RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 C11orf16Q9NQ32 467 aa6.83□□□□□ -1.32
CTR9-205ENST00000529898 BCS1LQ9Y276 419 aa6.83□□□□□ -1.32
CTR9-205ENST00000529898 KRBA1A5PL33 1030 aa6.82□□□□□ -1.32
CTR9-205ENST00000529898 TGFBR3LH3BV60 316 aa6.82□□□□□ -1.32
CTR9-205ENST00000529898 FAM69CQ0P6D2 419 aa6.82□□□□□ -1.32
CTR9-205ENST00000529898 SWI5Q1ZZU3 235 aa6.82□□□□□ -1.32
CTR9-205ENST00000529898 GPAT2Q6NUI2 795 aa6.82□□□□□ -1.32
CTR9-205ENST00000529898 CHMP7Q8WUX9 453 aaPredicted RBP6.82□□□□□ -1.32
CTR9-205ENST00000529898 SUV39H2Q9H5I1 410 aa6.82□□□□□ -1.32
CTR9-205ENST00000529898 PRDM6Q9NQX0 595 aa6.82□□□□□ -1.32
CTR9-205ENST00000529898 PROCP04070 461 aa6.81□□□□□ -1.32
CTR9-205ENST00000529898 ACIN1Q9UKV3 1341 aaKnown RBP6.8□□□□□ -1.32
CTR9-205ENST00000529898 ATG7O95352 703 aa6.8□□□□□ -1.32
CTR9-205ENST00000529898 ALAS2P22557 587 aa6.8□□□□□ -1.32
CTR9-205ENST00000529898 RFX1P22670 979 aa6.8□□□□□ -1.32
CTR9-205ENST00000529898 NEUROD1Q13562 356 aa6.8□□□□□ -1.32
CTR9-205ENST00000529898 COL9A3Q14050 684 aaPredicted RBP6.8□□□□□ -1.32
CTR9-205ENST00000529898 SPOCK3Q9BQ16 436 aa6.8□□□□□ -1.32
CTR9-205ENST00000529898 QTRT2Q9H974 415 aaKnown RBP6.8□□□□□ -1.32
CTR9-205ENST00000529898 NOP53Q9NZM5 478 aaKnown RBP6.8□□□□□ -1.32
CTR9-205ENST00000529898 ZMIZ1Q9ULJ6 1067 aa6.8□□□□□ -1.32
CTR9-205ENST00000529898 NOVA2Q9UNW9 492 aaKnown RBP6.8□□□□□ -1.32
CTR9-205ENST00000529898 STARD13Q9Y3M8 1113 aa6.8□□□□□ -1.32
CTR9-205ENST00000529898 MSTNO14793 375 aa6.79□□□□□ -1.32
CTR9-205ENST00000529898 LGR5O75473 907 aa6.79□□□□□ -1.32
CTR9-205ENST00000529898 GRNP28799 593 aaKnown RBP6.79□□□□□ -1.32
CTR9-205ENST00000529898 INPP5BP32019 993 aa6.79□□□□□ -1.32
CTR9-205ENST00000529898 OCLNQ16625 522 aa6.79□□□□□ -1.32
CTR9-205ENST00000529898 C20orf204Q6ZNR8 217 aa6.79□□□□□ -1.32
CTR9-205ENST00000529898 TRIM11Q96F44 468 aa6.79□□□□□ -1.32
CTR9-205ENST00000529898 NGLY1Q96IV0 654 aa6.79□□□□□ -1.32
CTR9-205ENST00000529898 GSX2Q9BZM3 304 aa6.79□□□□□ -1.32
CTR9-205ENST00000529898 C11orf91Q3C1V1 193 aa6.78□□□□□ -1.32
CTR9-205ENST00000529898 CDCA8Q53HL2 280 aa6.78□□□□□ -1.32
CTR9-205ENST00000529898 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.78□□□□□ -1.32
CTR9-205ENST00000529898 ADH7P40394 386 aa6.77□□□□□ -1.33
CTR9-205ENST00000529898 SUZ12Q15022 739 aaKnown RBP6.77□□□□□ -1.33
CTR9-205ENST00000529898 MICALL1Q8N3F8 863 aa6.77□□□□□ -1.33
CTR9-205ENST00000529898 COL26A1Q96A83 441 aa6.77□□□□□ -1.33
CTR9-205ENST00000529898 FKBP5Q13451 457 aaPredicted RBP6.76□□□□□ -1.33
CTR9-205ENST00000529898 CCINQ13939 588 aa6.76□□□□□ -1.33
CTR9-205ENST00000529898 ILDR2Q71H61 639 aa6.76□□□□□ -1.33
CTR9-205ENST00000529898 PLVAPQ9BX97 442 aa6.76□□□□□ -1.33
CTR9-205ENST00000529898 KLK14Q9P0G3 267 aa6.76□□□□□ -1.33
CTR9-205ENST00000529898 LRFN2Q9ULH4 789 aa6.76□□□□□ -1.33
CTR9-205ENST00000529898 GTF3C3Q9Y5Q9 886 aa6.76□□□□□ -1.33
CTR9-205ENST00000529898 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.75□□□□□ -1.33
CTR9-205ENST00000529898 OPLAHO14841 1288 aa6.75□□□□□ -1.33
CTR9-205ENST00000529898 MICAL2O94851 1124 aa6.75□□□□□ -1.33
CTR9-205ENST00000529898 MAP3K6O95382 1288 aa6.75□□□□□ -1.33
CTR9-205ENST00000529898 ALBP02768 609 aa6.75□□□□□ -1.33
CTR9-205ENST00000529898 IDH3AP50213 366 aa6.75□□□□□ -1.33
CTR9-205ENST00000529898 DGKZQ13574 1117 aa6.75□□□□□ -1.33
CTR9-205ENST00000529898 RAB44Q7Z6P3 723 aaPredicted RBP6.75□□□□□ -1.33
CTR9-205ENST00000529898 BHMTQ93088 406 aa6.75□□□□□ -1.33
CTR9-205ENST00000529898 SERPINA10Q9UK55 444 aa6.75□□□□□ -1.33
CTR9-205ENST00000529898 LOC100996750A0A140TA64 210 aa6.74□□□□□ -1.33
CTR9-205ENST00000529898 M0R082 166 aa6.74□□□□□ -1.33
CTR9-205ENST00000529898 EGFRP00533 1210 aa6.74□□□□□ -1.33
CTR9-205ENST00000529898 NID1P14543 1247 aa6.74□□□□□ -1.33
CTR9-205ENST00000529898 EPB42P16452 691 aa6.74□□□□□ -1.33
CTR9-205ENST00000529898 ARSDP51689 593 aa6.74□□□□□ -1.33
CTR9-205ENST00000529898 COX20Q5RI15 118 aa6.74□□□□□ -1.33
CTR9-205ENST00000529898 CD163Q86VB7 1156 aa6.74□□□□□ -1.33
CTR9-205ENST00000529898 ZNF417Q8TAU3 575 aa6.74□□□□□ -1.33
CTR9-205ENST00000529898 STK32AQ8WU08 396 aa6.74□□□□□ -1.33
CTR9-205ENST00000529898 PBXIP1Q96AQ6 731 aa6.74□□□□□ -1.33
CTR9-205ENST00000529898 ZNF587Q96SQ5 575 aaPredicted RBP6.74□□□□□ -1.33
CTR9-205ENST00000529898 KRTAP4-6Q9BYQ5 205 aa6.74□□□□□ -1.33
CTR9-205ENST00000529898 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.74□□□□□ -1.33
CTR9-205ENST00000529898 C1QTNF9BB2RNN3 333 aa6.73□□□□□ -1.33
CTR9-205ENST00000529898 SPATA31C1P0DKV0 1188 aa6.73□□□□□ -1.33
CTR9-205ENST00000529898 CLP1Q92989 425 aaKnown RBP6.73□□□□□ -1.33
CTR9-205ENST00000529898 VTI1AQ96AJ9 217 aa6.73□□□□□ -1.33
CTR9-205ENST00000529898 IFT43Q96FT9 208 aa6.73□□□□□ -1.33
CTR9-205ENST00000529898 PRIMPOLQ96LW4 560 aa6.73□□□□□ -1.33
CTR9-205ENST00000529898 CXXC1Q9P0U4 656 aaPredicted RBP6.73□□□□□ -1.33
CTR9-205ENST00000529898 SPDYE3A6NKU9 549 aa6.72□□□□□ -1.33
CTR9-205ENST00000529898 SLC6A14Q9UN76 642 aa6.72□□□□□ -1.33
CTR9-205ENST00000529898 CHRNA4P43681 627 aa6.71□□□□□ -1.34
CTR9-205ENST00000529898 BAG6P46379 1132 aa6.71□□□□□ -1.34
CTR9-205ENST00000529898 PCSK7Q16549 785 aa6.71□□□□□ -1.34
CTR9-205ENST00000529898 TMEM164Q5U3C3 297 aa6.71□□□□□ -1.34
CTR9-205ENST00000529898 TRPM4Q8TD43 1214 aa6.71□□□□□ -1.34
CTR9-205ENST00000529898 DNAJB12Q9NXW2 375 aaKnown RBP6.71□□□□□ -1.34
CTR9-205ENST00000529898 ZFATQ9P243 1243 aa6.71□□□□□ -1.34
CTR9-205ENST00000529898 PRMT3O60678 531 aa6.7□□□□□ -1.34
CTR9-205ENST00000529898 LILRB5O75023 590 aa6.7□□□□□ -1.34
CTR9-205ENST00000529898 ADAM23O75077 832 aa6.7□□□□□ -1.34
CTR9-205ENST00000529898 NFKB1P19838 968 aa6.7□□□□□ -1.34
CTR9-205ENST00000529898 C8orf86Q6ZUL3 223 aa6.7□□□□□ -1.34
CTR9-205ENST00000529898 TTC9Q92623 222 aa6.7□□□□□ -1.34
CTR9-205ENST00000529898 CCDC97Q96F63 343 aaPredicted RBP6.7□□□□□ -1.34
CTR9-205ENST00000529898 UBE2OQ9C0C9 1292 aaKnown RBP6.7□□□□□ -1.34
CTR9-205ENST00000529898 RTCBQ9Y3I0 505 aaKnown RBP6.7□□□□□ -1.34
CTR9-205ENST00000529898 ZBTB42B2RXF5 422 aa6.69□□□□□ -1.34
CTR9-205ENST00000529898 PTCD1O75127 700 aaKnown RBP6.69□□□□□ -1.34
CTR9-205ENST00000529898 HOXD8P13378 290 aaPredicted RBP6.69□□□□□ -1.34
CTR9-205ENST00000529898 C16orf46Q6P387 395 aa6.69□□□□□ -1.34
CTR9-205ENST00000529898 TREML1Q86YW5 311 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms