RNA–Protein interactions for RNA: ENST00000527891.5

ATM-213, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-213ENST00000527891 LMOD3Q0VAK6 560 aa22.62■■□□□ 1.21
ATM-213ENST00000527891 EIF2S2P20042 333 aaKnown RBP22.61■■□□□ 1.21
ATM-213ENST00000527891 TMPOP42166 694 aaKnown RBP22.61■■□□□ 1.21
ATM-213ENST00000527891 PARP10Q53GL7 1025 aa22.61■■□□□ 1.21
ATM-213ENST00000527891 COL13A1Q5TAT6 717 aaPredicted RBP22.61■■□□□ 1.21
ATM-213ENST00000527891 LRP10Q7Z4F1 713 aa22.61■■□□□ 1.21
ATM-213ENST00000527891 PPP1R42Q7Z4L9 355 aa22.61■■□□□ 1.21
ATM-213ENST00000527891 HACL1Q9UJ83 578 aa22.61■■□□□ 1.21
ATM-213ENST00000527891 PDIA6Q15084 440 aa22.6■■□□□ 1.21
ATM-213ENST00000527891 JDP2Q8WYK2 163 aa22.6■■□□□ 1.21
ATM-213ENST00000527891 RBM17Q96I25 401 aaKnown RBP22.6■■□□□ 1.21
ATM-213ENST00000527891 HSPA1AP0DMV8 641 aaKnown RBP22.59■■□□□ 1.21
ATM-213ENST00000527891 HSPA1BP0DMV9 641 aaKnown RBP22.59■■□□□ 1.21
ATM-213ENST00000527891 GRIPAP1Q4V328 841 aa22.59■■□□□ 1.21
ATM-213ENST00000527891 EAPPQ56P03 285 aaPredicted RBP22.59■■□□□ 1.21
ATM-213ENST00000527891 CRAMP1Q96RY5 1269 aa22.59■■□□□ 1.21
ATM-213ENST00000527891 PASKQ96RG2 1323 aa22.58■■□□□ 1.21
ATM-213ENST00000527891 EPHX2P34913 555 aa22.58■■□□□ 1.21
ATM-213ENST00000527891 GPC2Q8N158 579 aa22.58■■□□□ 1.21
ATM-213ENST00000527891 RNF123Q5XPI4 1314 aa22.57■■□□□ 1.2
ATM-213ENST00000527891 MYBBP1AQ9BQG0 1328 aaKnown RBP22.57■■□□□ 1.2
ATM-213ENST00000527891 PPEF1O14829 653 aaPredicted RBP22.57■■□□□ 1.2
ATM-213ENST00000527891 PROSER3Q2NL68 480 aa22.57■■□□□ 1.2
ATM-213ENST00000527891 NLRP3Q96P20 1036 aa22.57■■□□□ 1.2
ATM-213ENST00000527891 MKRN1Q9UHC7 482 aaKnown RBP22.57■■□□□ 1.2
ATM-213ENST00000527891 ANXA1P04083 346 aa22.56■■□□□ 1.2
ATM-213ENST00000527891 C3orf67Q6ZVT6 689 aa22.56■■□□□ 1.2
ATM-213ENST00000527891 PNMA8AQ86V59 439 aaPredicted RBP22.56■■□□□ 1.2
ATM-213ENST00000527891 UTP14AQ9BVJ6 771 aaKnown RBP22.56■■□□□ 1.2
ATM-213ENST00000527891 EIF6P56537 245 aaKnown RBP22.55■■□□□ 1.2
ATM-213ENST00000527891 CLEC11AQ9Y240 323 aa22.55■■□□□ 1.2
ATM-213ENST00000527891 COL4A5P29400 1685 aa22.55■■□□□ 1.2
ATM-213ENST00000527891 ADAMTSL1Q8N6G6 1762 aa22.54■■□□□ 1.2
ATM-213ENST00000527891 TCERG1O14776 1098 aaKnown RBP22.54■■□□□ 1.2
ATM-213ENST00000527891 ITGBL1O95965 494 aaPredicted RBP22.54■■□□□ 1.2
ATM-213ENST00000527891 DDX10Q13206 875 aaKnown RBP22.54■■□□□ 1.2
ATM-213ENST00000527891 HSP90AB3PQ58FF7 597 aa22.54■■□□□ 1.2
ATM-213ENST00000527891 CCDC146Q8IYE0 955 aa22.54■■□□□ 1.2
ATM-213ENST00000527891 LARGE2Q8N3Y3 721 aa22.54■■□□□ 1.2
ATM-213ENST00000527891 CNTNAP1P78357 1384 aa22.53■■□□□ 1.2
ATM-213ENST00000527891 NEUROD2Q15784 382 aa22.53■■□□□ 1.2
ATM-213ENST00000527891 SLC10A5Q5PT55 438 aa22.53■■□□□ 1.2
ATM-213ENST00000527891 COPS6Q7L5N1 327 aa22.53■■□□□ 1.2
ATM-213ENST00000527891 SLC51AQ86UW1 340 aa22.53■■□□□ 1.2
ATM-213ENST00000527891 NECTIN2Q92692 538 aa22.53■■□□□ 1.2
ATM-213ENST00000527891 TMX4Q9H1E5 349 aaPredicted RBP22.53■■□□□ 1.2
ATM-213ENST00000527891 AIMP1Q12904 312 aaKnown RBP22.52■■□□□ 1.2
ATM-213ENST00000527891 TNS4Q8IZW8 715 aa22.52■■□□□ 1.2
ATM-213ENST00000527891 GJA3Q9Y6H8 435 aa22.52■■□□□ 1.2
ATM-213ENST00000527891 TMEM88BA6NKF7 163 aa22.51■■□□□ 1.19
ATM-213ENST00000527891 WDR43Q15061 677 aaKnown RBP eCLIP22.51■■□□□ 1.19
ATM-213ENST00000527891 XAGE3Q8WTP9 111 aa22.51■■□□□ 1.19
ATM-213ENST00000527891 RUNDC1Q96C34 613 aa22.51■■□□□ 1.19
ATM-213ENST00000527891 DDX21Q9NR30 783 aaKnown RBP eCLIP22.51■■□□□ 1.19
ATM-213ENST00000527891 CHL1O00533 1208 aa22.5■■□□□ 1.19
ATM-213ENST00000527891 LMOD1P29536 600 aaPredicted RBP22.5■■□□□ 1.19
ATM-213ENST00000527891 NLRP10Q86W26 655 aa22.5■■□□□ 1.19
ATM-213ENST00000527891 ATP6V0A2Q9Y487 856 aa22.5■■□□□ 1.19
ATM-213ENST00000527891 ABCC4O15439 1325 aa22.5■■□□□ 1.19
ATM-213ENST00000527891 ANKRD36CQ5JPF3 1778 aa22.49■■□□□ 1.19
ATM-213ENST00000527891 KRT24Q2M2I5 525 aa22.49■■□□□ 1.19
ATM-213ENST00000527891 MAP1SQ66K74 1059 aaPredicted RBP22.49■■□□□ 1.19
ATM-213ENST00000527891 NIM1KQ8IY84 436 aa22.49■■□□□ 1.19
ATM-213ENST00000527891 CNTROBQ8N137 903 aa22.49■■□□□ 1.19
ATM-213ENST00000527891 TRIM35Q9UPQ4 493 aa22.49■■□□□ 1.19
ATM-213ENST00000527891 LAS1LQ9Y4W2 734 aaKnown RBP22.49■■□□□ 1.19
ATM-213ENST00000527891 PPIP5K2O43314 1243 aa22.48■■□□□ 1.19
ATM-213ENST00000527891 TCIRG1Q13488 830 aa22.48■■□□□ 1.19
ATM-213ENST00000527891 VPS33BQ9H267 617 aa22.48■■□□□ 1.19
ATM-213ENST00000527891 SCNN1DP51172 638 aa22.47■■□□□ 1.19
ATM-213ENST00000527891 TRMT112Q9UI30 125 aaKnown RBP22.47■■□□□ 1.19
ATM-213ENST00000527891 LTBP1Q14766 1721 aa22.46■■□□□ 1.19
ATM-213ENST00000527891 BBOX1O75936 387 aa22.46■■□□□ 1.19
ATM-213ENST00000527891 HCLS1P14317 486 aaPredicted RBP22.46■■□□□ 1.19
ATM-213ENST00000527891 AOC3Q16853 763 aa22.46■■□□□ 1.19
ATM-213ENST00000527891 SUPT20HQ8NEM7 779 aa22.46■■□□□ 1.19
ATM-213ENST00000527891 CHPF2Q9P2E5 772 aa22.46■■□□□ 1.19
ATM-213ENST00000527891 SH3TC1Q8TE82 1336 aa22.46■■□□□ 1.19
ATM-213ENST00000527891 HOXB7P09629 217 aa22.45■■□□□ 1.18
ATM-213ENST00000527891 HDGFL1Q5TGJ6 251 aa22.45■■□□□ 1.18
ATM-213ENST00000527891 RTFDC1Q9BY42 306 aaPredicted RBP22.45■■□□□ 1.18
ATM-213ENST00000527891 ADAMTS8Q9UP79 889 aa22.45■■□□□ 1.18
ATM-213ENST00000527891 EPS15P42566 896 aa22.44■■□□□ 1.18
ATM-213ENST00000527891 VEGFBP49765 207 aa22.44■■□□□ 1.18
ATM-213ENST00000527891 DDX46Q7L014 1031 aaKnown RBP22.44■■□□□ 1.18
ATM-213ENST00000527891 SP8Q8IXZ3 490 aa22.44■■□□□ 1.18
ATM-213ENST00000527891 LAMB2P55268 1798 aa22.43■■□□□ 1.18
ATM-213ENST00000527891 GRAPQ13588 217 aa22.43■■□□□ 1.18
ATM-213ENST00000527891 DPP8Q6V1X1 898 aaPredicted RBP22.43■■□□□ 1.18
ATM-213ENST00000527891 USP50Q70EL3 339 aaPredicted RBP22.43■■□□□ 1.18
ATM-213ENST00000527891 GRAPLQ8TC17 118 aaPredicted RBP22.43■■□□□ 1.18
ATM-213ENST00000527891 RASSF10A6NK89 507 aa22.42■■□□□ 1.18
ATM-213ENST00000527891 MPNDQ8N594 471 aa22.42■■□□□ 1.18
ATM-213ENST00000527891 PLBD2Q8NHP8 589 aa22.42■■□□□ 1.18
ATM-213ENST00000527891 CFAP44Q96MT7 982 aa22.42■■□□□ 1.18
ATM-213ENST00000527891 DBF4Q9UBU7 674 aaPredicted RBP22.42■■□□□ 1.18
ATM-213ENST00000527891 ZNRF3Q9ULT6 936 aa22.42■■□□□ 1.18
ATM-213ENST00000527891 CAPN15O75808 1086 aa22.41■■□□□ 1.18
ATM-213ENST00000527891 FOXN1O15353 648 aa22.4■■□□□ 1.18
ATM-213ENST00000527891 CXCL9Q07325 125 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms