RNA–Protein interactions for RNA: ENST00000530721.5

RPS3-216, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-216ENST00000530721 DNAJC5GQ8N7S2 189 aa16.72■□□□□ 0.27
RPS3-216ENST00000530721 DDX21Q9NR30 783 aaKnown RBP eCLIP16.72■□□□□ 0.275e-35■□□□□ 8.5
RPS3-216ENST00000530721 ZNF277Q9NRM2 450 aaPredicted RBP16.72■□□□□ 0.27
RPS3-216ENST00000530721 DDNO94850 711 aaPredicted RBP16.71■□□□□ 0.27
RPS3-216ENST00000530721 HOXB7P09629 217 aa16.71■□□□□ 0.27
RPS3-216ENST00000530721 AIMP1Q12904 312 aaKnown RBP16.71■□□□□ 0.27
RPS3-216ENST00000530721 CC2D2BQ6DHV5 1058 aa16.71■□□□□ 0.27
RPS3-216ENST00000530721 POTEDQ86YR6 584 aa16.71■□□□□ 0.27
RPS3-216ENST00000530721 XAGE3Q8WTP9 111 aa16.71■□□□□ 0.27
RPS3-216ENST00000530721 RBM17Q96I25 401 aaKnown RBP16.71■□□□□ 0.27
RPS3-216ENST00000530721 CFAP44Q96MT7 982 aa16.71■□□□□ 0.27
RPS3-216ENST00000530721 UTP14AQ9BVJ6 771 aaKnown RBP16.71■□□□□ 0.27
RPS3-216ENST00000530721 RNF123Q5XPI4 1314 aa16.7■□□□□ 0.26
RPS3-216ENST00000530721 HDGFL1Q5TGJ6 251 aa16.7■□□□□ 0.26
RPS3-216ENST00000530721 NLRP3Q96P20 1036 aa16.7■□□□□ 0.26
RPS3-216ENST00000530721 CRAMP1Q96RY5 1269 aa16.7■□□□□ 0.26
RPS3-216ENST00000530721 PSMD1Q99460 953 aa16.7■□□□□ 0.26
RPS3-216ENST00000530721 SNED1Q8TER0 1413 aa16.7■□□□□ 0.26
RPS3-216ENST00000530721 IARSP41252 1262 aaKnown RBP16.69■□□□□ 0.26
RPS3-216ENST00000530721 HTRA3P83110 453 aa16.69■□□□□ 0.26
RPS3-216ENST00000530721 GRIPAP1Q4V328 841 aa16.69■□□□□ 0.26
RPS3-216ENST00000530721 SYNE4Q8N205 404 aa16.69■□□□□ 0.26
RPS3-216ENST00000530721 CHPF2Q9P2E5 772 aa16.69■□□□□ 0.26
RPS3-216ENST00000530721 ANKRD36CQ5JPF3 1778 aa16.69■□□□□ 0.26
RPS3-216ENST00000530721 IQCA1LA6NCM1 817 aa16.68■□□□□ 0.26
RPS3-216ENST00000530721 TCIRG1Q13488 830 aa16.68■□□□□ 0.26
RPS3-216ENST00000530721 SLC10A5Q5PT55 438 aa16.68■□□□□ 0.26
RPS3-216ENST00000530721 C3orf67Q6ZVT6 689 aa16.68■□□□□ 0.26
RPS3-216ENST00000530721 L3MBTL3Q96JM7 780 aaPredicted RBP16.68■□□□□ 0.26
RPS3-216ENST00000530721 APAF1O14727 1248 aa16.67■□□□□ 0.26
RPS3-216ENST00000530721 PPEF1O14829 653 aaPredicted RBP16.67■□□□□ 0.26
RPS3-216ENST00000530721 CALD1Q05682 793 aaKnown RBP16.67■□□□□ 0.26
RPS3-216ENST00000530721 NLRP10Q86W26 655 aa16.67■□□□□ 0.26
RPS3-216ENST00000530721 KLRG1Q96E93 195 aa16.67■□□□□ 0.26
RPS3-216ENST00000530721 MBIPQ9NS73 344 aa16.67■□□□□ 0.26
RPS3-216ENST00000530721 DBF4Q9UBU7 674 aaPredicted RBP16.67■□□□□ 0.26
RPS3-216ENST00000530721 ZNF853P0CG23 659 aa16.66■□□□□ 0.26
RPS3-216ENST00000530721 DUSP27Q5VZP5 1158 aa16.66■□□□□ 0.26
RPS3-216ENST00000530721 JDP2Q8WYK2 163 aa16.66■□□□□ 0.26
RPS3-216ENST00000530721 IFT57Q9NWB7 429 aa16.66■□□□□ 0.26
RPS3-216ENST00000530721 ZNF541Q9H0D2 1346 aa16.66■□□□□ 0.26
RPS3-216ENST00000530721 SCN4AP35499 1836 aa16.66■□□□□ 0.26
RPS3-216ENST00000530721 FZD9O00144 591 aa16.65■□□□□ 0.26
RPS3-216ENST00000530721 ZEB1P37275 1124 aaPredicted RBP16.65■□□□□ 0.26
RPS3-216ENST00000530721 GNAI1P63096 354 aa16.65■□□□□ 0.26
RPS3-216ENST00000530721 PLBD2Q8NHP8 589 aa16.65■□□□□ 0.26
RPS3-216ENST00000530721 HYPKQ9NX55 129 aa16.65■□□□□ 0.26
RPS3-216ENST00000530721 TRMT112Q9UI30 125 aaKnown RBP16.65■□□□□ 0.26
RPS3-216ENST00000530721 SH3TC1Q8TE82 1336 aa16.65■□□□□ 0.26
RPS3-216ENST00000530721 CHADLQ6NUI6 762 aa16.64■□□□□ 0.25
RPS3-216ENST00000530721 ANKRD13DQ6ZTN6 518 aa16.64■□□□□ 0.25
RPS3-216ENST00000530721 TMX4Q9H1E5 349 aaPredicted RBP16.64■□□□□ 0.25
RPS3-216ENST00000530721 TCERG1O14776 1098 aaKnown RBP16.63■□□□□ 0.25
RPS3-216ENST00000530721 POTEIP0CG38 1075 aa16.63■□□□□ 0.25
RPS3-216ENST00000530721 POTEJP0CG39 1038 aa16.63■□□□□ 0.25
RPS3-216ENST00000530721 HCLS1P14317 486 aaPredicted RBP16.63■□□□□ 0.25
RPS3-216ENST00000530721 TAF1DQ9H5J8 278 aaPredicted RBP16.63■□□□□ 0.25
RPS3-216ENST00000530721 ATP6V0A2Q9Y487 856 aa16.63■□□□□ 0.25
RPS3-216ENST00000530721 ABCC4O15439 1325 aa16.63■□□□□ 0.25
RPS3-216ENST00000530721 LDHDQ86WU2 507 aa16.62■□□□□ 0.25
RPS3-216ENST00000530721 GPC2Q8N158 579 aa16.62■□□□□ 0.25
RPS3-216ENST00000530721 LARGE2Q8N3Y3 721 aa16.62■□□□□ 0.25
RPS3-216ENST00000530721 JMYQ8N9B5 988 aa16.62■□□□□ 0.25
RPS3-216ENST00000530721 HACL1Q9UJ83 578 aa16.62■□□□□ 0.25
RPS3-216ENST00000530721 LAMB2P55268 1798 aa16.61■□□□□ 0.25
RPS3-216ENST00000530721 BBOX1O75936 387 aa16.61■□□□□ 0.25
RPS3-216ENST00000530721 EIF6P56537 245 aaKnown RBP16.61■□□□□ 0.25
RPS3-216ENST00000530721 DDX46Q7L014 1031 aaKnown RBP16.61■□□□□ 0.25
RPS3-216ENST00000530721 SLC51AQ86UW1 340 aa16.61■□□□□ 0.25
RPS3-216ENST00000530721 ISCA1Q9BUE6 129 aa16.61■□□□□ 0.25
RPS3-216ENST00000530721 COL4A5P29400 1685 aa16.6■□□□□ 0.25
RPS3-216ENST00000530721 EPHX2P34913 555 aa16.6■□□□□ 0.25
RPS3-216ENST00000530721 VPS33BQ9H267 617 aa16.6■□□□□ 0.25
RPS3-216ENST00000530721 ATP5J2-PTCD1G3V325 749 aa16.59■□□□□ 0.25
RPS3-216ENST00000530721 ELL2O00472 640 aaPredicted RBP16.59■□□□□ 0.25
RPS3-216ENST00000530721 PPIP5K2O43314 1243 aa16.59■□□□□ 0.25
RPS3-216ENST00000530721 GRAPQ13588 217 aa16.59■□□□□ 0.25
RPS3-216ENST00000530721 CCDC184Q52MB2 194 aa16.59■□□□□ 0.25
RPS3-216ENST00000530721 EAPPQ56P03 285 aaPredicted RBP16.59■□□□□ 0.25
RPS3-216ENST00000530721 PNMA8AQ86V59 439 aaPredicted RBP16.59■□□□□ 0.25
RPS3-216ENST00000530721 SP8Q8IXZ3 490 aa16.59■□□□□ 0.25
RPS3-216ENST00000530721 SUPT20HQ8NEM7 779 aa16.59■□□□□ 0.25
RPS3-216ENST00000530721 GRAPLQ8TC17 118 aaPredicted RBP16.59■□□□□ 0.25
RPS3-216ENST00000530721 GOLGA2Q08379 1002 aa16.58■□□□□ 0.24
RPS3-216ENST00000530721 TRIM28Q13263 835 aaKnown RBP16.58■□□□□ 0.24
RPS3-216ENST00000530721 NIM1KQ8IY84 436 aa16.58■□□□□ 0.24
RPS3-216ENST00000530721 ZNF428Q96B54 188 aa16.58■□□□□ 0.24
RPS3-216ENST00000530721 FAM89AQ96GI7 184 aa16.58■□□□□ 0.24
RPS3-216ENST00000530721 RTFDC1Q9BY42 306 aaPredicted RBP16.58■□□□□ 0.24
RPS3-216ENST00000530721 CHMP4AQ9BY43 222 aa16.58■□□□□ 0.24
RPS3-216ENST00000530721 CREBZFQ9NS37 354 aa16.58■□□□□ 0.24
RPS3-216ENST00000530721 GJA3Q9Y6H8 435 aa16.58■□□□□ 0.24
RPS3-216ENST00000530721 AOC3Q16853 763 aa16.57■□□□□ 0.24
RPS3-216ENST00000530721 DPP8Q6V1X1 898 aaPredicted RBP16.57■□□□□ 0.24
RPS3-216ENST00000530721 TMC4Q7Z404 712 aa16.57■□□□□ 0.24
RPS3-216ENST00000530721 RIC3Q7Z5B4 369 aa16.57■□□□□ 0.24
RPS3-216ENST00000530721 C8orf58Q8NAV2 365 aa16.57■□□□□ 0.24
RPS3-216ENST00000530721 PHAXQ9H814 394 aaKnown RBP16.57■□□□□ 0.24
RPS3-216ENST00000530721 PCNTO95613 3336 aa16.57■□□□□ 0.24
RPS3-216ENST00000530721 DDX60Q8IY21 1712 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms