RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 SLX4Q8IY92 1834 aa23.84■■□□□ 1.41
TSPAN4-216ENST00000526055 KDM2BQ8NHM5 1336 aa23.84■■□□□ 1.41
TSPAN4-216ENST00000526055 HOXA10P31260 410 aaPredicted RBP23.83■■□□□ 1.41
TSPAN4-216ENST00000526055 CCDC93Q567U6 631 aa23.83■■□□□ 1.41
TSPAN4-216ENST00000526055 CCDC30Q5VVM6 783 aa23.83■■□□□ 1.41
TSPAN4-216ENST00000526055 NLRP10Q86W26 655 aa23.83■■□□□ 1.41
TSPAN4-216ENST00000526055 C8orf58Q8NAV2 365 aa23.83■■□□□ 1.41
TSPAN4-216ENST00000526055 TAOK3Q9H2K8 898 aa23.83■■□□□ 1.41
TSPAN4-216ENST00000526055 WDR63Q8IWG1 891 aa23.82■■□□□ 1.4
TSPAN4-216ENST00000526055 ZNF219Q9P2Y4 722 aaPredicted RBP23.82■■□□□ 1.4
TSPAN4-216ENST00000526055 FER1L6Q2WGJ9 1857 aa23.81■■□□□ 1.4
TSPAN4-216ENST00000526055 ELL2O00472 640 aaPredicted RBP23.81■■□□□ 1.4
TSPAN4-216ENST00000526055 KIF3CO14782 793 aa23.81■■□□□ 1.4
TSPAN4-216ENST00000526055 RPGRQ92834 1020 aaKnown RBP23.81■■□□□ 1.4
TSPAN4-216ENST00000526055 NLRP3Q96P20 1036 aa23.81■■□□□ 1.4
TSPAN4-216ENST00000526055 ANKRD36CQ5JPF3 1778 aa23.8■■□□□ 1.4
TSPAN4-216ENST00000526055 PRELPP51888 382 aa23.8■■□□□ 1.4
TSPAN4-216ENST00000526055 RTKN2Q8IZC4 609 aa23.8■■□□□ 1.4
TSPAN4-216ENST00000526055 RBM17Q96I25 401 aaKnown RBP23.8■■□□□ 1.4
TSPAN4-216ENST00000526055 CRAMP1Q96RY5 1269 aa23.8■■□□□ 1.4
TSPAN4-216ENST00000526055 TNRC6CQ9HCJ0 1690 aaKnown RBP23.79■■□□□ 1.4
TSPAN4-216ENST00000526055 GOLGA2Q08379 1002 aa23.79■■□□□ 1.4
TSPAN4-216ENST00000526055 TRIM28Q13263 835 aaKnown RBP23.79■■□□□ 1.4
TSPAN4-216ENST00000526055 GRIPAP1Q4V328 841 aa23.79■■□□□ 1.4
TSPAN4-216ENST00000526055 CC2D2BQ6DHV5 1058 aa23.79■■□□□ 1.4
TSPAN4-216ENST00000526055 ISCA1Q9BUE6 129 aa23.79■■□□□ 1.4
TSPAN4-216ENST00000526055 FAM9BQ8IZU0 186 aa23.78■■□□□ 1.4
TSPAN4-216ENST00000526055 TSR2Q969E8 191 aaKnown RBP23.78■■□□□ 1.4
TSPAN4-216ENST00000526055 TRMT112Q9UI30 125 aaKnown RBP23.78■■□□□ 1.4
TSPAN4-216ENST00000526055 SH3TC1Q8TE82 1336 aa23.78■■□□□ 1.4
TSPAN4-216ENST00000526055 TSPYL6Q8N831 410 aa23.77■■□□□ 1.4
TSPAN4-216ENST00000526055 GLTPD2A6NH11 291 aa23.76■■□□□ 1.39
TSPAN4-216ENST00000526055 DDX58O95786 925 aaKnown RBP23.76■■□□□ 1.39
TSPAN4-216ENST00000526055 FKBP4Q02790 459 aaKnown RBP eCLIP23.76■■□□□ 1.392e-6■■■■■ 27.9
TSPAN4-216ENST00000526055 CACNA1SQ13698 1873 aa23.76■■□□□ 1.39
TSPAN4-216ENST00000526055 TWISTNBQ3B726 338 aaPredicted RBP23.75■■□□□ 1.39
TSPAN4-216ENST00000526055 RIC3Q7Z5B4 369 aa23.75■■□□□ 1.39
TSPAN4-216ENST00000526055 STK31Q9BXU1 1019 aa23.75■■□□□ 1.39
TSPAN4-216ENST00000526055 PHAXQ9H814 394 aaKnown RBP23.75■■□□□ 1.39
TSPAN4-216ENST00000526055 NMRK2Q9NPI5 230 aa23.75■■□□□ 1.39
TSPAN4-216ENST00000526055 DPY19L2Q6NUT2 758 aa23.74■■□□□ 1.39
TSPAN4-216ENST00000526055 DICER1Q9UPY3 1922 aaKnown RBP23.73■■□□□ 1.39
TSPAN4-216ENST00000526055 TOMM70O94826 608 aa23.73■■□□□ 1.39
TSPAN4-216ENST00000526055 C3orf67Q6ZVT6 689 aa23.73■■□□□ 1.39
TSPAN4-216ENST00000526055 PSMD1Q99460 953 aa23.73■■□□□ 1.39
TSPAN4-216ENST00000526055 FANCIQ9NVI1 1328 aa23.73■■□□□ 1.39
TSPAN4-216ENST00000526055 CCDC88AQ3V6T2 1871 aa23.73■■□□□ 1.39
TSPAN4-216ENST00000526055 TIAM2Q8IVF5 1701 aa23.71■■□□□ 1.39
TSPAN4-216ENST00000526055 SNED1Q8TER0 1413 aa23.71■■□□□ 1.39
TSPAN4-216ENST00000526055 ATP5J2-PTCD1G3V325 749 aa23.71■■□□□ 1.39
TSPAN4-216ENST00000526055 HSP90B1P14625 803 aaKnown RBP23.71■■□□□ 1.39
TSPAN4-216ENST00000526055 SALL2Q9Y467 1007 aaPredicted RBP23.71■■□□□ 1.39
TSPAN4-216ENST00000526055 PPEF1O14829 653 aaPredicted RBP23.7■■□□□ 1.38
TSPAN4-216ENST00000526055 HCLS1P14317 486 aaPredicted RBP23.7■■□□□ 1.38
TSPAN4-216ENST00000526055 C16orf71Q8IYS4 520 aaPredicted RBP23.7■■□□□ 1.38
TSPAN4-216ENST00000526055 TMX4Q9H1E5 349 aaPredicted RBP23.7■■□□□ 1.38
TSPAN4-216ENST00000526055 MYH16Q9H6N6 1097 aa23.7■■□□□ 1.38
TSPAN4-216ENST00000526055 BBOX1O75936 387 aa23.69■■□□□ 1.38
TSPAN4-216ENST00000526055 CCDC191Q8NCU4 936 aa23.69■■□□□ 1.38
TSPAN4-216ENST00000526055 RBM46Q8TBY0 533 aaKnown RBP23.69■■□□□ 1.38
TSPAN4-216ENST00000526055 METTL22Q9BUU2 404 aaPredicted RBP23.69■■□□□ 1.38
TSPAN4-216ENST00000526055 RRAGCQ9HB90 399 aa23.69■■□□□ 1.38
TSPAN4-216ENST00000526055 ABCC4O15439 1325 aa23.68■■□□□ 1.38
TSPAN4-216ENST00000526055 VEGFAP15692 232 aaPredicted RBP23.68■■□□□ 1.38
TSPAN4-216ENST00000526055 OLFM4Q6UX06 510 aa23.68■■□□□ 1.38
TSPAN4-216ENST00000526055 KSR2Q6VAB6 950 aa23.68■■□□□ 1.38
TSPAN4-216ENST00000526055 DDX46Q7L014 1031 aaKnown RBP23.68■■□□□ 1.38
TSPAN4-216ENST00000526055 SYNE4Q8N205 404 aa23.68■■□□□ 1.38
TSPAN4-216ENST00000526055 ZBTB38Q8NAP3 1195 aaPredicted RBP23.68■■□□□ 1.38
TSPAN4-216ENST00000526055 SF3B3Q15393 1217 aaKnown RBP23.67■■□□□ 1.38
TSPAN4-216ENST00000526055 TMC4Q7Z404 712 aa23.67■■□□□ 1.38
TSPAN4-216ENST00000526055 FAM89AQ96GI7 184 aa23.67■■□□□ 1.38
TSPAN4-216ENST00000526055 ZNF277Q9NRM2 450 aaPredicted RBP23.67■■□□□ 1.38
TSPAN4-216ENST00000526055 ATP6V0A2Q9Y487 856 aa23.67■■□□□ 1.38
TSPAN4-216ENST00000526055 IARSP41252 1262 aaKnown RBP23.66■■□□□ 1.38
TSPAN4-216ENST00000526055 GRAPQ13588 217 aa23.66■■□□□ 1.38
TSPAN4-216ENST00000526055 GRAPLQ8TC17 118 aaPredicted RBP23.66■■□□□ 1.38
TSPAN4-216ENST00000526055 MYD88Q99836 296 aa23.66■■□□□ 1.38
TSPAN4-216ENST00000526055 CCER2I3L3R5 266 aa23.65■■□□□ 1.38
TSPAN4-216ENST00000526055 VAMP4O75379 141 aa23.65■■□□□ 1.38
TSPAN4-216ENST00000526055 SLC4A2P04920 1241 aa23.65■■□□□ 1.38
TSPAN4-216ENST00000526055 VPS33BQ9H267 617 aa23.65■■□□□ 1.38
TSPAN4-216ENST00000526055 CWC25Q9NXE8 425 aaPredicted RBP23.65■■□□□ 1.38
TSPAN4-216ENST00000526055 MAP3K2Q9Y2U5 619 aa23.65■■□□□ 1.38
TSPAN4-216ENST00000526055 ZNF521Q96K83 1311 aa23.64■■□□□ 1.38
TSPAN4-216ENST00000526055 PI4KAP2A4QPH2 592 aa23.64■■□□□ 1.37
TSPAN4-216ENST00000526055 IRS4O14654 1257 aaPredicted RBP23.64■■□□□ 1.37
TSPAN4-216ENST00000526055 PCCAP05165 728 aaPredicted RBP23.64■■□□□ 1.37
TSPAN4-216ENST00000526055 HSPA6P17066 643 aa23.64■■□□□ 1.37
TSPAN4-216ENST00000526055 FSTL1Q12841 308 aa23.64■■□□□ 1.37
TSPAN4-216ENST00000526055 SP8Q8IXZ3 490 aa23.64■■□□□ 1.37
TSPAN4-216ENST00000526055 PI4KAP1Q8N8J0 262 aa23.64■■□□□ 1.37
TSPAN4-216ENST00000526055 EXOSC9Q06265 439 aaKnown RBP23.63■■□□□ 1.37
TSPAN4-216ENST00000526055 NEXNQ0ZGT2 675 aa23.63■■□□□ 1.37
TSPAN4-216ENST00000526055 WDR90Q96KV7 1748 aa23.63■■□□□ 1.37
TSPAN4-216ENST00000526055 LAMB2P55268 1798 aa23.63■■□□□ 1.37
TSPAN4-216ENST00000526055 CACNA1FO60840 1977 aa23.62■■□□□ 1.37
TSPAN4-216ENST00000526055 SUPT20HQ8NEM7 779 aa23.62■■□□□ 1.37
TSPAN4-216ENST00000526055 JDP2Q8WYK2 163 aa23.62■■□□□ 1.37
TSPAN4-216ENST00000526055 SPINK5Q9NQ38 1064 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms