RNA–Protein interactions for RNA: ENST00000525669.5

PABPC4-220, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-220ENST00000525669 SPEF2Q9C093 1822 aa10.88□□□□□ -0.67
PABPC4-220ENST00000525669 COL15A1P39059 1388 aa10.88□□□□□ -0.67
PABPC4-220ENST00000525669 UBR3Q6ZT12 1888 aa10.87□□□□□ -0.67
PABPC4-220ENST00000525669 DDX60Q8IY21 1712 aaKnown RBP10.87□□□□□ -0.67
PABPC4-220ENST00000525669 H7C1W4 665 aa10.87□□□□□ -0.67
PABPC4-220ENST00000525669 POTEDQ86YR6 584 aa10.87□□□□□ -0.67
PABPC4-220ENST00000525669 OTUD7AQ8TE49 926 aaPredicted RBP10.87□□□□□ -0.67
PABPC4-220ENST00000525669 PA2G4Q9UQ80 394 aaKnown RBP10.87□□□□□ -0.67
PABPC4-220ENST00000525669 TUBGCP6Q96RT7 1819 aa10.86□□□□□ -0.67
PABPC4-220ENST00000525669 LAMB2P55268 1798 aa10.86□□□□□ -0.67
PABPC4-220ENST00000525669 SURF6O75683 361 aaKnown RBP10.86□□□□□ -0.67
PABPC4-220ENST00000525669 SYNE4Q8N205 404 aa10.86□□□□□ -0.67
PABPC4-220ENST00000525669 CCDC191Q8NCU4 936 aa10.86□□□□□ -0.67
PABPC4-220ENST00000525669 KLHDC4Q8TBB5 520 aa10.86□□□□□ -0.67
PABPC4-220ENST00000525669 ZBTB47Q9UFB7 747 aaPredicted RBP10.86□□□□□ -0.67
PABPC4-220ENST00000525669 IBTKQ9P2D0 1353 aaPredicted RBP10.86□□□□□ -0.67
PABPC4-220ENST00000525669 CNTNAP4Q9C0A0 1308 aa10.85□□□□□ -0.67
PABPC4-220ENST00000525669 FAM177BA6PVY3 158 aa10.85□□□□□ -0.67
PABPC4-220ENST00000525669 ERVV-1B6SEH8 477 aa10.85□□□□□ -0.67
PABPC4-220ENST00000525669 GNPATO15228 680 aa10.85□□□□□ -0.67
PABPC4-220ENST00000525669 CAMTA2O94983 1202 aa10.85□□□□□ -0.67
PABPC4-220ENST00000525669 FOXO4P98177 505 aa10.85□□□□□ -0.67
PABPC4-220ENST00000525669 MTX1Q13505 466 aa10.85□□□□□ -0.67
PABPC4-220ENST00000525669 NLRP10Q86W26 655 aa10.85□□□□□ -0.67
PABPC4-220ENST00000525669 AMIGO3Q86WK7 504 aa10.85□□□□□ -0.67
PABPC4-220ENST00000525669 FAM89AQ96GI7 184 aa10.85□□□□□ -0.67
PABPC4-220ENST00000525669 LRRC4BQ9NT99 713 aa10.85□□□□□ -0.67
PABPC4-220ENST00000525669 HDAC5Q9UQL6 1122 aa10.85□□□□□ -0.67
PABPC4-220ENST00000525669 UBN2Q6ZU65 1347 aa10.84□□□□□ -0.67
PABPC4-220ENST00000525669 PHF14O94880 888 aa10.84□□□□□ -0.67
PABPC4-220ENST00000525669 OS9Q13438 667 aaPredicted RBP10.84□□□□□ -0.67
PABPC4-220ENST00000525669 C8orf34Q49A92 452 aa10.84□□□□□ -0.67
PABPC4-220ENST00000525669 LMBR1LQ6UX01 489 aa10.84□□□□□ -0.67
PABPC4-220ENST00000525669 ZNF34Q8IZ26 560 aa10.84□□□□□ -0.67
PABPC4-220ENST00000525669 LRRCC1Q9C099 1032 aa10.84□□□□□ -0.67
PABPC4-220ENST00000525669 SIL1Q9H173 461 aa10.84□□□□□ -0.67
PABPC4-220ENST00000525669 IL1RAPL2Q9NP60 686 aa10.84□□□□□ -0.67
PABPC4-220ENST00000525669 SRP68Q9UHB9 627 aaKnown RBP10.84□□□□□ -0.67
PABPC4-220ENST00000525669 CHMP3Q9Y3E7 222 aa10.84□□□□□ -0.67
PABPC4-220ENST00000525669 AK9Q5TCS8 1911 aa10.84□□□□□ -0.67
PABPC4-220ENST00000525669 RPS6KA4O75676 772 aa10.83□□□□□ -0.68
PABPC4-220ENST00000525669 PCCAP05165 728 aaPredicted RBP10.83□□□□□ -0.68
PABPC4-220ENST00000525669 FAM161AQ3B820 660 aa10.83□□□□□ -0.68
PABPC4-220ENST00000525669 HSP90AB3PQ58FF7 597 aa10.83□□□□□ -0.68
PABPC4-220ENST00000525669 RC3H1Q5TC82 1133 aaKnown RBP10.83□□□□□ -0.68
PABPC4-220ENST00000525669 PLEKHM2Q8IWE5 1019 aa10.83□□□□□ -0.68
PABPC4-220ENST00000525669 CCDC85AQ96PX6 553 aaPredicted RBP10.83□□□□□ -0.68
PABPC4-220ENST00000525669 BACH2Q9BYV9 841 aa10.83□□□□□ -0.68
PABPC4-220ENST00000525669 RBM19Q9Y4C8 960 aaKnown RBP10.83□□□□□ -0.68
PABPC4-220ENST00000525669 COL24A1Q17RW2 1714 aa10.83□□□□□ -0.68
PABPC4-220ENST00000525669 RFX5P48382 616 aaPredicted RBP10.82□□□□□ -0.68
PABPC4-220ENST00000525669 TRIM28Q13263 835 aaKnown RBP10.82□□□□□ -0.68
PABPC4-220ENST00000525669 RABL6Q3YEC7 729 aaPredicted RBP10.82□□□□□ -0.68
PABPC4-220ENST00000525669 SUSD4Q5VX71 490 aa10.82□□□□□ -0.68
PABPC4-220ENST00000525669 USPL1Q5W0Q7 1092 aa10.82□□□□□ -0.68
PABPC4-220ENST00000525669 TSHZ3Q63HK5 1081 aa10.82□□□□□ -0.68
PABPC4-220ENST00000525669 BICDL1Q6ZP65 573 aa10.82□□□□□ -0.68
PABPC4-220ENST00000525669 NUTM1Q86Y26 1132 aa10.82□□□□□ -0.68
PABPC4-220ENST00000525669 ZBTB38Q8NAP3 1195 aaPredicted RBP10.82□□□□□ -0.68
PABPC4-220ENST00000525669 RHPN1Q8TCX5 695 aa10.82□□□□□ -0.68
PABPC4-220ENST00000525669 AK7Q96M32 723 aa10.82□□□□□ -0.68
PABPC4-220ENST00000525669 TRMT112Q9UI30 125 aaKnown RBP10.82□□□□□ -0.68
PABPC4-220ENST00000525669 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.82□□□□□ -0.68
PABPC4-220ENST00000525669 TAF1P21675 1872 aa10.81□□□□□ -0.68
PABPC4-220ENST00000525669 RAB11FIP3O75154 756 aa10.81□□□□□ -0.68
PABPC4-220ENST00000525669 APBA3O96018 575 aa10.81□□□□□ -0.68
PABPC4-220ENST00000525669 ARHGEF1Q92888 912 aaKnown RBP10.81□□□□□ -0.68
PABPC4-220ENST00000525669 ZNF594Q96JF6 807 aaPredicted RBP10.81□□□□□ -0.68
PABPC4-220ENST00000525669 BCL2L12Q9HB09 334 aa10.81□□□□□ -0.68
PABPC4-220ENST00000525669 NIP7Q9Y221 180 aaKnown RBP eCLIP10.81□□□□□ -0.68
PABPC4-220ENST00000525669 NOP58Q9Y2X3 529 aaKnown RBP10.81□□□□□ -0.68
PABPC4-220ENST00000525669 RTCBQ9Y3I0 505 aaKnown RBP10.81□□□□□ -0.68
PABPC4-220ENST00000525669 IRS4O14654 1257 aaPredicted RBP10.8□□□□□ -0.68
PABPC4-220ENST00000525669 SASH1O94885 1247 aa10.8□□□□□ -0.68
PABPC4-220ENST00000525669 G3BP1Q13283 466 aaKnown RBP eCLIP10.8□□□□□ -0.68
PABPC4-220ENST00000525669 TXNRD1Q16881 649 aa10.8□□□□□ -0.68
PABPC4-220ENST00000525669 TBC1D9BQ66K14 1250 aa10.8□□□□□ -0.68
PABPC4-220ENST00000525669 PROM2Q8N271 834 aa10.8□□□□□ -0.68
PABPC4-220ENST00000525669 CDHR2Q9BYE9 1310 aa10.8□□□□□ -0.68
PABPC4-220ENST00000525669 RGPD3A6NKT7 1758 aaPredicted RBP10.8□□□□□ -0.68
PABPC4-220ENST00000525669 RGPD4Q7Z3J3 1758 aa10.8□□□□□ -0.68
PABPC4-220ENST00000525669 SEC24BO95487 1268 aa10.79□□□□□ -0.68
PABPC4-220ENST00000525669 HCLS1P14317 486 aaPredicted RBP10.79□□□□□ -0.68
PABPC4-220ENST00000525669 GSPT1P15170 499 aaKnown RBP10.79□□□□□ -0.68
PABPC4-220ENST00000525669 PTPN12Q05209 780 aaKnown RBP10.79□□□□□ -0.68
PABPC4-220ENST00000525669 HSP90AB4PQ58FF6 505 aa10.79□□□□□ -0.68
PABPC4-220ENST00000525669 TTC22Q5TAA0 569 aa10.79□□□□□ -0.68
PABPC4-220ENST00000525669 KIF1BPQ96EK5 621 aa10.79□□□□□ -0.68
PABPC4-220ENST00000525669 UTP14AQ9BVJ6 771 aaKnown RBP10.79□□□□□ -0.68
PABPC4-220ENST00000525669 NARFQ9UHQ1 456 aa10.79□□□□□ -0.68
PABPC4-220ENST00000525669 ZNF652Q9Y2D9 606 aa10.79□□□□□ -0.68
PABPC4-220ENST00000525669 SALL3Q9BXA9 1300 aa10.79□□□□□ -0.68
PABPC4-220ENST00000525669 COL4A1P02462 1669 aa10.79□□□□□ -0.68
PABPC4-220ENST00000525669 ZPR1O75312 459 aa10.78□□□□□ -0.68
PABPC4-220ENST00000525669 NTSR2O95665 410 aa10.78□□□□□ -0.68
PABPC4-220ENST00000525669 MX1P20591 662 aa10.78□□□□□ -0.68
PABPC4-220ENST00000525669 RFC4P35249 363 aa10.78□□□□□ -0.68
PABPC4-220ENST00000525669 PDE1AP54750 535 aa10.78□□□□□ -0.68
PABPC4-220ENST00000525669 SLC27A3Q5K4L6 730 aa10.78□□□□□ -0.68
PABPC4-220ENST00000525669 TRAPPC3LQ5T215 181 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms