RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 SMARCC1Q92922 1105 aaPredicted RBP9.59□□□□□ -0.87
ITGB1-218ENST00000528877 CCNL1Q9UK58 526 aaPredicted RBP9.59□□□□□ -0.87
ITGB1-218ENST00000528877 UTRNP46939 3433 aa9.59□□□□□ -0.87
ITGB1-218ENST00000528877 FECHP22830 423 aa9.58□□□□□ -0.88
ITGB1-218ENST00000528877 FAM161AQ3B820 660 aa9.58□□□□□ -0.88
ITGB1-218ENST00000528877 SLC16A10Q8TF71 515 aa9.58□□□□□ -0.88
ITGB1-218ENST00000528877 GOLGB1Q14789 3259 aaKnown RBP9.58□□□□□ -0.88
ITGB1-218ENST00000528877 UBR3Q6ZT12 1888 aa9.57□□□□□ -0.88
ITGB1-218ENST00000528877 COL5A3P25940 1745 aaPredicted RBP9.57□□□□□ -0.88
ITGB1-218ENST00000528877 ERVV-2B6SEH9 535 aa9.57□□□□□ -0.88
ITGB1-218ENST00000528877 ZBTB7AO95365 584 aa9.57□□□□□ -0.88
ITGB1-218ENST00000528877 HSP90AB1P08238 724 aaKnown RBP9.57□□□□□ -0.88
ITGB1-218ENST00000528877 AEBP1Q8IUX7 1158 aa9.57□□□□□ -0.88
ITGB1-218ENST00000528877 PIGBQ92521 554 aa9.57□□□□□ -0.88
ITGB1-218ENST00000528877 DCAF5Q96JK2 942 aa9.57□□□□□ -0.88
ITGB1-218ENST00000528877 SCN11AQ9UI33 1791 aa9.57□□□□□ -0.88
ITGB1-218ENST00000528877 KAT6BQ8WYB5 2073 aa9.57□□□□□ -0.88
ITGB1-218ENST00000528877 MTHFSP49914 203 aa9.56□□□□□ -0.88
ITGB1-218ENST00000528877 KCNC4Q03721 635 aa9.56□□□□□ -0.88
ITGB1-218ENST00000528877 KMT5BQ4FZB7 885 aa9.56□□□□□ -0.88
ITGB1-218ENST00000528877 PLEKHO1Q53GL0 409 aaPredicted RBP9.56□□□□□ -0.88
ITGB1-218ENST00000528877 MPRIPQ6WCQ1 1025 aa9.56□□□□□ -0.88
ITGB1-218ENST00000528877 Q6ZNB5 142 aa9.56□□□□□ -0.88
ITGB1-218ENST00000528877 TMOD3Q9NYL9 352 aa9.56□□□□□ -0.88
ITGB1-218ENST00000528877 PPP1R1BQ9UD71 204 aaPredicted RBP9.56□□□□□ -0.88
ITGB1-218ENST00000528877 IRF6O14896 467 aa9.55□□□□□ -0.88
ITGB1-218ENST00000528877 ZNF530Q6P9A1 599 aaPredicted RBP9.55□□□□□ -0.88
ITGB1-218ENST00000528877 SULF1Q8IWU6 871 aa9.55□□□□□ -0.88
ITGB1-218ENST00000528877 TFCP2L1Q9NZI6 479 aa9.55□□□□□ -0.88
ITGB1-218ENST00000528877 DAXXQ9UER7 740 aaPredicted RBP9.55□□□□□ -0.88
ITGB1-218ENST00000528877 KCNQ4P56696 695 aa9.54□□□□□ -0.88
ITGB1-218ENST00000528877 CC2D1BQ5T0F9 858 aaKnown RBP9.54□□□□□ -0.88
ITGB1-218ENST00000528877 SULT6B1Q6IMI4 303 aa9.54□□□□□ -0.88
ITGB1-218ENST00000528877 FLAD1Q8NFF5 587 aa9.54□□□□□ -0.88
ITGB1-218ENST00000528877 TJP1Q07157 1748 aa9.53□□□□□ -0.88
ITGB1-218ENST00000528877 LOC102724428A0A0B4J2F2 783 aa9.53□□□□□ -0.88
ITGB1-218ENST00000528877 DIAPH1O60610 1272 aaKnown RBP9.53□□□□□ -0.88
ITGB1-218ENST00000528877 SIK1P57059 783 aa9.53□□□□□ -0.88
ITGB1-218ENST00000528877 C1orf141Q5JVX7 400 aa9.53□□□□□ -0.88
ITGB1-218ENST00000528877 ATG3Q9NT62 314 aa9.53□□□□□ -0.88
ITGB1-218ENST00000528877 ASAP1Q9ULH1 1129 aa9.53□□□□□ -0.88
ITGB1-218ENST00000528877 UBR2Q8IWV8 1755 aa9.52□□□□□ -0.88
ITGB1-218ENST00000528877 SSFA2P28290 1259 aa9.52□□□□□ -0.89
ITGB1-218ENST00000528877 APLP1P51693 650 aa9.52□□□□□ -0.89
ITGB1-218ENST00000528877 AKAP4Q5JQC9 854 aa9.52□□□□□ -0.89
ITGB1-218ENST00000528877 LINC00116Q8NCU8 138 aa9.52□□□□□ -0.89
ITGB1-218ENST00000528877 ARXQ96QS3 562 aa9.52□□□□□ -0.89
ITGB1-218ENST00000528877 FHDC1Q9C0D6 1143 aaPredicted RBP9.52□□□□□ -0.89
ITGB1-218ENST00000528877 IL21Q9HBE4 155 aa9.52□□□□□ -0.89
ITGB1-218ENST00000528877 VIRMAQ69YN4 1812 aaKnown RBP9.52□□□□□ -0.89
ITGB1-218ENST00000528877 KCPQ6ZWJ8 1503 aa9.51□□□□□ -0.89
ITGB1-218ENST00000528877 SIPA1L3O60292 1781 aaPredicted RBP9.51□□□□□ -0.89
ITGB1-218ENST00000528877 POLD1P28340 1107 aa9.51□□□□□ -0.89
ITGB1-218ENST00000528877 ITPK1Q13572 414 aa9.51□□□□□ -0.89
ITGB1-218ENST00000528877 AMIGO3Q86WK7 504 aa9.51□□□□□ -0.89
ITGB1-218ENST00000528877 COL23A1Q86Y22 540 aaPredicted RBP9.51□□□□□ -0.89
ITGB1-218ENST00000528877 AK7Q96M32 723 aa9.51□□□□□ -0.89
ITGB1-218ENST00000528877 CNTNAP4Q9C0A0 1308 aa9.51□□□□□ -0.89
ITGB1-218ENST00000528877 C4AP0C0L4 1744 aa9.51□□□□□ -0.89
ITGB1-218ENST00000528877 CFHP08603 1231 aa9.5□□□□□ -0.89
ITGB1-218ENST00000528877 SLC4A9Q96Q91 983 aa9.5□□□□□ -0.89
ITGB1-218ENST00000528877 MTRQ99707 1265 aa9.5□□□□□ -0.89
ITGB1-218ENST00000528877 SYT17Q9BSW7 474 aa9.5□□□□□ -0.89
ITGB1-218ENST00000528877 ACTN4O43707 911 aaKnown RBP9.49□□□□□ -0.89
ITGB1-218ENST00000528877 ZMYND10O75800 440 aa9.49□□□□□ -0.89
ITGB1-218ENST00000528877 CABP4P57796 275 aa9.49□□□□□ -0.89
ITGB1-218ENST00000528877 TJAP1Q5JTD0 557 aa9.49□□□□□ -0.89
ITGB1-218ENST00000528877 RC3H1Q5TC82 1133 aaKnown RBP9.49□□□□□ -0.89
ITGB1-218ENST00000528877 KRI1Q8N9T8 703 aaKnown RBP9.49□□□□□ -0.89
ITGB1-218ENST00000528877 ZC3H15Q8WU90 426 aaKnown RBP9.49□□□□□ -0.89
ITGB1-218ENST00000528877 CCDC102AQ96A19 550 aa9.49□□□□□ -0.89
ITGB1-218ENST00000528877 SLC52A2Q9HAB3 445 aa9.49□□□□□ -0.89
ITGB1-218ENST00000528877 PCDHB3Q9Y5E6 796 aa9.49□□□□□ -0.89
ITGB1-218ENST00000528877 CEMIPQ8WUJ3 1361 aa9.49□□□□□ -0.89
ITGB1-218ENST00000528877 HMOX1P09601 288 aa9.48□□□□□ -0.89
ITGB1-218ENST00000528877 PPP2R1AP30153 589 aa9.48□□□□□ -0.89
ITGB1-218ENST00000528877 ATP6V1AP38606 617 aa9.48□□□□□ -0.89
ITGB1-218ENST00000528877 MTHFSDQ2M296 383 aaKnown RBP9.48□□□□□ -0.89
ITGB1-218ENST00000528877 CFAP53Q96M91 514 aa9.48□□□□□ -0.89
ITGB1-218ENST00000528877 KIF13BQ9NQT8 1826 aa9.47□□□□□ -0.89
ITGB1-218ENST00000528877 MYH14Q7Z406 1995 aaKnown RBP9.47□□□□□ -0.89
ITGB1-218ENST00000528877 RNMTO43148 476 aaKnown RBP9.47□□□□□ -0.89
ITGB1-218ENST00000528877 RDH13Q8NBN7 331 aa9.47□□□□□ -0.89
ITGB1-218ENST00000528877 NFATC2IPQ8NCF5 419 aa9.47□□□□□ -0.89
ITGB1-218ENST00000528877 GAS2L2Q8NHY3 880 aa9.47□□□□□ -0.89
ITGB1-218ENST00000528877 RSPH6AQ9H0K4 717 aa9.47□□□□□ -0.89
ITGB1-218ENST00000528877 SLC10A3P09131 477 aa9.46□□□□□ -0.9
ITGB1-218ENST00000528877 PHOX2BQ99453 314 aa9.46□□□□□ -0.9
ITGB1-218ENST00000528877 KIAA1551Q9HCM1 1747 aa9.45□□□□□ -0.9
ITGB1-218ENST00000528877 DDX11L8A8MPP1 907 aa9.45□□□□□ -0.9
ITGB1-218ENST00000528877 CLCN1P35523 988 aa9.45□□□□□ -0.9
ITGB1-218ENST00000528877 LGR6Q9HBX8 967 aa9.45□□□□□ -0.9
ITGB1-218ENST00000528877 CD2APQ9Y5K6 639 aa9.45□□□□□ -0.9
ITGB1-218ENST00000528877 C10orf71Q711Q0 1435 aa9.45□□□□□ -0.9
ITGB1-218ENST00000528877 GNAT3A8MTJ3 354 aa9.44□□□□□ -0.9
ITGB1-218ENST00000528877 U2SURPO15042 1029 aaKnown RBP9.44□□□□□ -0.9
ITGB1-218ENST00000528877 RPS6KA4O75676 772 aa9.44□□□□□ -0.9
ITGB1-218ENST00000528877 PRKAR2BP31323 418 aa9.44□□□□□ -0.9
ITGB1-218ENST00000528877 MSL1Q68DK7 614 aa9.44□□□□□ -0.9
ITGB1-218ENST00000528877 NUDCQ9Y266 331 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms