□□□□ 0.37
NXF1-207ENST00000530875 NBPF5PQ86XG9 351 aaPredicted RBP17.33■□□□□ 0.37
NXF1-207ENST00000530875 ERFEQ4G0M1 354 aa17.33■□□□□ 0.36
NXF1-207ENST00000530875 EXOC6BQ9Y2D4 811 aa17.33■□□□□ 0.36
NXF1-207ENST00000530875 CARMIL3Q8ND23 1372 aa17.33■□□□□ 0.36
NXF1-207ENST00000530875 COL24A1Q17RW2 1714 aa17.33■□□□□ 0.36
NXF1-207ENST00000530875 PDE8AO60658 829 aa17.32■□□□□ 0.36
NXF1-207ENST00000530875 GTF2E1P29083 439 aaPredicted RBP17.32■□□□□ 0.36
NXF1-207ENST00000530875 CCDC85AQ96PX6 553 aaPredicted RBP17.32■□□□□ 0.36
NXF1-207ENST00000530875 NYXQ9GZU5 481 aa17.32■□□□□ 0.36
NXF1-207ENST00000530875 PDZRN3Q9UPQ7 1066 aa17.32■□□□□ 0.36
NXF1-207ENST00000530875 APBB1O00213 710 aa17.31■□□□□ 0.36
NXF1-207ENST00000530875 SURF6O75683 361 aaKnown RBP17.31■□□□□ 0.36
NXF1-207ENST00000530875 TM4SF1P30408 202 aa17.31■□□□□ 0.36
NXF1-207ENST00000530875 PA2G4Q9UQ80 394 aaKnown RBP17.31■□□□□ 0.36
NXF1-207ENST00000530875 CSF1RP07333 972 aa17.31■□□□□ 0.36
NXF1-207ENST00000530875 CTSWP56202 376 aa17.31■□□□□ 0.36
NXF1-207ENST00000530875 ANKRD45Q5TZF3 282 aa17.31■□□□□ 0.36
NXF1-207ENST00000530875 TPTE2Q6XPS3 522 aa17.31■□□□□ 0.36
NXF1-207ENST00000530875 NLGN1Q8N2Q7 840 aa17.31■□□□□ 0.36
NXF1-207ENST00000530875 KLHDC4Q8TBB5 520 aa17.31■□□□□ 0.36
NXF1-207ENST00000530875 RFX5P48382 616 aaPredicted RBP17.3■□□□□ 0.36
NXF1-207ENST00000530875 NUCB1Q02818 461 aa17.3■□□□□ 0.36
NXF1-207ENST00000530875 CCDC24Q8N4L8 307 aa17.3■□□□□ 0.36
NXF1-207ENST00000530875 TTLL11Q8NHH1 800 aa17.3■□□□□ 0.36
NXF1-207ENST00000530875 ABCC12Q96J65 1359 aa17.3■□□□□ 0.36
NXF1-207ENST00000530875 DDR1Q08345 913 aa17.29■□□□□ 0.36
NXF1-207ENST00000530875 FAM161AQ3B820 660 aa17.29■□□□□ 0.36
NXF1-207ENST00000530875 MSL1Q68DK7 614 aa17.29■□□□□ 0.36
NXF1-207ENST00000530875 NPHP1O15259 732 aa17.29■□□□□ 0.36
NXF1-207ENST00000530875 HSP90B1P14625 803 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms