RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 RIC1Q4ADV7 1423 aa9.96□□□□□ -0.82
SSBP3-211ENST00000528787 COL24A1Q17RW2 1714 aa9.96□□□□□ -0.82
SSBP3-211ENST00000528787 MYH3P11055 1940 aa9.95□□□□□ -0.82
SSBP3-211ENST00000528787 NEURL1BA8MQ27 555 aa9.95□□□□□ -0.82
SSBP3-211ENST00000528787 GRM8O00222 908 aa9.95□□□□□ -0.82
SSBP3-211ENST00000528787 MMP10P09238 476 aa9.95□□□□□ -0.82
SSBP3-211ENST00000528787 UBTFL1P0CB47 393 aaPredicted RBP9.95□□□□□ -0.82
SSBP3-211ENST00000528787 TM4SF1P30408 202 aa9.95□□□□□ -0.82
SSBP3-211ENST00000528787 MVPQ14764 893 aaKnown RBP9.95□□□□□ -0.82
SSBP3-211ENST00000528787 ERICH6BQ5W0A0 696 aa9.95□□□□□ -0.82
SSBP3-211ENST00000528787 NLRP10Q86W26 655 aa9.95□□□□□ -0.82
SSBP3-211ENST00000528787 NLRP3Q96P20 1036 aa9.95□□□□□ -0.82
SSBP3-211ENST00000528787 TMX4Q9H1E5 349 aaPredicted RBP9.95□□□□□ -0.82
SSBP3-211ENST00000528787 F6X3S4 739 aa9.94□□□□□ -0.82
SSBP3-211ENST00000528787 SERPINB2P05120 415 aa9.94□□□□□ -0.82
SSBP3-211ENST00000528787 FKBP8Q14318 412 aa9.94□□□□□ -0.82
SSBP3-211ENST00000528787 NFIXQ14938 502 aa9.94□□□□□ -0.82
SSBP3-211ENST00000528787 HLFQ16534 295 aa9.94□□□□□ -0.82
SSBP3-211ENST00000528787 TBC1D9BQ66K14 1250 aa9.94□□□□□ -0.82
SSBP3-211ENST00000528787 BICDL1Q6ZP65 573 aa9.94□□□□□ -0.82
SSBP3-211ENST00000528787 SRP68Q9UHB9 627 aaKnown RBP9.94□□□□□ -0.82
SSBP3-211ENST00000528787 SUPT16HQ9Y5B9 1047 aaKnown RBP9.94□□□□□ -0.82
SSBP3-211ENST00000528787 UTYO14607 1347 aa9.93□□□□□ -0.82
SSBP3-211ENST00000528787 ATP5J2-PTCD1G3V325 749 aa9.93□□□□□ -0.82
SSBP3-211ENST00000528787 PDE8AO60658 829 aa9.93□□□□□ -0.82
SSBP3-211ENST00000528787 HMMRO75330 724 aa9.93□□□□□ -0.82
SSBP3-211ENST00000528787 GNAI2P04899 355 aa9.93□□□□□ -0.82
SSBP3-211ENST00000528787 GPTP24298 496 aa9.93□□□□□ -0.82
SSBP3-211ENST00000528787 CCDC152Q4G0S7 254 aa9.93□□□□□ -0.82
SSBP3-211ENST00000528787 SLC10A5Q5PT55 438 aa9.93□□□□□ -0.82
SSBP3-211ENST00000528787 TMC4Q7Z404 712 aa9.93□□□□□ -0.82
SSBP3-211ENST00000528787 CLUAP1Q96AJ1 413 aa9.93□□□□□ -0.82
SSBP3-211ENST00000528787 BRIP1Q9BX63 1249 aa9.93□□□□□ -0.82
SSBP3-211ENST00000528787 BCL2L12Q9HB09 334 aa9.93□□□□□ -0.82
SSBP3-211ENST00000528787 PPP1R1BQ9UD71 204 aaPredicted RBP9.93□□□□□ -0.82
SSBP3-211ENST00000528787 LAMB2P55268 1798 aa9.93□□□□□ -0.82
SSBP3-211ENST00000528787 NRXN2Q9P2S2 1712 aa9.93□□□□□ -0.82
SSBP3-211ENST00000528787 PSDA5PKW4 1024 aaPredicted RBP9.92□□□□□ -0.82
SSBP3-211ENST00000528787 H7C1W4 665 aa9.92□□□□□ -0.82
SSBP3-211ENST00000528787 POLRMTO00411 1230 aaKnown RBP9.92□□□□□ -0.82
SSBP3-211ENST00000528787 IRS4O14654 1257 aaPredicted RBP9.92□□□□□ -0.82
SSBP3-211ENST00000528787 GRIPAP1Q4V328 841 aa9.92□□□□□ -0.82
SSBP3-211ENST00000528787 PLA2G12BQ9BX93 195 aa9.92□□□□□ -0.82
SSBP3-211ENST00000528787 CD2APQ9Y5K6 639 aa9.92□□□□□ -0.82
SSBP3-211ENST00000528787 H0YIN7 160 aa9.91□□□□□ -0.82
SSBP3-211ENST00000528787 ZBTB7AO95365 584 aa9.91□□□□□ -0.82
SSBP3-211ENST00000528787 NTSR2O95665 410 aa9.91□□□□□ -0.82
SSBP3-211ENST00000528787 IGKV5-2P06315 115 aa9.91□□□□□ -0.82
SSBP3-211ENST00000528787 ALDH1B1P30837 517 aa9.91□□□□□ -0.82
SSBP3-211ENST00000528787 TGFB2P61812 414 aa9.91□□□□□ -0.82
SSBP3-211ENST00000528787 CWF19L2Q2TBE0 894 aaKnown RBP9.91□□□□□ -0.82
SSBP3-211ENST00000528787 SUSD4Q5VX71 490 aa9.91□□□□□ -0.82
SSBP3-211ENST00000528787 RPAP2Q8IXW5 612 aaPredicted RBP9.91□□□□□ -0.82
SSBP3-211ENST00000528787 TMEM57Q8N5G2 664 aa9.91□□□□□ -0.82
SSBP3-211ENST00000528787 RPGRQ92834 1020 aaKnown RBP9.91□□□□□ -0.82
SSBP3-211ENST00000528787 CDC5LQ99459 802 aaKnown RBP9.91□□□□□ -0.82
SSBP3-211ENST00000528787 UBN2Q6ZU65 1347 aa9.9□□□□□ -0.82
SSBP3-211ENST00000528787 CCDC57Q2TAC2 916 aa9.9□□□□□ -0.82
SSBP3-211ENST00000528787 HSP90AB4PQ58FF6 505 aa9.9□□□□□ -0.82
SSBP3-211ENST00000528787 SOGA3Q5TF21 947 aa9.9□□□□□ -0.82
SSBP3-211ENST00000528787 PRR5LQ6MZQ0 368 aa9.9□□□□□ -0.82
SSBP3-211ENST00000528787 DDX46Q7L014 1031 aaKnown RBP9.9□□□□□ -0.82
SSBP3-211ENST00000528787 UBE3BQ7Z3V4 1068 aa9.9□□□□□ -0.82
SSBP3-211ENST00000528787 AMIGO3Q86WK7 504 aa9.9□□□□□ -0.82
SSBP3-211ENST00000528787 RBM17Q96I25 401 aaKnown RBP9.9□□□□□ -0.82
SSBP3-211ENST00000528787 FBXO3Q9UK99 471 aa9.9□□□□□ -0.82
SSBP3-211ENST00000528787 KIF13BQ9NQT8 1826 aa9.89□□□□□ -0.83
SSBP3-211ENST00000528787 DCAF8L1A6NGE4 600 aa9.89□□□□□ -0.83
SSBP3-211ENST00000528787 ZBTB7BO15156 539 aaPredicted RBP9.89□□□□□ -0.83
SSBP3-211ENST00000528787 PLIN1O60240 522 aa9.89□□□□□ -0.83
SSBP3-211ENST00000528787 SF3B3Q15393 1217 aaKnown RBP9.89□□□□□ -0.83
SSBP3-211ENST00000528787 TAF7LQ5H9L4 462 aa9.89□□□□□ -0.83
SSBP3-211ENST00000528787 MSL1Q68DK7 614 aa9.89□□□□□ -0.83
SSBP3-211ENST00000528787 PANK1Q8TE04 598 aa9.89□□□□□ -0.83
SSBP3-211ENST00000528787 CNKSR1Q969H4 720 aa9.89□□□□□ -0.83
SSBP3-211ENST00000528787 FAM89AQ96GI7 184 aa9.89□□□□□ -0.83
SSBP3-211ENST00000528787 USP44Q9H0E7 712 aa9.89□□□□□ -0.83
SSBP3-211ENST00000528787 ATF5Q9Y2D1 282 aaPredicted RBP9.89□□□□□ -0.83
SSBP3-211ENST00000528787 COG6Q9Y2V7 657 aa9.89□□□□□ -0.83
SSBP3-211ENST00000528787 LRP5O75197 1615 aa9.89□□□□□ -0.83
SSBP3-211ENST00000528787 RTL9Q8NET4 1388 aa9.88□□□□□ -0.83
SSBP3-211ENST00000528787 ANKRD18BA2A2Z9 1011 aa9.88□□□□□ -0.83
SSBP3-211ENST00000528787 FAM177BA6PVY3 158 aa9.88□□□□□ -0.83
SSBP3-211ENST00000528787 NPR1P16066 1061 aa9.88□□□□□ -0.83
SSBP3-211ENST00000528787 IGHMBP2P38935 993 aaKnown RBP9.88□□□□□ -0.83
SSBP3-211ENST00000528787 CTSWP56202 376 aa9.88□□□□□ -0.83
SSBP3-211ENST00000528787 DDR1Q08345 913 aa9.88□□□□□ -0.83
SSBP3-211ENST00000528787 IFIT5Q13325 482 aaKnown RBP9.88□□□□□ -0.83
SSBP3-211ENST00000528787 CC2D2BQ6DHV5 1058 aa9.88□□□□□ -0.83
SSBP3-211ENST00000528787 STYK1Q6J9G0 422 aa9.88□□□□□ -0.83
SSBP3-211ENST00000528787 MASTLQ96GX5 879 aa9.88□□□□□ -0.83
SSBP3-211ENST00000528787 ZBTB47Q9UFB7 747 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-211ENST00000528787 C10orf71Q711Q0 1435 aa9.88□□□□□ -0.83
SSBP3-211ENST00000528787 KLRG2A4D1S0 409 aaPredicted RBP9.87□□□□□ -0.83
SSBP3-211ENST00000528787 BBOX1O75936 387 aa9.87□□□□□ -0.83
SSBP3-211ENST00000528787 MTX1Q13505 466 aa9.87□□□□□ -0.83
SSBP3-211ENST00000528787 CRY2Q49AN0 593 aa9.87□□□□□ -0.83
SSBP3-211ENST00000528787 ERFEQ4G0M1 354 aa9.87□□□□□ -0.83
SSBP3-211ENST00000528787 CRAMP1Q96RY5 1269 aa9.87□□□□□ -0.83
SSBP3-211ENST00000528787 MPHOSPH8Q99549 860 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms