RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 DDX54Q8TDD1 881 aaKnown RBP7.84□□□□□ -1.15
CHKA-204ENST00000528235 THAP11Q96EK4 314 aa7.84□□□□□ -1.15
CHKA-204ENST00000528235 BCL11AQ9H165 835 aa7.84□□□□□ -1.15
CHKA-204ENST00000528235 SLC27A5Q9Y2P5 690 aa7.84□□□□□ -1.15
CHKA-204ENST00000528235 FAM187AA6NFU0 413 aa7.83□□□□□ -1.16
CHKA-204ENST00000528235 TNFRSF10AO00220 468 aa7.83□□□□□ -1.16
CHKA-204ENST00000528235 CD2BP2O95400 341 aaKnown RBP7.83□□□□□ -1.16
CHKA-204ENST00000528235 MAP2K5Q13163 448 aa7.83□□□□□ -1.16
CHKA-204ENST00000528235 COL23A1Q86Y22 540 aaPredicted RBP7.83□□□□□ -1.16
CHKA-204ENST00000528235 C16orf71Q8IYS4 520 aaPredicted RBP7.83□□□□□ -1.16
CHKA-204ENST00000528235 CCNL1Q9UK58 526 aaPredicted RBP7.83□□□□□ -1.16
CHKA-204ENST00000528235 WWC3Q9ULE0 1092 aa7.83□□□□□ -1.16
CHKA-204ENST00000528235 USP54Q70EL1 1684 aa7.83□□□□□ -1.16
CHKA-204ENST00000528235 IGSF1Q8N6C5 1336 aa7.82□□□□□ -1.16
CHKA-204ENST00000528235 CENPJQ9HC77 1338 aaPredicted RBP7.82□□□□□ -1.16
CHKA-204ENST00000528235 HMGB2P26583 209 aaKnown RBP7.82□□□□□ -1.16
CHKA-204ENST00000528235 Q3C1V9 767 aa7.82□□□□□ -1.16
CHKA-204ENST00000528235 UBR3Q6ZT12 1888 aa7.82□□□□□ -1.16
CHKA-204ENST00000528235 MON2Q7Z3U7 1717 aa7.82□□□□□ -1.16
CHKA-204ENST00000528235 KLRG1Q96E93 195 aa7.82□□□□□ -1.16
CHKA-204ENST00000528235 FCF1Q9Y324 198 aaKnown RBP7.82□□□□□ -1.16
CHKA-204ENST00000528235 ITGB4P16144 1822 aa7.82□□□□□ -1.16
CHKA-204ENST00000528235 NFAT5O94916 1531 aa7.82□□□□□ -1.16
CHKA-204ENST00000528235 TTC21BQ7Z4L5 1316 aa7.81□□□□□ -1.16
CHKA-204ENST00000528235 TTC21AQ8NDW8 1320 aa7.81□□□□□ -1.16
CHKA-204ENST00000528235 CCDC88AQ3V6T2 1871 aa7.81□□□□□ -1.16
CHKA-204ENST00000528235 BRICD5Q6PL45 260 aa7.81□□□□□ -1.16
CHKA-204ENST00000528235 FLAD1Q8NFF5 587 aa7.81□□□□□ -1.16
CHKA-204ENST00000528235 PKD1L3Q7Z443 1732 aa7.81□□□□□ -1.16
CHKA-204ENST00000528235 ARFGEF1Q9Y6D6 1849 aa7.8□□□□□ -1.16
CHKA-204ENST00000528235 IRF6O14896 467 aa7.8□□□□□ -1.16
CHKA-204ENST00000528235 ZBTB24O43167 697 aaPredicted RBP7.8□□□□□ -1.16
CHKA-204ENST00000528235 FOXC1Q12948 553 aa7.8□□□□□ -1.16
CHKA-204ENST00000528235 MSS51Q4VC12 460 aa7.8□□□□□ -1.16
CHKA-204ENST00000528235 FAM160A2Q8N612 972 aaPredicted RBP7.8□□□□□ -1.16
CHKA-204ENST00000528235 ANKRD24Q8TF21 1146 aa7.8□□□□□ -1.16
CHKA-204ENST00000528235 SBF1O95248 1867 aa7.8□□□□□ -1.16
CHKA-204ENST00000528235 ANKRD36BQ8N2N9 1353 aa7.8□□□□□ -1.16
CHKA-204ENST00000528235 USP47Q96K76 1375 aa7.8□□□□□ -1.16
CHKA-204ENST00000528235 KIF13BQ9NQT8 1826 aa7.8□□□□□ -1.16
CHKA-204ENST00000528235 HTRA3P83110 453 aa7.79□□□□□ -1.16
CHKA-204ENST00000528235 JMYQ8N9B5 988 aa7.79□□□□□ -1.16
CHKA-204ENST00000528235 KTN1Q86UP2 1357 aaKnown RBP7.79□□□□□ -1.16
CHKA-204ENST00000528235 TNRC6CQ9HCJ0 1690 aaKnown RBP7.79□□□□□ -1.16
CHKA-204ENST00000528235 BRCA1P38398 1863 aaKnown RBP7.79□□□□□ -1.16
CHKA-204ENST00000528235 EVC2Q86UK5 1308 aa7.78□□□□□ -1.16
CHKA-204ENST00000528235 CICQ96RK0 1608 aaPredicted RBP7.78□□□□□ -1.16
CHKA-204ENST00000528235 C4BP0C0L5 1744 aa7.78□□□□□ -1.16
CHKA-204ENST00000528235 KDM4AO75164 1064 aa7.78□□□□□ -1.16
CHKA-204ENST00000528235 CD46P15529 392 aa7.78□□□□□ -1.16
CHKA-204ENST00000528235 NBPF1Q3BBV0 1214 aa7.78□□□□□ -1.16
CHKA-204ENST00000528235 NMRK2Q9NPI5 230 aa7.78□□□□□ -1.16
CHKA-204ENST00000528235 RNF19BQ6ZMZ0 732 aa7.77□□□□□ -1.17
CHKA-204ENST00000528235 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.77□□□□□ -1.17
CHKA-204ENST00000528235 LTV1Q96GA3 475 aaPredicted RBP7.77□□□□□ -1.17
CHKA-204ENST00000528235 PKD2L1Q9P0L9 805 aa7.77□□□□□ -1.17
CHKA-204ENST00000528235 PCNTO95613 3336 aa7.77□□□□□ -1.17
CHKA-204ENST00000528235 KIAA1551Q9HCM1 1747 aa7.76□□□□□ -1.17
CHKA-204ENST00000528235 TOGARAM1Q9Y4F4 1720 aa7.76□□□□□ -1.17
CHKA-204ENST00000528235 USP46P62068 366 aa7.76□□□□□ -1.17
CHKA-204ENST00000528235 FSTL1Q12841 308 aa7.76□□□□□ -1.17
CHKA-204ENST00000528235 ARHGAP27Q6ZUM4 889 aa7.76□□□□□ -1.17
CHKA-204ENST00000528235 CYP4X1Q8N118 509 aa7.76□□□□□ -1.17
CHKA-204ENST00000528235 ZCRB1Q8TBF4 217 aaKnown RBP7.76□□□□□ -1.17
CHKA-204ENST00000528235 AK7Q96M32 723 aa7.76□□□□□ -1.17
CHKA-204ENST00000528235 PRDM9Q9NQV7 894 aa7.76□□□□□ -1.17
CHKA-204ENST00000528235 BCS1LQ9Y276 419 aa7.76□□□□□ -1.17
CHKA-204ENST00000528235 NSD2O96028 1365 aa7.75□□□□□ -1.17
CHKA-204ENST00000528235 MDM2Q00987 491 aaPredicted RBP7.75□□□□□ -1.17
CHKA-204ENST00000528235 KRI1Q8N9T8 703 aaKnown RBP7.75□□□□□ -1.17
CHKA-204ENST00000528235 NSD3Q9BZ95 1437 aa7.75□□□□□ -1.17
CHKA-204ENST00000528235 KDM2BQ8NHM5 1336 aa7.75□□□□□ -1.17
CHKA-204ENST00000528235 RAB3GAP2Q9H2M9 1393 aa7.74□□□□□ -1.17
CHKA-204ENST00000528235 HSPA1AP0DMV8 641 aaKnown RBP7.74□□□□□ -1.17
CHKA-204ENST00000528235 HSPA1BP0DMV9 641 aaKnown RBP7.74□□□□□ -1.17
CHKA-204ENST00000528235 CLCN1P35523 988 aa7.74□□□□□ -1.17
CHKA-204ENST00000528235 USB1Q9BQ65 265 aaKnown RBP7.74□□□□□ -1.17
CHKA-204ENST00000528235 USP31Q70CQ4 1352 aa7.73□□□□□ -1.17
CHKA-204ENST00000528235 PLEKHG2Q9H7P9 1386 aa7.73□□□□□ -1.17
CHKA-204ENST00000528235 MMP16P51512 607 aa7.73□□□□□ -1.17
CHKA-204ENST00000528235 NME9Q86XW9 330 aa7.73□□□□□ -1.17
CHKA-204ENST00000528235 IP6K1Q92551 441 aa7.73□□□□□ -1.17
CHKA-204ENST00000528235 CCDC102AQ96A19 550 aa7.73□□□□□ -1.17
CHKA-204ENST00000528235 ZNF775Q96BV0 537 aaPredicted RBP7.73□□□□□ -1.17
CHKA-204ENST00000528235 RRAGCQ9HB90 399 aa7.73□□□□□ -1.17
CHKA-204ENST00000528235 GPCPD1Q9NPB8 672 aa7.73□□□□□ -1.17
CHKA-204ENST00000528235 AAASQ9NRG9 546 aa7.73□□□□□ -1.17
CHKA-204ENST00000528235 TOR4AQ9NXH8 423 aa7.73□□□□□ -1.17
CHKA-204ENST00000528235 KCPQ6ZWJ8 1503 aa7.73□□□□□ -1.17
CHKA-204ENST00000528235 PALLDQ8WX93 1383 aa7.72□□□□□ -1.17
CHKA-204ENST00000528235 TGFB2P61812 414 aa7.72□□□□□ -1.17
CHKA-204ENST00000528235 C9orf131Q5VYM1 1079 aa7.72□□□□□ -1.17
CHKA-204ENST00000528235 MPRIPQ6WCQ1 1025 aa7.72□□□□□ -1.17
CHKA-204ENST00000528235 CRIPAKQ8N1N5 446 aa7.72□□□□□ -1.17
CHKA-204ENST00000528235 SMC1BQ8NDV3 1235 aa7.72□□□□□ -1.17
CHKA-204ENST00000528235 MAP2P11137 1827 aaKnown RBP7.72□□□□□ -1.17
CHKA-204ENST00000528235 A0A0G2JLW4 131 aa7.71□□□□□ -1.18
CHKA-204ENST00000528235 TTC24A2A3L6 582 aaPredicted RBP7.71□□□□□ -1.18
CHKA-204ENST00000528235 SSFA2P28290 1259 aa7.71□□□□□ -1.18
CHKA-204ENST00000528235 CTC1Q2NKJ3 1217 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms