RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 ADAMTS12P58397 1594 aa8.78□□□□□ -1
CTNND1-223ENST00000529986 LARP1Q6PKG0 1096 aaKnown RBP8.78□□□□□ -1
CTNND1-223ENST00000529986 KRBA2Q6ZNG9 492 aa8.78□□□□□ -1
CTNND1-223ENST00000529986 DACT1Q9NYF0 836 aa8.78□□□□□ -1
CTNND1-223ENST00000529986 ZEB2O60315 1214 aa8.78□□□□□ -1
CTNND1-223ENST00000529986 SYT10Q6XYQ8 523 aa8.78□□□□□ -1
CTNND1-223ENST00000529986 FAM200AQ8TCP9 573 aa8.78□□□□□ -1
CTNND1-223ENST00000529986 MSL1Q68DK7 614 aa8.78□□□□□ -1
CTNND1-223ENST00000529986 C17orf53Q8N3J3 647 aaPredicted RBP8.78□□□□□ -1
CTNND1-223ENST00000529986 KRI1Q8N9T8 703 aaKnown RBP8.78□□□□□ -1
CTNND1-223ENST00000529986 TSG101Q99816 390 aa8.78□□□□□ -1
CTNND1-223ENST00000529986 RASSF4Q9H2L5 321 aa8.78□□□□□ -1
CTNND1-223ENST00000529986 OGFRQ9NZT2 677 aa8.78□□□□□ -1
CTNND1-223ENST00000529986 RHOXF2BP0C7M4 288 aa8.78□□□□□ -1
CTNND1-223ENST00000529986 KARSQ15046 597 aaKnown RBP8.78□□□□□ -1
CTNND1-223ENST00000529986 RHOXF2Q9BQY4 288 aa8.78□□□□□ -1
CTNND1-223ENST00000529986 N4BP3O15049 544 aa8.77□□□□□ -1
CTNND1-223ENST00000529986 DNM1Q05193 864 aaKnown RBP8.77□□□□□ -1
CTNND1-223ENST00000529986 CCDC6Q16204 474 aa8.77□□□□□ -1
CTNND1-223ENST00000529986 VPS36Q86VN1 386 aa8.77□□□□□ -1
CTNND1-223ENST00000529986 KLHL34Q8N239 644 aa8.77□□□□□ -1
CTNND1-223ENST00000529986 PAIP2Q9BPZ3 127 aaKnown RBP8.77□□□□□ -1
CTNND1-223ENST00000529986 TCOF1Q13428 1488 aaKnown RBP8.77□□□□□ -1
CTNND1-223ENST00000529986 NSD3Q9BZ95 1437 aa8.77□□□□□ -1
CTNND1-223ENST00000529986 CCDC160A6NGH7 325 aa8.77□□□□□ -1.01
CTNND1-223ENST00000529986 SYT1P21579 422 aa8.77□□□□□ -1.01
CTNND1-223ENST00000529986 CABP4P57796 275 aa8.77□□□□□ -1.01
CTNND1-223ENST00000529986 TTC22Q5TAA0 569 aa8.77□□□□□ -1.01
CTNND1-223ENST00000529986 WWC2Q6AWC2 1192 aa8.77□□□□□ -1.01
CTNND1-223ENST00000529986 CAPZA3Q96KX2 299 aa8.77□□□□□ -1.01
CTNND1-223ENST00000529986 GPATCH8Q9UKJ3 1502 aaKnown RBP8.77□□□□□ -1.01
CTNND1-223ENST00000529986 ZNF692Q9BU19 519 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-223ENST00000529986 CETN2P41208 172 aa8.77□□□□□ -1.01
CTNND1-223ENST00000529986 OTUD6BQ8N6M0 293 aa8.77□□□□□ -1.01
CTNND1-223ENST00000529986 LRRC2Q9BYS8 371 aa8.77□□□□□ -1.01
CTNND1-223ENST00000529986 PCDHB15Q9Y5E8 787 aa8.77□□□□□ -1.01
CTNND1-223ENST00000529986 RTEL1-TNFRSF6BF6WH68 1400 aa8.77□□□□□ -1.01
CTNND1-223ENST00000529986 KIAA0556O60303 1618 aa8.77□□□□□ -1.01
CTNND1-223ENST00000529986 EBAG9O00559 213 aa8.77□□□□□ -1.01
CTNND1-223ENST00000529986 SEC24BO95487 1268 aa8.77□□□□□ -1.01
CTNND1-223ENST00000529986 HMGB1P09429 215 aaKnown RBP8.77□□□□□ -1.01
CTNND1-223ENST00000529986 ANAPC15P60006 121 aa8.77□□□□□ -1.01
CTNND1-223ENST00000529986 HAND2P61296 217 aa8.77□□□□□ -1.01
CTNND1-223ENST00000529986 GOLGA8AA7E2F4 631 aa8.76□□□□□ -1.01
CTNND1-223ENST00000529986 PPP1R12BO60237 982 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-223ENST00000529986 IFIT1P09914 478 aaKnown RBP8.76□□□□□ -1.01
CTNND1-223ENST00000529986 TAF7Q15545 349 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-223ENST00000529986 USP16Q9Y5T5 823 aa8.76□□□□□ -1.01
CTNND1-223ENST00000529986 SLC12A7Q9Y666 1083 aa8.76□□□□□ -1.01
CTNND1-223ENST00000529986 LMOD1P29536 600 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-223ENST00000529986 SSRP1Q08945 709 aaKnown RBP8.76□□□□□ -1.01
CTNND1-223ENST00000529986 ESCO1Q5FWF5 840 aa8.76□□□□□ -1.01
CTNND1-223ENST00000529986 ALDH1L2Q3SY69 923 aa8.76□□□□□ -1.01
CTNND1-223ENST00000529986 HOOK3Q86VS8 718 aa8.76□□□□□ -1.01
CTNND1-223ENST00000529986 RABEP2Q9H5N1 569 aa8.76□□□□□ -1.01
CTNND1-223ENST00000529986 NEBLO76041 1014 aa8.76□□□□□ -1.01
CTNND1-223ENST00000529986 IDEP14735 1019 aa8.76□□□□□ -1.01
CTNND1-223ENST00000529986 SDSP20132 328 aa8.76□□□□□ -1.01
CTNND1-223ENST00000529986 AFMP43652 599 aa8.76□□□□□ -1.01
CTNND1-223ENST00000529986 TCERG1LQ5VWI1 586 aa8.76□□□□□ -1.01
CTNND1-223ENST00000529986 CCDC102BQ68D86 513 aa8.76□□□□□ -1.01
CTNND1-223ENST00000529986 CCDC121Q6ZUS5 278 aa8.76□□□□□ -1.01
CTNND1-223ENST00000529986 ZGPATQ8N5A5 531 aaKnown RBP8.76□□□□□ -1.01
CTNND1-223ENST00000529986 GOLGA1Q92805 767 aa8.76□□□□□ -1.01
CTNND1-223ENST00000529986 LZTFL1Q9NQ48 299 aa8.76□□□□□ -1.01
CTNND1-223ENST00000529986 STRN4Q9NRL3 753 aa8.76□□□□□ -1.01
CTNND1-223ENST00000529986 ORC3Q9UBD5 711 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-223ENST00000529986 AKR1B10O60218 316 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 NAA25Q14CX7 972 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 CD109Q6YHK3 1445 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 ZNF213O14771 459 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 GBP6Q6ZN66 633 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 NAPBQ9H115 298 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 POGZQ7Z3K3 1410 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 WDR62O43379 1518 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 IFIT3O14879 490 aaKnown RBP8.75□□□□□ -1.01
CTNND1-223ENST00000529986 RANBP6O60518 1105 aaKnown RBP8.75□□□□□ -1.01
CTNND1-223ENST00000529986 STAMBPO95630 424 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 TATP17735 454 aaPredicted RBP8.75□□□□□ -1.01
CTNND1-223ENST00000529986 PPARDQ03181 441 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 FAM160A1Q05DH4 1040 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 TYRO3Q06418 890 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 CCDC40Q4G0X9 1142 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 METTL24Q5JXM2 366 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 NBPF11Q86T75 865 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 PUS7Q96PZ0 661 aaKnown RBP8.75□□□□□ -1.01
CTNND1-223ENST00000529986 RBSNQ9H1K0 784 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 SYKP43405 635 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 TERF1P54274 439 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 CCDC114Q96M63 670 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 TAOK3Q9H2K8 898 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 SCAF11Q99590 1463 aaKnown RBP8.75□□□□□ -1.01
CTNND1-223ENST00000529986 FSD2A1L4K1 749 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 SMIM23A6NLE4 172 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 TRIM21P19474 475 aaKnown RBP8.75□□□□□ -1.01
CTNND1-223ENST00000529986 NLRP5P59047 1200 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 MICU3Q86XE3 530 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 TSC1Q92574 1164 aa8.75□□□□□ -1.01
CTNND1-223ENST00000529986 RIOK3O14730 519 aaKnown RBP8.74□□□□□ -1.01
CTNND1-223ENST00000529986 RBM5P52756 815 aaKnown RBP eCLIP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms