RNA–Protein interactions for RNA: ENST00000524654.1

CTSB-207, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-207ENST00000524654 KIF3CO14782 793 aa14.21□□□□□ -0.13
CTSB-207ENST00000524654 ALDH1B1P30837 517 aa14.21□□□□□ -0.13
CTSB-207ENST00000524654 HOXA10P31260 410 aaPredicted RBP14.21□□□□□ -0.13
CTSB-207ENST00000524654 SOGA3Q5TF21 947 aa14.21□□□□□ -0.13
CTSB-207ENST00000524654 TNRC6CQ9HCJ0 1690 aaKnown RBP14.2□□□□□ -0.14
CTSB-207ENST00000524654 C3orf67Q6ZVT6 689 aa14.2□□□□□ -0.14
CTSB-207ENST00000524654 WDR63Q8IWG1 891 aa14.2□□□□□ -0.14
CTSB-207ENST00000524654 FAM9BQ8IZU0 186 aa14.2□□□□□ -0.14
CTSB-207ENST00000524654 ISCA1Q9BUE6 129 aa14.2□□□□□ -0.14
CTSB-207ENST00000524654 CHMP4AQ9BY43 222 aa14.2□□□□□ -0.14
CTSB-207ENST00000524654 NUP98P52948 1817 aa14.2□□□□□ -0.14
CTSB-207ENST00000524654 CCDC30Q5VVM6 783 aa14.19□□□□□ -0.14
CTSB-207ENST00000524654 TAOK3Q9H2K8 898 aa14.19□□□□□ -0.14
CTSB-207ENST00000524654 PHAXQ9H814 394 aaKnown RBP14.19□□□□□ -0.14
CTSB-207ENST00000524654 TRIM28Q13263 835 aaKnown RBP14.18□□□□□ -0.14
CTSB-207ENST00000524654 CCDC93Q567U6 631 aa14.18□□□□□ -0.14
CTSB-207ENST00000524654 OLFM4Q6UX06 510 aa14.18□□□□□ -0.14
CTSB-207ENST00000524654 SYNE4Q8N205 404 aa14.18□□□□□ -0.14
CTSB-207ENST00000524654 RPGRQ92834 1020 aaKnown RBP14.18□□□□□ -0.14
CTSB-207ENST00000524654 NLRP3Q96P20 1036 aa14.18□□□□□ -0.14
CTSB-207ENST00000524654 CRAMP1Q96RY5 1269 aa14.18□□□□□ -0.14
CTSB-207ENST00000524654 NMRK2Q9NPI5 230 aa14.18□□□□□ -0.14
CTSB-207ENST00000524654 TRMT112Q9UI30 125 aaKnown RBP14.18□□□□□ -0.14
CTSB-207ENST00000524654 SLX4Q8IY92 1834 aa14.18□□□□□ -0.14
CTSB-207ENST00000524654 KDM2BQ8NHM5 1336 aa14.17□□□□□ -0.14
CTSB-207ENST00000524654 SH3TC1Q8TE82 1336 aa14.17□□□□□ -0.14
CTSB-207ENST00000524654 FANCIQ9NVI1 1328 aa14.17□□□□□ -0.14
CTSB-207ENST00000524654 SNED1Q8TER0 1413 aa14.17□□□□□ -0.14
CTSB-207ENST00000524654 TWISTNBQ3B726 338 aaPredicted RBP14.17□□□□□ -0.14
CTSB-207ENST00000524654 SALL2Q9Y467 1007 aaPredicted RBP14.17□□□□□ -0.14
CTSB-207ENST00000524654 ATP5J2-PTCD1G3V325 749 aa14.16□□□□□ -0.14
CTSB-207ENST00000524654 HCLS1P14317 486 aaPredicted RBP14.16□□□□□ -0.14
CTSB-207ENST00000524654 GOLGA2Q08379 1002 aa14.16□□□□□ -0.14
CTSB-207ENST00000524654 RIC3Q7Z5B4 369 aa14.16□□□□□ -0.14
CTSB-207ENST00000524654 RTKN2Q8IZC4 609 aa14.16□□□□□ -0.14
CTSB-207ENST00000524654 RBM17Q96I25 401 aaKnown RBP14.16□□□□□ -0.14
CTSB-207ENST00000524654 ARFGEF2Q9Y6D5 1785 aa14.16□□□□□ -0.14
CTSB-207ENST00000524654 GLTPD2A6NH11 291 aa14.15□□□□□ -0.14
CTSB-207ENST00000524654 FKBP4Q02790 459 aaKnown RBP eCLIP14.15□□□□□ -0.14
CTSB-207ENST00000524654 CC2D2BQ6DHV5 1058 aa14.15□□□□□ -0.14
CTSB-207ENST00000524654 ZNF428Q96B54 188 aa14.15□□□□□ -0.14
CTSB-207ENST00000524654 SPINK5Q9NQ38 1064 aaPredicted RBP14.15□□□□□ -0.14
CTSB-207ENST00000524654 TOMM70O94826 608 aa14.14□□□□□ -0.15
CTSB-207ENST00000524654 FAM89AQ96GI7 184 aa14.14□□□□□ -0.15
CTSB-207ENST00000524654 FER1L6Q2WGJ9 1857 aa14.14□□□□□ -0.15
CTSB-207ENST00000524654 ZNF521Q96K83 1311 aa14.14□□□□□ -0.15
CTSB-207ENST00000524654 SBF1O95248 1867 aa14.13□□□□□ -0.15
CTSB-207ENST00000524654 TCERG1O14776 1098 aaKnown RBP14.13□□□□□ -0.15
CTSB-207ENST00000524654 PPEF1O14829 653 aaPredicted RBP14.13□□□□□ -0.15
CTSB-207ENST00000524654 DDX58O95786 925 aaKnown RBP14.13□□□□□ -0.15
CTSB-207ENST00000524654 GRIPAP1Q4V328 841 aa14.13□□□□□ -0.15
CTSB-207ENST00000524654 SLC51AQ86UW1 340 aa14.13□□□□□ -0.15
CTSB-207ENST00000524654 PSMD1Q99460 953 aa14.13□□□□□ -0.15
CTSB-207ENST00000524654 METTL22Q9BUU2 404 aaPredicted RBP14.13□□□□□ -0.15
CTSB-207ENST00000524654 STK31Q9BXU1 1019 aa14.13□□□□□ -0.15
CTSB-207ENST00000524654 RRAGCQ9HB90 399 aa14.13□□□□□ -0.15
CTSB-207ENST00000524654 ANKRD36CQ5JPF3 1778 aa14.13□□□□□ -0.15
CTSB-207ENST00000524654 ABCC4O15439 1325 aa14.13□□□□□ -0.15
CTSB-207ENST00000524654 VAMP4O75379 141 aa14.12□□□□□ -0.15
CTSB-207ENST00000524654 SLC4A2P04920 1241 aa14.12□□□□□ -0.15
CTSB-207ENST00000524654 EXOSC9Q06265 439 aaKnown RBP14.12□□□□□ -0.15
CTSB-207ENST00000524654 DPY19L2Q6NUT2 758 aa14.12□□□□□ -0.15
CTSB-207ENST00000524654 KSR2Q6VAB6 950 aa14.12□□□□□ -0.15
CTSB-207ENST00000524654 MYD88Q99836 296 aa14.12□□□□□ -0.15
CTSB-207ENST00000524654 ZNF277Q9NRM2 450 aaPredicted RBP14.12□□□□□ -0.15
CTSB-207ENST00000524654 MAP3K2Q9Y2U5 619 aa14.12□□□□□ -0.15
CTSB-207ENST00000524654 ATP6V0A2Q9Y487 856 aa14.12□□□□□ -0.15
CTSB-207ENST00000524654 PI4KAP2A4QPH2 592 aa14.11□□□□□ -0.15
CTSB-207ENST00000524654 BBOX1O75936 387 aa14.11□□□□□ -0.15
CTSB-207ENST00000524654 SF3B3Q15393 1217 aaKnown RBP14.11□□□□□ -0.15
CTSB-207ENST00000524654 G2E3Q7L622 706 aa14.11□□□□□ -0.15
CTSB-207ENST00000524654 PI4KAP1Q8N8J0 262 aa14.11□□□□□ -0.15
CTSB-207ENST00000524654 ZBTB38Q8NAP3 1195 aaPredicted RBP14.11□□□□□ -0.15
CTSB-207ENST00000524654 CCDC191Q8NCU4 936 aa14.11□□□□□ -0.15
CTSB-207ENST00000524654 MYH16Q9H6N6 1097 aa14.11□□□□□ -0.15
CTSB-207ENST00000524654 POTECB2RU33 542 aa14.1□□□□□ -0.15
CTSB-207ENST00000524654 IRS4O14654 1257 aaPredicted RBP14.1□□□□□ -0.15
CTSB-207ENST00000524654 VEGFAP15692 232 aaPredicted RBP14.1□□□□□ -0.15
CTSB-207ENST00000524654 IARSP41252 1262 aaKnown RBP14.1□□□□□ -0.15
CTSB-207ENST00000524654 RTL5Q5HYW3 569 aaPredicted RBP14.1□□□□□ -0.15
CTSB-207ENST00000524654 DDX46Q7L014 1031 aaKnown RBP14.1□□□□□ -0.15
CTSB-207ENST00000524654 RBM46Q8TBY0 533 aaKnown RBP14.1□□□□□ -0.15
CTSB-207ENST00000524654 TIAM2Q8IVF5 1701 aa14.1□□□□□ -0.15
CTSB-207ENST00000524654 CCER2I3L3R5 266 aa14.09□□□□□ -0.15
CTSB-207ENST00000524654 PCCAP05165 728 aaPredicted RBP14.09□□□□□ -0.15
CTSB-207ENST00000524654 IGKV5-2P06315 115 aa14.09□□□□□ -0.15
CTSB-207ENST00000524654 GRAPQ13588 217 aa14.09□□□□□ -0.15
CTSB-207ENST00000524654 SP8Q8IXZ3 490 aa14.09□□□□□ -0.15
CTSB-207ENST00000524654 GRAPLQ8TC17 118 aaPredicted RBP14.09□□□□□ -0.15
CTSB-207ENST00000524654 CWC25Q9NXE8 425 aaPredicted RBP14.09□□□□□ -0.15
CTSB-207ENST00000524654 FZD9O00144 591 aa14.08□□□□□ -0.16
CTSB-207ENST00000524654 DDNO94850 711 aaPredicted RBP14.08□□□□□ -0.16
CTSB-207ENST00000524654 HSPA6P17066 643 aa14.08□□□□□ -0.16
CTSB-207ENST00000524654 FLIIQ13045 1269 aa14.08□□□□□ -0.16
CTSB-207ENST00000524654 C16orf71Q8IYS4 520 aaPredicted RBP14.08□□□□□ -0.16
CTSB-207ENST00000524654 RTFDC1Q9BY42 306 aaPredicted RBP14.08□□□□□ -0.16
CTSB-207ENST00000524654 HSP90B1P14625 803 aaKnown RBP14.07□□□□□ -0.16
CTSB-207ENST00000524654 TMC4Q7Z404 712 aa14.07□□□□□ -0.16
CTSB-207ENST00000524654 L3MBTL3Q96JM7 780 aaPredicted RBP14.07□□□□□ -0.16
CTSB-207ENST00000524654 TMX4Q9H1E5 349 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms