RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 LMOD1P29536 600 aaPredicted RBP16.75■□□□□ 0.27
CCDC90B-205ENST00000525916 EPS15P42566 896 aa16.75■□□□□ 0.27
CCDC90B-205ENST00000525916 SCNN1DP51172 638 aa16.75■□□□□ 0.27
CCDC90B-205ENST00000525916 EIF6P56537 245 aaKnown RBP16.75■□□□□ 0.27
CCDC90B-205ENST00000525916 MLLT1Q03111 559 aaPredicted RBP16.75■□□□□ 0.27
CCDC90B-205ENST00000525916 KDM3BQ7LBC6 1761 aa16.74■□□□□ 0.27
CCDC90B-205ENST00000525916 TRAF5O00463 557 aa16.74■□□□□ 0.27
CCDC90B-205ENST00000525916 GTF2E1P29083 439 aaPredicted RBP16.74■□□□□ 0.27
CCDC90B-205ENST00000525916 ECE1P42892 770 aa16.74■□□□□ 0.27
CCDC90B-205ENST00000525916 SLC51AQ86UW1 340 aa16.74■□□□□ 0.27
CCDC90B-205ENST00000525916 GPR101Q96P66 508 aaPredicted RBP16.74■□□□□ 0.27
CCDC90B-205ENST00000525916 BEGAINQ9BUH8 593 aa16.74■□□□□ 0.27
CCDC90B-205ENST00000525916 RSPH6AQ9H0K4 717 aa16.74■□□□□ 0.27
CCDC90B-205ENST00000525916 RGL2O15211 777 aa16.73■□□□□ 0.27
CCDC90B-205ENST00000525916 CRY2Q49AN0 593 aa16.73■□□□□ 0.27
CCDC90B-205ENST00000525916 MCM10Q7L590 875 aa16.73■□□□□ 0.27
CCDC90B-205ENST00000525916 NUTM1Q86Y26 1132 aa16.73■□□□□ 0.27
CCDC90B-205ENST00000525916 LAMB2P55268 1798 aa16.73■□□□□ 0.27
CCDC90B-205ENST00000525916 AOC2O75106 756 aa16.72■□□□□ 0.27
CCDC90B-205ENST00000525916 RGS19P49795 217 aa16.72■□□□□ 0.27
CCDC90B-205ENST00000525916 CST9Q5W186 159 aa16.72■□□□□ 0.27
CCDC90B-205ENST00000525916 LARGE2Q8N3Y3 721 aa16.71■□□□□ 0.27
CCDC90B-205ENST00000525916 TLL2Q9Y6L7 1015 aa16.71■□□□□ 0.27
CCDC90B-205ENST00000525916 RIC1Q4ADV7 1423 aa16.7■□□□□ 0.26
CCDC90B-205ENST00000525916 POLR2AP24928 1970 aaKnown RBP16.7■□□□□ 0.26
CCDC90B-205ENST00000525916 NPC1L1Q9UHC9 1359 aa16.7■□□□□ 0.26
CCDC90B-205ENST00000525916 DCTN1Q14203 1278 aa16.7■□□□□ 0.26
CCDC90B-205ENST00000525916 CC2D2BQ6DHV5 1058 aa16.7■□□□□ 0.26
CCDC90B-205ENST00000525916 USP50Q70EL3 339 aaPredicted RBP16.7■□□□□ 0.26
CCDC90B-205ENST00000525916 RPGRQ92834 1020 aaKnown RBP16.7■□□□□ 0.26
CCDC90B-205ENST00000525916 TNRC18O15417 2968 aaPredicted RBP16.7■□□□□ 0.26
CCDC90B-205ENST00000525916 NGEFQ8N5V2 710 aa16.69■□□□□ 0.26
CCDC90B-205ENST00000525916 RTF1Q92541 710 aaKnown RBP16.69■□□□□ 0.26
CCDC90B-205ENST00000525916 NYXQ9GZU5 481 aa16.69■□□□□ 0.26
CCDC90B-205ENST00000525916 TAF1P21675 1872 aa16.69■□□□□ 0.26
CCDC90B-205ENST00000525916 TCERG1O14776 1098 aaKnown RBP16.68■□□□□ 0.26
CCDC90B-205ENST00000525916 NIM1KQ8IY84 436 aa16.68■□□□□ 0.26
CCDC90B-205ENST00000525916 CFAP44Q96MT7 982 aa16.68■□□□□ 0.26
CCDC90B-205ENST00000525916 ANKRD36CQ5JPF3 1778 aa16.67■□□□□ 0.26
CCDC90B-205ENST00000525916 PPEF1O14829 653 aaPredicted RBP16.67■□□□□ 0.26
CCDC90B-205ENST00000525916 MCOLN1Q9GZU1 580 aa16.67■□□□□ 0.26
CCDC90B-205ENST00000525916 UBN2Q6ZU65 1347 aa16.67■□□□□ 0.26
CCDC90B-205ENST00000525916 IBTKQ9P2D0 1353 aaPredicted RBP16.66■□□□□ 0.26
CCDC90B-205ENST00000525916 PPIP5K2O43314 1243 aa16.66■□□□□ 0.26
CCDC90B-205ENST00000525916 CELF2O95319 508 aaKnown RBP16.66■□□□□ 0.26
CCDC90B-205ENST00000525916 GPTP24298 496 aa16.66■□□□□ 0.26
CCDC90B-205ENST00000525916 HOXA10P31260 410 aaPredicted RBP16.66■□□□□ 0.26
CCDC90B-205ENST00000525916 MAP2K2P36507 400 aa16.66■□□□□ 0.26
CCDC90B-205ENST00000525916 AOC3Q16853 763 aa16.66■□□□□ 0.26
CCDC90B-205ENST00000525916 SAPCD2Q86UD0 394 aa16.66■□□□□ 0.26
CCDC90B-205ENST00000525916 ADARB2Q9NS39 739 aaKnown RBP16.66■□□□□ 0.26
CCDC90B-205ENST00000525916 GPRC5DQ9NZD1 345 aa16.66■□□□□ 0.26
CCDC90B-205ENST00000525916 AKAP11Q9UKA4 1901 aa16.66■□□□□ 0.26
CCDC90B-205ENST00000525916 MAP3K15Q6ZN16 1313 aa16.66■□□□□ 0.26
CCDC90B-205ENST00000525916 PDE4DIPQ5VU43 2346 aa16.65■□□□□ 0.26
CCDC90B-205ENST00000525916 GRIPAP1Q4V328 841 aa16.65■□□□□ 0.26
CCDC90B-205ENST00000525916 TTLL7Q6ZT98 887 aa16.65■□□□□ 0.26
CCDC90B-205ENST00000525916 RBM17Q96I25 401 aaKnown RBP16.65■□□□□ 0.26
CCDC90B-205ENST00000525916 CFAP53Q96M91 514 aa16.65■□□□□ 0.26
CCDC90B-205ENST00000525916 GLIS2Q9BZE0 524 aaPredicted RBP16.65■□□□□ 0.26
CCDC90B-205ENST00000525916 MIS18AQ9NYP9 233 aa16.65■□□□□ 0.26
CCDC90B-205ENST00000525916 ERVV-1B6SEH8 477 aa16.64■□□□□ 0.25
CCDC90B-205ENST00000525916 U2AF1L5P0DN76 240 aaPredicted RBP16.64■□□□□ 0.25
CCDC90B-205ENST00000525916 U2AF1Q01081 240 aaKnown RBP eCLIP16.64■□□□□ 0.25
CCDC90B-205ENST00000525916 SUSD4Q5VX71 490 aa16.64■□□□□ 0.25
CCDC90B-205ENST00000525916 C3orf67Q6ZVT6 689 aa16.64■□□□□ 0.25
CCDC90B-205ENST00000525916 CRAMP1Q96RY5 1269 aa16.64■□□□□ 0.25
CCDC90B-205ENST00000525916 CA12O43570 354 aa16.63■□□□□ 0.25
CCDC90B-205ENST00000525916 TAF7Q15545 349 aaPredicted RBP16.63■□□□□ 0.25
CCDC90B-205ENST00000525916 KIF6Q6ZMV9 814 aa16.63■□□□□ 0.25
CCDC90B-205ENST00000525916 ZBTB3Q9H5J0 574 aa16.63■□□□□ 0.25
CCDC90B-205ENST00000525916 ZNF408Q9H9D4 720 aa16.63■□□□□ 0.25
CCDC90B-205ENST00000525916 NTSR2O95665 410 aa16.62■□□□□ 0.25
CCDC90B-205ENST00000525916 MYL6BP14649 208 aa16.62■□□□□ 0.25
CCDC90B-205ENST00000525916 GMPSP49915 693 aaPredicted RBP16.62■□□□□ 0.25
CCDC90B-205ENST00000525916 BRPF1P55201 1214 aaPredicted RBP16.62■□□□□ 0.25
CCDC90B-205ENST00000525916 CXCL9Q07325 125 aa16.62■□□□□ 0.25
CCDC90B-205ENST00000525916 DGKZQ13574 1117 aa16.62■□□□□ 0.25
CCDC90B-205ENST00000525916 NUDCQ9Y266 331 aa16.62■□□□□ 0.25
CCDC90B-205ENST00000525916 RRP7AQ9Y3A4 280 aaKnown RBP16.62■□□□□ 0.25
CCDC90B-205ENST00000525916 HTATSF1O43719 755 aaKnown RBP16.61■□□□□ 0.25
CCDC90B-205ENST00000525916 ZEB1P37275 1124 aaPredicted RBP16.61■□□□□ 0.25
CCDC90B-205ENST00000525916 CIAPIN1Q6FI81 312 aa16.61■□□□□ 0.25
CCDC90B-205ENST00000525916 HHIPL1Q96JK4 782 aa16.61■□□□□ 0.25
CCDC90B-205ENST00000525916 PCDH10Q9P2E7 1040 aa16.61■□□□□ 0.25
CCDC90B-205ENST00000525916 ZNF34Q8IZ26 560 aa16.6■□□□□ 0.25
CCDC90B-205ENST00000525916 ZNRF3Q9ULT6 936 aa16.6■□□□□ 0.25
CCDC90B-205ENST00000525916 ATP6V0A2Q9Y487 856 aa16.6■□□□□ 0.25
CCDC90B-205ENST00000525916 LRRC37AA6NMS7 1700 aa16.59■□□□□ 0.25
CCDC90B-205ENST00000525916 HIRAP54198 1017 aaPredicted RBP16.59■□□□□ 0.25
CCDC90B-205ENST00000525916 TRPM4Q8TD43 1214 aa16.59■□□□□ 0.25
CCDC90B-205ENST00000525916 ZIC5Q96T25 663 aa16.59■□□□□ 0.25
CCDC90B-205ENST00000525916 ABCC4O15439 1325 aa16.59■□□□□ 0.25
CCDC90B-205ENST00000525916 RTFDC1Q9BY42 306 aaPredicted RBP16.58■□□□□ 0.24
CCDC90B-205ENST00000525916 VPS33BQ9H267 617 aa16.58■□□□□ 0.24
CCDC90B-205ENST00000525916 PGAP2Q9UHJ9 254 aa16.58■□□□□ 0.24
CCDC90B-205ENST00000525916 DUOX1Q9NRD9 1551 aa16.58■□□□□ 0.24
CCDC90B-205ENST00000525916 DDX60Q8IY21 1712 aaKnown RBP16.57■□□□□ 0.24
CCDC90B-205ENST00000525916 CDHR2Q9BYE9 1310 aa16.57■□□□□ 0.24
CCDC90B-205ENST00000525916 SHTN1A0MZ66 631 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms