RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 ZNF521Q96K83 1311 aa11.52□□□□□ -0.57
CCDC90B-208ENST00000527025 ARFGEF1Q9Y6D6 1849 aa11.51□□□□□ -0.57
CCDC90B-208ENST00000527025 TCERG1O14776 1098 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-208ENST00000527025 HOXB7P09629 217 aa11.51□□□□□ -0.57
CCDC90B-208ENST00000527025 CALD1Q05682 793 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-208ENST00000527025 GIGYF2Q6Y7W6 1299 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-208ENST00000527025 C2CD5Q86YS7 1000 aa11.51□□□□□ -0.57
CCDC90B-208ENST00000527025 BRIP1Q9BX63 1249 aa11.51□□□□□ -0.57
CCDC90B-208ENST00000527025 PHAXQ9H814 394 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-208ENST00000527025 TNRC6CQ9HCJ0 1690 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-208ENST00000527025 ATP10DQ9P241 1426 aa11.51□□□□□ -0.57
CCDC90B-208ENST00000527025 GRIN3BO60391 1043 aa11.5□□□□□ -0.57
CCDC90B-208ENST00000527025 KIF6Q6ZMV9 814 aa11.5□□□□□ -0.57
CCDC90B-208ENST00000527025 NBPF5PQ86XG9 351 aaPredicted RBP11.5□□□□□ -0.57
CCDC90B-208ENST00000527025 NUTM1Q86Y26 1132 aa11.5□□□□□ -0.57
CCDC90B-208ENST00000527025 WDR63Q8IWG1 891 aa11.5□□□□□ -0.57
CCDC90B-208ENST00000527025 SYNE4Q8N205 404 aa11.5□□□□□ -0.57
CCDC90B-208ENST00000527025 CNBD1Q8NA66 436 aa11.5□□□□□ -0.57
CCDC90B-208ENST00000527025 PIM2Q9P1W9 311 aa11.5□□□□□ -0.57
CCDC90B-208ENST00000527025 ZNF652Q9Y2D9 606 aa11.5□□□□□ -0.57
CCDC90B-208ENST00000527025 IL16Q14005 1332 aa11.5□□□□□ -0.57
CCDC90B-208ENST00000527025 FANCIQ9NVI1 1328 aa11.5□□□□□ -0.57
CCDC90B-208ENST00000527025 ANKRD36CQ5JPF3 1778 aa11.49□□□□□ -0.57
CCDC90B-208ENST00000527025 SLX4Q8IY92 1834 aa11.49□□□□□ -0.57
CCDC90B-208ENST00000527025 KLRG2A4D1S0 409 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-208ENST00000527025 PRELPP51888 382 aa11.49□□□□□ -0.57
CCDC90B-208ENST00000527025 ERFEQ4G0M1 354 aa11.49□□□□□ -0.57
CCDC90B-208ENST00000527025 C3orf67Q6ZVT6 689 aa11.49□□□□□ -0.57
CCDC90B-208ENST00000527025 MS4A3Q96HJ5 214 aa11.49□□□□□ -0.57
CCDC90B-208ENST00000527025 DBF4Q9UBU7 674 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-208ENST00000527025 ABCC12Q96J65 1359 aa11.49□□□□□ -0.57
CCDC90B-208ENST00000527025 H0YIN7 160 aa11.48□□□□□ -0.57
CCDC90B-208ENST00000527025 VAMP4O75379 141 aa11.48□□□□□ -0.57
CCDC90B-208ENST00000527025 NTSR2O95665 410 aa11.48□□□□□ -0.57
CCDC90B-208ENST00000527025 SRGNP10124 158 aa11.48□□□□□ -0.57
CCDC90B-208ENST00000527025 EXOSC9Q06265 439 aaKnown RBP11.48□□□□□ -0.57
CCDC90B-208ENST00000527025 DALRD3Q5D0E6 543 aaKnown RBP11.48□□□□□ -0.57
CCDC90B-208ENST00000527025 TPTE2Q6XPS3 522 aa11.48□□□□□ -0.57
CCDC90B-208ENST00000527025 G2E3Q7L622 706 aa11.48□□□□□ -0.57
CCDC90B-208ENST00000527025 SLC51AQ86UW1 340 aa11.48□□□□□ -0.57
CCDC90B-208ENST00000527025 ARFGEF2Q9Y6D5 1785 aa11.48□□□□□ -0.57
CCDC90B-208ENST00000527025 CACNA1SQ13698 1873 aa11.48□□□□□ -0.57
CCDC90B-208ENST00000527025 PDE6BP35913 854 aa11.47□□□□□ -0.57
CCDC90B-208ENST00000527025 TCIRG1Q13488 830 aa11.47□□□□□ -0.57
CCDC90B-208ENST00000527025 TWISTNBQ3B726 338 aaPredicted RBP11.47□□□□□ -0.57
CCDC90B-208ENST00000527025 ANKRD13DQ6ZTN6 518 aa11.47□□□□□ -0.57
CCDC90B-208ENST00000527025 ARHGAP27Q6ZUM4 889 aa11.47□□□□□ -0.57
CCDC90B-208ENST00000527025 NLRP10Q86W26 655 aa11.47□□□□□ -0.57
CCDC90B-208ENST00000527025 PLBD2Q8NHP8 589 aa11.47□□□□□ -0.57
CCDC90B-208ENST00000527025 HYPKQ9NX55 129 aa11.47□□□□□ -0.57
CCDC90B-208ENST00000527025 SBF1O95248 1867 aa11.46□□□□□ -0.57
CCDC90B-208ENST00000527025 ATP5J2-PTCD1G3V325 749 aa11.46□□□□□ -0.57
CCDC90B-208ENST00000527025 OLFM4Q6UX06 510 aa11.46□□□□□ -0.57
CCDC90B-208ENST00000527025 TTLL6Q8N841 843 aa11.46□□□□□ -0.57
CCDC90B-208ENST00000527025 ZNF784Q8NCA9 323 aaPredicted RBP11.46□□□□□ -0.57
CCDC90B-208ENST00000527025 ZNF622Q969S3 477 aaKnown RBP eCLIP11.46□□□□□ -0.57
CCDC90B-208ENST00000527025 CDCA7LQ96GN5 454 aa11.46□□□□□ -0.57
CCDC90B-208ENST00000527025 ISCA1Q9BUE6 129 aa11.46□□□□□ -0.57
CCDC90B-208ENST00000527025 ST5P78524 1137 aa11.45□□□□□ -0.58
CCDC90B-208ENST00000527025 C7orf43Q8WVR3 580 aa11.45□□□□□ -0.58
CCDC90B-208ENST00000527025 LAMB2P55268 1798 aa11.45□□□□□ -0.58
CCDC90B-208ENST00000527025 TAF1P21675 1872 aa11.44□□□□□ -0.58
CCDC90B-208ENST00000527025 ADCY9O60503 1353 aa11.44□□□□□ -0.58
CCDC90B-208ENST00000527025 COL4A1P02462 1669 aa11.44□□□□□ -0.58
CCDC90B-208ENST00000527025 C21orf2O43822 256 aa11.44□□□□□ -0.58
CCDC90B-208ENST00000527025 CRY2Q49AN0 593 aa11.44□□□□□ -0.58
CCDC90B-208ENST00000527025 SLC10A5Q5PT55 438 aa11.44□□□□□ -0.58
CCDC90B-208ENST00000527025 CCDC30Q5VVM6 783 aa11.44□□□□□ -0.58
CCDC90B-208ENST00000527025 ASTLQ6HA08 431 aaPredicted RBP11.44□□□□□ -0.58
CCDC90B-208ENST00000527025 STYK1Q6J9G0 422 aa11.44□□□□□ -0.58
CCDC90B-208ENST00000527025 CCDC88AQ3V6T2 1871 aa11.44□□□□□ -0.58
CCDC90B-208ENST00000527025 DDX60Q8IY21 1712 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-208ENST00000527025 IBTKQ9P2D0 1353 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-208ENST00000527025 FER1L6Q2WGJ9 1857 aa11.43□□□□□ -0.58
CCDC90B-208ENST00000527025 NFKBIEO00221 500 aa11.43□□□□□ -0.58
CCDC90B-208ENST00000527025 NPHP1O15259 732 aa11.43□□□□□ -0.58
CCDC90B-208ENST00000527025 ATMINO43313 823 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-208ENST00000527025 HCLS1P14317 486 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-208ENST00000527025 RASSF7Q02833 373 aa11.43□□□□□ -0.58
CCDC90B-208ENST00000527025 GOLGA2Q08379 1002 aa11.43□□□□□ -0.58
CCDC90B-208ENST00000527025 PARP10Q53GL7 1025 aa11.43□□□□□ -0.58
CCDC90B-208ENST00000527025 PRPF40BQ6NWY9 871 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-208ENST00000527025 JARID2Q92833 1246 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-208ENST00000527025 MASTLQ96GX5 879 aa11.43□□□□□ -0.58
CCDC90B-208ENST00000527025 UTP14AQ9BVJ6 771 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-208ENST00000527025 NYXQ9GZU5 481 aa11.43□□□□□ -0.58
CCDC90B-208ENST00000527025 NPR1P16066 1061 aa11.42□□□□□ -0.58
CCDC90B-208ENST00000527025 GTF2E1P29083 439 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-208ENST00000527025 SLFN5Q08AF3 891 aa11.42□□□□□ -0.58
CCDC90B-208ENST00000527025 TRIM28Q13263 835 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-208ENST00000527025 PPP1R42Q7Z4L9 355 aa11.42□□□□□ -0.58
CCDC90B-208ENST00000527025 TRMT2AQ8IZ69 625 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-208ENST00000527025 FAM89AQ96GI7 184 aa11.42□□□□□ -0.58
CCDC90B-208ENST00000527025 PI4KAP2A4QPH2 592 aa11.41□□□□□ -0.58
CCDC90B-208ENST00000527025 IGKV5-2P06315 115 aa11.41□□□□□ -0.58
CCDC90B-208ENST00000527025 POTEJP0CG39 1038 aa11.41□□□□□ -0.58
CCDC90B-208ENST00000527025 HOXA10P31260 410 aaPredicted RBP11.41□□□□□ -0.58
CCDC90B-208ENST00000527025 HSP90AB3PQ58FF7 597 aa11.41□□□□□ -0.58
CCDC90B-208ENST00000527025 RTL5Q5HYW3 569 aaPredicted RBP11.41□□□□□ -0.58
CCDC90B-208ENST00000527025 C9orf131Q5VYM1 1079 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms