RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 UTP14AQ9BVJ6 771 aaKnown RBP23.89■■□□□ 1.41
TSPAN4-215ENST00000525334 PHAXQ9H814 394 aaKnown RBP23.89■■□□□ 1.41
TSPAN4-215ENST00000525334 SBF1O95248 1867 aa23.88■■□□□ 1.41
TSPAN4-215ENST00000525334 CRY2Q49AN0 593 aa23.88■■□□□ 1.41
TSPAN4-215ENST00000525334 CHMP4AQ9BY43 222 aa23.88■■□□□ 1.41
TSPAN4-215ENST00000525334 NFKBIEO00221 500 aa23.87■■□□□ 1.41
TSPAN4-215ENST00000525334 TWISTNBQ3B726 338 aaPredicted RBP23.87■■□□□ 1.41
TSPAN4-215ENST00000525334 RNF181Q9P0P0 153 aa23.87■■□□□ 1.41
TSPAN4-215ENST00000525334 RNF123Q5XPI4 1314 aa23.85■■□□□ 1.41
TSPAN4-215ENST00000525334 GOLGA2Q08379 1002 aa23.85■■□□□ 1.41
TSPAN4-215ENST00000525334 SPINK5Q9NQ38 1064 aaPredicted RBP23.85■■□□□ 1.41
TSPAN4-215ENST00000525334 FER1L6Q2WGJ9 1857 aa23.85■■□□□ 1.41
TSPAN4-215ENST00000525334 CCER2I3L3R5 266 aa23.84■■□□□ 1.41
TSPAN4-215ENST00000525334 PRELPP51888 382 aa23.84■■□□□ 1.41
TSPAN4-215ENST00000525334 C3orf67Q6ZVT6 689 aa23.84■■□□□ 1.41
TSPAN4-215ENST00000525334 ISCA1Q9BUE6 129 aa23.84■■□□□ 1.41
TSPAN4-215ENST00000525334 ATP5J2-PTCD1G3V325 749 aa23.83■■□□□ 1.41
TSPAN4-215ENST00000525334 TCERG1O14776 1098 aaKnown RBP23.83■■□□□ 1.41
TSPAN4-215ENST00000525334 LMNB1P20700 586 aa23.83■■□□□ 1.41
TSPAN4-215ENST00000525334 ALDH1B1P30837 517 aa23.83■■□□□ 1.41
TSPAN4-215ENST00000525334 SLC10A5Q5PT55 438 aa23.83■■□□□ 1.41
TSPAN4-215ENST00000525334 RIC3Q7Z5B4 369 aa23.83■■□□□ 1.41
TSPAN4-215ENST00000525334 C7orf43Q8WVR3 580 aa23.83■■□□□ 1.41
TSPAN4-215ENST00000525334 RPGRQ92834 1020 aaKnown RBP23.83■■□□□ 1.41
TSPAN4-215ENST00000525334 ZNF428Q96B54 188 aa23.83■■□□□ 1.41
TSPAN4-215ENST00000525334 TRMT112Q9UI30 125 aaKnown RBP23.83■■□□□ 1.41
TSPAN4-215ENST00000525334 KIF3CO14782 793 aa23.82■■□□□ 1.4
TSPAN4-215ENST00000525334 SOGA3Q5TF21 947 aa23.82■■□□□ 1.4
TSPAN4-215ENST00000525334 SYNE4Q8N205 404 aa23.82■■□□□ 1.4
TSPAN4-215ENST00000525334 STK31Q9BXU1 1019 aa23.82■■□□□ 1.4
TSPAN4-215ENST00000525334 ZNF521Q96K83 1311 aa23.82■■□□□ 1.4
TSPAN4-215ENST00000525334 HOXA10P31260 410 aaPredicted RBP23.81■■□□□ 1.4
TSPAN4-215ENST00000525334 EXOSC9Q06265 439 aaKnown RBP23.81■■□□□ 1.4
TSPAN4-215ENST00000525334 NLRP3Q96P20 1036 aa23.81■■□□□ 1.4
TSPAN4-215ENST00000525334 MYH16Q9H6N6 1097 aa23.81■■□□□ 1.4
TSPAN4-215ENST00000525334 SH3TC1Q8TE82 1336 aa23.81■■□□□ 1.4
TSPAN4-215ENST00000525334 TAOK3Q9H2K8 898 aa23.8■■□□□ 1.4
TSPAN4-215ENST00000525334 LAMB2P55268 1798 aa23.8■■□□□ 1.4
TSPAN4-215ENST00000525334 LTBP3Q9NS15 1303 aa23.8■■□□□ 1.4
TSPAN4-215ENST00000525334 CCDC88AQ3V6T2 1871 aa23.79■■□□□ 1.4
TSPAN4-215ENST00000525334 TIAM2Q8IVF5 1701 aa23.79■■□□□ 1.4
TSPAN4-215ENST00000525334 DDX58O95786 925 aaKnown RBP23.79■■□□□ 1.4
TSPAN4-215ENST00000525334 HCLS1P14317 486 aaPredicted RBP23.79■■□□□ 1.4
TSPAN4-215ENST00000525334 CCDC93Q567U6 631 aa23.79■■□□□ 1.4
TSPAN4-215ENST00000525334 OLFM4Q6UX06 510 aa23.79■■□□□ 1.4
TSPAN4-215ENST00000525334 TRIM28Q13263 835 aaKnown RBP23.78■■□□□ 1.4
TSPAN4-215ENST00000525334 RBM17Q96I25 401 aaKnown RBP23.78■■□□□ 1.4
TSPAN4-215ENST00000525334 MYD88Q99836 296 aa23.78■■□□□ 1.4
TSPAN4-215ENST00000525334 ZC3H4Q9UPT8 1303 aaKnown RBP23.78■■□□□ 1.4
TSPAN4-215ENST00000525334 DDX60Q8IY21 1712 aaKnown RBP23.77■■□□□ 1.4
TSPAN4-215ENST00000525334 VAMP4O75379 141 aa23.77■■□□□ 1.4
TSPAN4-215ENST00000525334 CRAMP1Q96RY5 1269 aa23.77■■□□□ 1.4
TSPAN4-215ENST00000525334 NMRK2Q9NPI5 230 aa23.77■■□□□ 1.4
TSPAN4-215ENST00000525334 SLC4A2P04920 1241 aa23.76■■□□□ 1.39
TSPAN4-215ENST00000525334 G2E3Q7L622 706 aa23.76■■□□□ 1.39
TSPAN4-215ENST00000525334 FAM89AQ96GI7 184 aa23.76■■□□□ 1.39
TSPAN4-215ENST00000525334 METTL22Q9BUU2 404 aaPredicted RBP23.76■■□□□ 1.39
TSPAN4-215ENST00000525334 MAP3K2Q9Y2U5 619 aa23.76■■□□□ 1.39
TSPAN4-215ENST00000525334 KSR2Q6VAB6 950 aa23.75■■□□□ 1.39
TSPAN4-215ENST00000525334 KDM2BQ8NHM5 1336 aa23.75■■□□□ 1.39
TSPAN4-215ENST00000525334 PI4KAP2A4QPH2 592 aa23.74■■□□□ 1.39
TSPAN4-215ENST00000525334 PI4KAP1Q8N8J0 262 aa23.74■■□□□ 1.39
TSPAN4-215ENST00000525334 DICER1Q9UPY3 1922 aaKnown RBP23.74■■□□□ 1.39
TSPAN4-215ENST00000525334 SNED1Q8TER0 1413 aa23.74■■□□□ 1.39
TSPAN4-215ENST00000525334 PPEF1O14829 653 aaPredicted RBP23.73■■□□□ 1.39
TSPAN4-215ENST00000525334 FKBP4Q02790 459 aaKnown RBP eCLIP23.73■■□□□ 1.391e-6■■■■□ 24.7
TSPAN4-215ENST00000525334 RTL5Q5HYW3 569 aaPredicted RBP23.73■■□□□ 1.39
TSPAN4-215ENST00000525334 DIEXFQ68CQ4 756 aaKnown RBP23.73■■□□□ 1.39
TSPAN4-215ENST00000525334 RTKN2Q8IZC4 609 aa23.73■■□□□ 1.39
TSPAN4-215ENST00000525334 ABCC4O15439 1325 aa23.73■■□□□ 1.39
TSPAN4-215ENST00000525334 GLTPD2A6NH11 291 aa23.72■■□□□ 1.39
TSPAN4-215ENST00000525334 FLIIQ13045 1269 aa23.72■■□□□ 1.39
TSPAN4-215ENST00000525334 SLC51AQ86UW1 340 aa23.72■■□□□ 1.39
TSPAN4-215ENST00000525334 CCDC191Q8NCU4 936 aa23.72■■□□□ 1.39
TSPAN4-215ENST00000525334 TOMM70O94826 608 aa23.71■■□□□ 1.39
TSPAN4-215ENST00000525334 ZBTB38Q8NAP3 1195 aaPredicted RBP23.71■■□□□ 1.39
TSPAN4-215ENST00000525334 RRAGCQ9HB90 399 aa23.71■■□□□ 1.39
TSPAN4-215ENST00000525334 CWC25Q9NXE8 425 aaPredicted RBP23.71■■□□□ 1.39
TSPAN4-215ENST00000525334 CACNA1FO60840 1977 aa23.71■■□□□ 1.39
TSPAN4-215ENST00000525334 IRS4O14654 1257 aaPredicted RBP23.7■■□□□ 1.38
TSPAN4-215ENST00000525334 CC2D2BQ6DHV5 1058 aa23.7■■□□□ 1.38
TSPAN4-215ENST00000525334 ZNF277Q9NRM2 450 aaPredicted RBP23.7■■□□□ 1.38
TSPAN4-215ENST00000525334 IGKV5-2P06315 115 aa23.69■■□□□ 1.38
TSPAN4-215ENST00000525334 DDX46Q7L014 1031 aaKnown RBP23.69■■□□□ 1.38
TSPAN4-215ENST00000525334 E9PSI1 815 aa23.68■■□□□ 1.38
TSPAN4-215ENST00000525334 PCCAP05165 728 aaPredicted RBP23.68■■□□□ 1.38
TSPAN4-215ENST00000525334 NEXNQ0ZGT2 675 aa23.68■■□□□ 1.38
TSPAN4-215ENST00000525334 FKBP5Q13451 457 aaPredicted RBP23.68■■□□□ 1.38
TSPAN4-215ENST00000525334 MIER1Q8N108 512 aa23.68■■□□□ 1.38
TSPAN4-215ENST00000525334 GRAPQ13588 217 aa23.67■■□□□ 1.38
TSPAN4-215ENST00000525334 SF3B3Q15393 1217 aaKnown RBP23.67■■□□□ 1.38
TSPAN4-215ENST00000525334 DPY19L2Q6NUT2 758 aa23.67■■□□□ 1.38
TSPAN4-215ENST00000525334 GRAPLQ8TC17 118 aaPredicted RBP23.67■■□□□ 1.38
TSPAN4-215ENST00000525334 PSMD1Q99460 953 aa23.67■■□□□ 1.38
TSPAN4-215ENST00000525334 ATP6V0A2Q9Y487 856 aa23.67■■□□□ 1.38
TSPAN4-215ENST00000525334 TAF1P21675 1872 aa23.66■■□□□ 1.38
TSPAN4-215ENST00000525334 BBOX1O75936 387 aa23.66■■□□□ 1.38
TSPAN4-215ENST00000525334 CWF19L2Q2TBE0 894 aaKnown RBP23.66■■□□□ 1.38
TSPAN4-215ENST00000525334 JARID2Q92833 1246 aaPredicted RBP23.66■■□□□ 1.38
TSPAN4-215ENST00000525334 NEURL1BA8MQ27 555 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms