RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	RBM8A	Q9Y5S9	174 aa	Known RBP	28.01	■■■□□ 2.07
GSDMD-208	ENST00000528475	CREB3L3	Q68CJ9	461 aa		28.01	■■■□□ 2.07
GSDMD-208	ENST00000528475	UBE2Q2	Q8WVN8	375 aa		28.01	■■■□□ 2.07
GSDMD-208	ENST00000528475	LARP1	Q6PKG0	1096 aa	Known RBP	28	■■■□□ 2.07
GSDMD-208	ENST00000528475	AXIN2	Q9Y2T1	843 aa		27.99	■■■□□ 2.07
GSDMD-208	ENST00000528475	IGKV5-2	P06315	115 aa		27.99	■■■□□ 2.07
GSDMD-208	ENST00000528475	ST3GAL1	Q11201	340 aa		27.99	■■■□□ 2.07
GSDMD-208	ENST00000528475	NMI	Q13287	307 aa	Predicted RBP	27.99	■■■□□ 2.07
GSDMD-208	ENST00000528475	PSMA5	P28066	241 aa		27.98	■■■□□ 2.07
GSDMD-208	ENST00000528475	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	27.98	■■■□□ 2.07
GSDMD-208	ENST00000528475	KIF1A	Q12756	1690 aa		27.98	■■■□□ 2.07
GSDMD-208	ENST00000528475	HSP90AA2P	Q14568	343 aa	Predicted RBP	27.98	■■■□□ 2.07
GSDMD-208	ENST00000528475	JCAD	Q9P266	1359 aa		27.98	■■■□□ 2.07
GSDMD-208	ENST00000528475	SCN11A	Q9UI33	1791 aa		27.97	■■■□□ 2.07
GSDMD-208	ENST00000528475	ME3	Q16798	604 aa		27.97	■■■□□ 2.07
GSDMD-208	ENST00000528475	FAM227B	Q96M60	508 aa		27.97	■■■□□ 2.07
GSDMD-208	ENST00000528475	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	27.97	■■■□□ 2.07
GSDMD-208	ENST00000528475	C5	P01031	1676 aa		27.97	■■■□□ 2.07
GSDMD-208	ENST00000528475	MED23	Q9ULK4	1368 aa		27.96	■■■□□ 2.07
GSDMD-208	ENST00000528475	ERBB3	P21860	1342 aa		27.96	■■■□□ 2.07
GSDMD-208	ENST00000528475	SLC27A2	O14975	620 aa		27.96	■■■□□ 2.07
GSDMD-208	ENST00000528475	ZNF790	Q6PG37	636 aa		27.96	■■■□□ 2.07
GSDMD-208	ENST00000528475	RIC3	Q7Z5B4	369 aa		27.96	■■■□□ 2.07
GSDMD-208	ENST00000528475	CCDC8	Q9H0W5	538 aa	Predicted RBP	27.96	■■■□□ 2.07
GSDMD-208	ENST00000528475	NEURL1B	A8MQ27	555 aa		27.95	■■■□□ 2.07
GSDMD-208	ENST00000528475	XPC	Q01831	940 aa	Predicted RBP	27.95	■■■□□ 2.07
GSDMD-208	ENST00000528475	ABCC6	O95255	1503 aa		27.95	■■■□□ 2.06
GSDMD-208	ENST00000528475	FIBP	O43427	364 aa		27.95	■■■□□ 2.06
GSDMD-208	ENST00000528475	NEXN	Q0ZGT2	675 aa		27.95	■■■□□ 2.06
GSDMD-208	ENST00000528475	AIMP1	Q12904	312 aa	Known RBP	27.95	■■■□□ 2.06
GSDMD-208	ENST00000528475	RNF20	Q5VTR2	975 aa		27.95	■■■□□ 2.06
GSDMD-208	ENST00000528475	RGPD5	Q99666	1765 aa		27.94	■■■□□ 2.06
GSDMD-208	ENST00000528475	ANKRD1	Q15327	319 aa		27.94	■■■□□ 2.06
GSDMD-208	ENST00000528475	PROSER2	Q86WR7	435 aa	Predicted RBP	27.94	■■■□□ 2.06
GSDMD-208	ENST00000528475	SLC52A2	Q9HAB3	445 aa		27.94	■■■□□ 2.06
GSDMD-208	ENST00000528475	KCNJ4	P48050	445 aa		27.93	■■■□□ 2.06
GSDMD-208	ENST00000528475	KRT28	Q7Z3Y7	464 aa		27.93	■■■□□ 2.06
GSDMD-208	ENST00000528475	FUCA2	Q9BTY2	467 aa		27.93	■■■□□ 2.06
GSDMD-208	ENST00000528475	TLR7	Q9NYK1	1049 aa	Known RBP	27.93	■■■□□ 2.06
GSDMD-208	ENST00000528475	TPCN1	Q9ULQ1	816 aa		27.93	■■■□□ 2.06
GSDMD-208	ENST00000528475	KDM6A	O15550	1401 aa	Predicted RBP	27.93	■■■□□ 2.06
GSDMD-208	ENST00000528475	DNM1	Q05193	864 aa	Known RBP	27.93	■■■□□ 2.06
GSDMD-208	ENST00000528475	GCKR	Q14397	625 aa		27.93	■■■□□ 2.06
GSDMD-208	ENST00000528475	TSGA10IP	Q3SY00	556 aa		27.93	■■■□□ 2.06
GSDMD-208	ENST00000528475	METTL22	Q9BUU2	404 aa	Predicted RBP	27.93	■■■□□ 2.06
GSDMD-208	ENST00000528475	PLEKHG2	Q9H7P9	1386 aa		27.92	■■■□□ 2.06
GSDMD-208	ENST00000528475	PTMA	P06454	111 aa	Known RBP	27.92	■■■□□ 2.06
GSDMD-208	ENST00000528475	FSD1	Q9BTV5	496 aa		27.92	■■■□□ 2.06
GSDMD-208	ENST00000528475	NPHP3	Q7Z494	1330 aa		27.92	■■■□□ 2.06
GSDMD-208	ENST00000528475	COL15A1	P39059	1388 aa		27.92	■■■□□ 2.06
GSDMD-208	ENST00000528475		A0A0D9SFI3	127 aa		27.91	■■■□□ 2.06
GSDMD-208	ENST00000528475	HMG20B	Q9P0W2	317 aa		27.91	■■■□□ 2.06
GSDMD-208	ENST00000528475	ALS2	Q96Q42	1657 aa		27.91	■■■□□ 2.06
GSDMD-208	ENST00000528475	BOLA2	Q9H3K6	86 aa		27.91	■■■□□ 2.06
GSDMD-208	ENST00000528475	LMOD2	Q6P5Q4	547 aa		27.9	■■■□□ 2.06
GSDMD-208	ENST00000528475	COPRS	Q9NQ92	184 aa		27.9	■■■□□ 2.06
GSDMD-208	ENST00000528475	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	27.9	■■■□□ 2.06
GSDMD-208	ENST00000528475	R3HCC1	Q9Y3T6	440 aa	Known RBP	27.9	■■■□□ 2.06
GSDMD-208	ENST00000528475	PDC	P20941	246 aa		27.9	■■■□□ 2.06
GSDMD-208	ENST00000528475	BLOC1S2	Q6QNY1	142 aa		27.9	■■■□□ 2.06
GSDMD-208	ENST00000528475	RFX7	Q2KHR2	1363 aa		27.9	■■■□□ 2.06
GSDMD-208	ENST00000528475	RPS6KB1	P23443	525 aa		27.89	■■■□□ 2.06
GSDMD-208	ENST00000528475	RAPGEF4	Q8WZA2	1011 aa		27.89	■■■□□ 2.06
GSDMD-208	ENST00000528475	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	27.89	■■■□□ 2.06
GSDMD-208	ENST00000528475	NECAB1	Q8N987	351 aa		27.88	■■■□□ 2.05
GSDMD-208	ENST00000528475	XAGE3	Q8WTP9	111 aa		27.88	■■■□□ 2.05
GSDMD-208	ENST00000528475	C1orf167	Q5SNV9	1468 aa		27.88	■■■□□ 2.05
GSDMD-208	ENST00000528475	HCLS1	P14317	486 aa	Predicted RBP	27.88	■■■□□ 2.05
GSDMD-208	ENST00000528475	PHKG2	P15735	406 aa		27.88	■■■□□ 2.05
GSDMD-208	ENST00000528475	SIL1	Q9H173	461 aa		27.88	■■■□□ 2.05
GSDMD-208	ENST00000528475	ELP1	O95163	1332 aa		27.87	■■■□□ 2.05
GSDMD-208	ENST00000528475	VPS37C	A5D8V6	355 aa	Predicted RBP	27.87	■■■□□ 2.05
GSDMD-208	ENST00000528475	KIAA2012	Q0VF49	1180 aa		27.87	■■■□□ 2.05
GSDMD-208	ENST00000528475	SLC39A6	Q13433	755 aa		27.87	■■■□□ 2.05
GSDMD-208	ENST00000528475	USPL1	Q5W0Q7	1092 aa		27.87	■■■□□ 2.05
GSDMD-208	ENST00000528475	LARP1B	Q659C4	914 aa	Known RBP	27.87	■■■□□ 2.05
GSDMD-208	ENST00000528475	LRP10	Q7Z4F1	713 aa		27.87	■■■□□ 2.05
GSDMD-208	ENST00000528475	USP25	Q9UHP3	1055 aa		27.87	■■■□□ 2.05
GSDMD-208	ENST00000528475	ATP5J	P18859	108 aa		27.87	■■■□□ 2.05
GSDMD-208	ENST00000528475	EPHA10	Q5JZY3	1008 aa		27.87	■■■□□ 2.05
GSDMD-208	ENST00000528475	COPS6	Q7L5N1	327 aa		27.87	■■■□□ 2.05
GSDMD-208	ENST00000528475	MYD88	Q99836	296 aa		27.86	■■■□□ 2.05
GSDMD-208	ENST00000528475	TAT	P17735	454 aa	Predicted RBP	27.85	■■■□□ 2.05
GSDMD-208	ENST00000528475	RFX5	P48382	616 aa	Predicted RBP	27.85	■■■□□ 2.05
GSDMD-208	ENST00000528475	DDX54	Q8TDD1	881 aa	Known RBP	27.85	■■■□□ 2.05
GSDMD-208	ENST00000528475	KDM4A	O75164	1064 aa		27.85	■■■□□ 2.05
GSDMD-208	ENST00000528475	ADCY5	O95622	1261 aa		27.85	■■■□□ 2.05
GSDMD-208	ENST00000528475	MYL6B	P14649	208 aa		27.85	■■■□□ 2.05
GSDMD-208	ENST00000528475	KRT85	P78386	507 aa		27.85	■■■□□ 2.05
GSDMD-208	ENST00000528475	TAF5L	O75529	589 aa		27.84	■■■□□ 2.05
GSDMD-208	ENST00000528475	RABL6	Q3YEC7	729 aa	Predicted RBP	27.84	■■■□□ 2.05
GSDMD-208	ENST00000528475	ANKRD13D	Q6ZTN6	518 aa		27.84	■■■□□ 2.05
GSDMD-208	ENST00000528475	KLHDC4	Q8TBB5	520 aa		27.84	■■■□□ 2.05
GSDMD-208	ENST00000528475	TOB2	Q14106	344 aa	Predicted RBP	27.83	■■■□□ 2.05
GSDMD-208	ENST00000528475	KRT32	Q14532	448 aa		27.83	■■■□□ 2.05
GSDMD-208	ENST00000528475	GIMAP6	Q6P9H5	292 aa		27.83	■■■□□ 2.05
GSDMD-208	ENST00000528475	ZNF589	Q86UQ0	364 aa	Predicted RBP	27.83	■■■□□ 2.05
GSDMD-208	ENST00000528475	NFATC2IP	Q8NCF5	419 aa		27.83	■■■□□ 2.05
GSDMD-208	ENST00000528475	C19orf44	Q9H6X5	657 aa		27.83	■■■□□ 2.05
GSDMD-208	ENST00000528475	SNRPA1	P09661	255 aa	Known RBP	27.82	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms