RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 CCDC93Q567U6 631 aa24.07■■□□□ 1.44
CAPN1-203ENST00000525013 C7orf43Q8WVR3 580 aa24.07■■□□□ 1.44
CAPN1-203ENST00000525013 UTP14AQ9BVJ6 771 aaKnown RBP24.07■■□□□ 1.44
CAPN1-203ENST00000525013 RRAGCQ9HB90 399 aa24.07■■□□□ 1.44
CAPN1-203ENST00000525013 TOMM70O94826 608 aa24.06■■□□□ 1.44
CAPN1-203ENST00000525013 CRY2Q49AN0 593 aa24.06■■□□□ 1.44
CAPN1-203ENST00000525013 LTBP3Q9NS15 1303 aa24.06■■□□□ 1.44
CAPN1-203ENST00000525013 OLFM4Q6UX06 510 aa24.05■■□□□ 1.44
CAPN1-203ENST00000525013 HYPKQ9NX55 129 aa24.05■■□□□ 1.44
CAPN1-203ENST00000525013 GLTPD2A6NH11 291 aa24.04■■□□□ 1.44
CAPN1-203ENST00000525013 TCIRG1Q13488 830 aa24.04■■□□□ 1.44
CAPN1-203ENST00000525013 RIC1Q4ADV7 1423 aa24.03■■□□□ 1.44
CAPN1-203ENST00000525013 ANKRD13DQ6ZTN6 518 aa24.03■■□□□ 1.44
CAPN1-203ENST00000525013 NLRP10Q86W26 655 aa24.03■■□□□ 1.44
CAPN1-203ENST00000525013 NLRP3Q96P20 1036 aa24.03■■□□□ 1.44
CAPN1-203ENST00000525013 HSPA6P17066 643 aa24.02■■□□□ 1.44
CAPN1-203ENST00000525013 DPY19L2Q6NUT2 758 aa24.02■■□□□ 1.44
CAPN1-203ENST00000525013 C3orf67Q6ZVT6 689 aa24.02■■□□□ 1.44
CAPN1-203ENST00000525013 RTKN2Q8IZC4 609 aa24.02■■□□□ 1.44
CAPN1-203ENST00000525013 C8orf58Q8NAV2 365 aa24.02■■□□□ 1.44
CAPN1-203ENST00000525013 PLBD2Q8NHP8 589 aa24.02■■□□□ 1.44
CAPN1-203ENST00000525013 RBM17Q96I25 401 aaKnown RBP24.02■■□□□ 1.44
CAPN1-203ENST00000525013 CEP350Q5VT06 3117 aa24.01■■□□□ 1.43
CAPN1-203ENST00000525013 HOXA10P31260 410 aaPredicted RBP24.01■■□□□ 1.43
CAPN1-203ENST00000525013 ZNF428Q96B54 188 aa24.01■■□□□ 1.43
CAPN1-203ENST00000525013 TRMT112Q9UI30 125 aaKnown RBP24.01■■□□□ 1.43
CAPN1-203ENST00000525013 FKBP4Q02790 459 aaKnown RBP eCLIP24■■□□□ 1.43
CAPN1-203ENST00000525013 SLC10A5Q5PT55 438 aa24■■□□□ 1.43
CAPN1-203ENST00000525013 TCERG1O14776 1098 aaKnown RBP23.99■■□□□ 1.43
CAPN1-203ENST00000525013 CCDC27Q2M243 656 aa23.99■■□□□ 1.43
CAPN1-203ENST00000525013 WWC1Q8IX03 1113 aa23.99■■□□□ 1.43
CAPN1-203ENST00000525013 RBM46Q8TBY0 533 aaKnown RBP23.99■■□□□ 1.43
CAPN1-203ENST00000525013 TSR2Q969E8 191 aaKnown RBP23.99■■□□□ 1.43
CAPN1-203ENST00000525013 CRAMP1Q96RY5 1269 aa23.99■■□□□ 1.43
CAPN1-203ENST00000525013 ZNF277Q9NRM2 450 aaPredicted RBP23.99■■□□□ 1.43
CAPN1-203ENST00000525013 RNF123Q5XPI4 1314 aa23.99■■□□□ 1.43
CAPN1-203ENST00000525013 HCLS1P14317 486 aaPredicted RBP23.98■■□□□ 1.43
CAPN1-203ENST00000525013 VEGFAP15692 232 aaPredicted RBP23.98■■□□□ 1.43
CAPN1-203ENST00000525013 SYNE4Q8N205 404 aa23.98■■□□□ 1.43
CAPN1-203ENST00000525013 ATP5J2-PTCD1G3V325 749 aa23.97■■□□□ 1.43
CAPN1-203ENST00000525013 SH3TC1Q8TE82 1336 aa23.97■■□□□ 1.43
CAPN1-203ENST00000525013 CHMP4AQ9BY43 222 aa23.97■■□□□ 1.43
CAPN1-203ENST00000525013 SALL2Q9Y467 1007 aaPredicted RBP23.97■■□□□ 1.43
CAPN1-203ENST00000525013 LAMB2P55268 1798 aa23.96■■□□□ 1.43
CAPN1-203ENST00000525013 PPEF1O14829 653 aaPredicted RBP23.96■■□□□ 1.43
CAPN1-203ENST00000525013 GOLGA2Q08379 1002 aa23.96■■□□□ 1.43
CAPN1-203ENST00000525013 CCDC30Q5VVM6 783 aa23.96■■□□□ 1.43
CAPN1-203ENST00000525013 CC2D2BQ6DHV5 1058 aa23.96■■□□□ 1.43
CAPN1-203ENST00000525013 RIC3Q7Z5B4 369 aa23.96■■□□□ 1.43
CAPN1-203ENST00000525013 PHAXQ9H814 394 aaKnown RBP23.96■■□□□ 1.43
CAPN1-203ENST00000525013 TSPYL6Q8N831 410 aa23.95■■□□□ 1.42
CAPN1-203ENST00000525013 ISCA1Q9BUE6 129 aa23.94■■□□□ 1.42
CAPN1-203ENST00000525013 TMX4Q9H1E5 349 aaPredicted RBP23.94■■□□□ 1.42
CAPN1-203ENST00000525013 IARSP41252 1262 aaKnown RBP23.93■■□□□ 1.42
CAPN1-203ENST00000525013 FAM9BQ8IZU0 186 aa23.93■■□□□ 1.42
CAPN1-203ENST00000525013 WDR90Q96KV7 1748 aa23.93■■□□□ 1.42
CAPN1-203ENST00000525013 IL16Q14005 1332 aa23.92■■□□□ 1.42
CAPN1-203ENST00000525013 DDNO94850 711 aaPredicted RBP23.92■■□□□ 1.42
CAPN1-203ENST00000525013 FSTL1Q12841 308 aa23.92■■□□□ 1.42
CAPN1-203ENST00000525013 FAM89AQ96GI7 184 aa23.92■■□□□ 1.42
CAPN1-203ENST00000525013 PSMD1Q99460 953 aa23.92■■□□□ 1.42
CAPN1-203ENST00000525013 ABCC4O15439 1325 aa23.91■■□□□ 1.42
CAPN1-203ENST00000525013 GRIPAP1Q4V328 841 aa23.91■■□□□ 1.42
CAPN1-203ENST00000525013 NCBP3Q53F19 620 aaKnown RBP23.91■■□□□ 1.42
CAPN1-203ENST00000525013 RTL5Q5HYW3 569 aaPredicted RBP23.91■■□□□ 1.42
CAPN1-203ENST00000525013 DDX46Q7L014 1031 aaKnown RBP23.91■■□□□ 1.42
CAPN1-203ENST00000525013 TAF1P21675 1872 aa23.91■■□□□ 1.42
CAPN1-203ENST00000525013 POTECB2RU33 542 aa23.9■■□□□ 1.42
CAPN1-203ENST00000525013 APLP1P51693 650 aa23.9■■□□□ 1.42
CAPN1-203ENST00000525013 SLC51AQ86UW1 340 aa23.9■■□□□ 1.42
CAPN1-203ENST00000525013 SMC1BQ8NDV3 1235 aa23.9■■□□□ 1.42
CAPN1-203ENST00000525013 DDX58O95786 925 aaKnown RBP23.89■■□□□ 1.41
CAPN1-203ENST00000525013 TRIM28Q13263 835 aaKnown RBP23.89■■□□□ 1.41
CAPN1-203ENST00000525013 TWISTNBQ3B726 338 aaPredicted RBP23.89■■□□□ 1.41
CAPN1-203ENST00000525013 JDP2Q8WYK2 163 aa23.89■■□□□ 1.41
CAPN1-203ENST00000525013 MYD88Q99836 296 aa23.89■■□□□ 1.41
CAPN1-203ENST00000525013 STK31Q9BXU1 1019 aa23.89■■□□□ 1.41
CAPN1-203ENST00000525013 ATP6V0A2Q9Y487 856 aa23.89■■□□□ 1.41
CAPN1-203ENST00000525013 SNED1Q8TER0 1413 aa23.89■■□□□ 1.41
CAPN1-203ENST00000525013 DDX60Q8IY21 1712 aaKnown RBP23.89■■□□□ 1.41
CAPN1-203ENST00000525013 BBOX1O75936 387 aa23.88■■□□□ 1.41
CAPN1-203ENST00000525013 ZNF541Q9H0D2 1346 aa23.86■■□□□ 1.41
CAPN1-203ENST00000525013 WDR63Q8IWG1 891 aa23.86■■□□□ 1.41
CAPN1-203ENST00000525013 LARGE2Q8N3Y3 721 aa23.86■■□□□ 1.41
CAPN1-203ENST00000525013 FANCIQ9NVI1 1328 aa23.85■■□□□ 1.41
CAPN1-203ENST00000525013 IRS4O14654 1257 aaPredicted RBP23.85■■□□□ 1.41
CAPN1-203ENST00000525013 GRAPQ13588 217 aa23.85■■□□□ 1.41
CAPN1-203ENST00000525013 GRAPLQ8TC17 118 aaPredicted RBP23.85■■□□□ 1.41
CAPN1-203ENST00000525013 IQCA1LA6NCM1 817 aa23.84■■□□□ 1.41
CAPN1-203ENST00000525013 FZD9O00144 591 aa23.84■■□□□ 1.41
CAPN1-203ENST00000525013 SP8Q8IXZ3 490 aa23.84■■□□□ 1.41
CAPN1-203ENST00000525013 METTL22Q9BUU2 404 aaPredicted RBP23.84■■□□□ 1.41
CAPN1-203ENST00000525013 MAP3K2Q9Y2U5 619 aa23.84■■□□□ 1.41
CAPN1-203ENST00000525013 SCN4AP35499 1836 aa23.83■■□□□ 1.41
CAPN1-203ENST00000525013 ZBTB38Q8NAP3 1195 aaPredicted RBP23.83■■□□□ 1.41
CAPN1-203ENST00000525013 CCDC191Q8NCU4 936 aa23.83■■□□□ 1.41
CAPN1-203ENST00000525013 L3MBTL3Q96JM7 780 aaPredicted RBP23.83■■□□□ 1.41
CAPN1-203ENST00000525013 CWC25Q9NXE8 425 aaPredicted RBP23.83■■□□□ 1.41
CAPN1-203ENST00000525013 PI4KAP2A4QPH2 592 aa23.82■■□□□ 1.4
CAPN1-203ENST00000525013 PPIP5K2O43314 1243 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms