RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 TIAM2Q8IVF5 1701 aa22.41■■□□□ 1.18
PACSIN3-202ENST00000524509 NFIXQ14938 502 aa22.41■■□□□ 1.18
PACSIN3-202ENST00000524509 PARP10Q53GL7 1025 aa22.41■■□□□ 1.18
PACSIN3-202ENST00000524509 TTLL6Q8N841 843 aa22.41■■□□□ 1.18
PACSIN3-202ENST00000524509 NPHP1O15259 732 aa22.4■■□□□ 1.18
PACSIN3-202ENST00000524509 FLIIQ13045 1269 aa22.4■■□□□ 1.18
PACSIN3-202ENST00000524509 NYXQ9GZU5 481 aa22.4■■□□□ 1.18
PACSIN3-202ENST00000524509 NIP7Q9Y221 180 aaKnown RBP eCLIP22.4■■□□□ 1.18
PACSIN3-202ENST00000524509 CCDC88AQ3V6T2 1871 aa22.4■■□□□ 1.18
PACSIN3-202ENST00000524509 NEXNQ0ZGT2 675 aa22.39■■□□□ 1.17
PACSIN3-202ENST00000524509 TBC1D9BQ66K14 1250 aa22.39■■□□□ 1.17
PACSIN3-202ENST00000524509 KSR2Q6VAB6 950 aa22.39■■□□□ 1.17
PACSIN3-202ENST00000524509 PHAXQ9H814 394 aaKnown RBP22.39■■□□□ 1.17
PACSIN3-202ENST00000524509 BRPF1P55201 1214 aaPredicted RBP22.38■■□□□ 1.17
PACSIN3-202ENST00000524509 FKBP5Q13451 457 aaPredicted RBP22.38■■□□□ 1.17
PACSIN3-202ENST00000524509 TCIRG1Q13488 830 aa22.38■■□□□ 1.17
PACSIN3-202ENST00000524509 HLFQ16534 295 aa22.38■■□□□ 1.17
PACSIN3-202ENST00000524509 TPTE2Q6XPS3 522 aa22.38■■□□□ 1.17
PACSIN3-202ENST00000524509 BICDL1Q6ZP65 573 aa22.38■■□□□ 1.17
PACSIN3-202ENST00000524509 PPP1R42Q7Z4L9 355 aa22.38■■□□□ 1.17
PACSIN3-202ENST00000524509 SMC4Q9NTJ3 1288 aa22.38■■□□□ 1.17
PACSIN3-202ENST00000524509 PTPRCP08575 1304 aa22.37■■□□□ 1.17
PACSIN3-202ENST00000524509 TCERG1O14776 1098 aaKnown RBP22.37■■□□□ 1.17
PACSIN3-202ENST00000524509 SERPINB2P05120 415 aa22.37■■□□□ 1.17
PACSIN3-202ENST00000524509 PDZRN3Q9UPQ7 1066 aa22.37■■□□□ 1.17
PACSIN3-202ENST00000524509 RNF123Q5XPI4 1314 aa22.36■■□□□ 1.17
PACSIN3-202ENST00000524509 NFKBIEO00221 500 aa22.36■■□□□ 1.17
PACSIN3-202ENST00000524509 TRIM28Q13263 835 aaKnown RBP22.36■■□□□ 1.17
PACSIN3-202ENST00000524509 NBPF5PQ86XG9 351 aaPredicted RBP22.36■■□□□ 1.17
PACSIN3-202ENST00000524509 C2CD5Q86YS7 1000 aa22.36■■□□□ 1.17
PACSIN3-202ENST00000524509 ZNF34Q8IZ26 560 aa22.36■■□□□ 1.17
PACSIN3-202ENST00000524509 SSH1Q8WYL5 1049 aa22.36■■□□□ 1.17
PACSIN3-202ENST00000524509 YTHDC1Q96MU7 727 aaKnown RBP22.36■■□□□ 1.17
PACSIN3-202ENST00000524509 POTECB2RU33 542 aa22.35■■□□□ 1.17
PACSIN3-202ENST00000524509 H0YIN7 160 aa22.35■■□□□ 1.17
PACSIN3-202ENST00000524509 HSP90B1P14625 803 aaKnown RBP22.35■■□□□ 1.17
PACSIN3-202ENST00000524509 GTF2E1P29083 439 aaPredicted RBP22.35■■□□□ 1.17
PACSIN3-202ENST00000524509 ST5P78524 1137 aa22.35■■□□□ 1.17
PACSIN3-202ENST00000524509 MRPL50Q8N5N7 158 aaKnown RBP22.35■■□□□ 1.17
PACSIN3-202ENST00000524509 SCN7AQ01118 1682 aa22.35■■□□□ 1.17
PACSIN3-202ENST00000524509 KIF16BQ96L93 1317 aa22.34■■□□□ 1.17
PACSIN3-202ENST00000524509 PI4KAP2A4QPH2 592 aa22.34■■□□□ 1.17
PACSIN3-202ENST00000524509 IPO8O15397 1037 aaKnown RBP22.34■■□□□ 1.17
PACSIN3-202ENST00000524509 RARSP54136 660 aaKnown RBP22.34■■□□□ 1.17
PACSIN3-202ENST00000524509 DPY19L2Q6NUT2 758 aa22.34■■□□□ 1.17
PACSIN3-202ENST00000524509 PI4KAP1Q8N8J0 262 aa22.34■■□□□ 1.17
PACSIN3-202ENST00000524509 CNBD1Q8NA66 436 aa22.34■■□□□ 1.17
PACSIN3-202ENST00000524509 METTL22Q9BUU2 404 aaPredicted RBP22.34■■□□□ 1.17
PACSIN3-202ENST00000524509 IBTKQ9P2D0 1353 aaPredicted RBP22.34■■□□□ 1.17
PACSIN3-202ENST00000524509 MAP3K2Q9Y2U5 619 aa22.33■■□□□ 1.17
PACSIN3-202ENST00000524509 DICER1Q9UPY3 1922 aaKnown RBP22.32■■□□□ 1.16
PACSIN3-202ENST00000524509 G2E3Q7L622 706 aa22.32■■□□□ 1.16
PACSIN3-202ENST00000524509 CCDC191Q8NCU4 936 aa22.32■■□□□ 1.16
PACSIN3-202ENST00000524509 DNAAF4Q8WXU2 420 aa22.32■■□□□ 1.16
PACSIN3-202ENST00000524509 GPTP24298 496 aa22.31■■□□□ 1.16
PACSIN3-202ENST00000524509 ARHGAP45Q92619 1136 aa22.31■■□□□ 1.16
PACSIN3-202ENST00000524509 ISCA1Q9BUE6 129 aa22.31■■□□□ 1.16
PACSIN3-202ENST00000524509 UTP14AQ9BVJ6 771 aaKnown RBP22.31■■□□□ 1.16
PACSIN3-202ENST00000524509 CACNA1FO60840 1977 aa22.3■■□□□ 1.16
PACSIN3-202ENST00000524509 BCORQ6W2J9 1755 aa22.3■■□□□ 1.16
PACSIN3-202ENST00000524509 PDE6BP35913 854 aa22.3■■□□□ 1.16
PACSIN3-202ENST00000524509 BRIP1Q9BX63 1249 aa22.3■■□□□ 1.16
PACSIN3-202ENST00000524509 API5Q9BZZ5 524 aaKnown RBP22.3■■□□□ 1.16
PACSIN3-202ENST00000524509 NLRP10Q86W26 655 aa22.29■■□□□ 1.16
PACSIN3-202ENST00000524509 MYD88Q99836 296 aa22.29■■□□□ 1.16
PACSIN3-202ENST00000524509 CREBZFQ9NS37 354 aa22.29■■□□□ 1.16
PACSIN3-202ENST00000524509 FER1L6Q2WGJ9 1857 aa22.28■■□□□ 1.16
PACSIN3-202ENST00000524509 ERFEQ4G0M1 354 aa22.28■■□□□ 1.16
PACSIN3-202ENST00000524509 PRR5LQ6MZQ0 368 aa22.28■■□□□ 1.16
PACSIN3-202ENST00000524509 LINS1Q8NG48 757 aa22.28■■□□□ 1.16
PACSIN3-202ENST00000524509 CWC25Q9NXE8 425 aaPredicted RBP22.28■■□□□ 1.16
PACSIN3-202ENST00000524509 ANKRD31Q8N7Z5 1873 aa22.28■■□□□ 1.16
PACSIN3-202ENST00000524509 CHADLQ6NUI6 762 aa22.27■■□□□ 1.16
PACSIN3-202ENST00000524509 BCL2L13Q9BXK5 485 aa22.27■■□□□ 1.16
PACSIN3-202ENST00000524509 TRMT112Q9UI30 125 aaKnown RBP22.27■■□□□ 1.16
PACSIN3-202ENST00000524509 SUSD4Q5VX71 490 aa22.26■■□□□ 1.15
PACSIN3-202ENST00000524509 UBN2Q6ZU65 1347 aa22.26■■□□□ 1.15
PACSIN3-202ENST00000524509 SH3TC1Q8TE82 1336 aa22.26■■□□□ 1.15
PACSIN3-202ENST00000524509 LTBP3Q9NS15 1303 aa22.26■■□□□ 1.15
PACSIN3-202ENST00000524509 ATP5J2-PTCD1G3V325 749 aa22.25■■□□□ 1.15
PACSIN3-202ENST00000524509 C21orf2O43822 256 aa22.25■■□□□ 1.15
PACSIN3-202ENST00000524509 ZNF622Q969S3 477 aaKnown RBP eCLIP22.25■■□□□ 1.15
PACSIN3-202ENST00000524509 NOB1Q9ULX3 412 aaKnown RBP22.25■■□□□ 1.15
PACSIN3-202ENST00000524509 FAM177BA6PVY3 158 aa22.24■■□□□ 1.15
PACSIN3-202ENST00000524509 ALDH1L1O75891 902 aa22.24■■□□□ 1.15
PACSIN3-202ENST00000524509 NTSR2O95665 410 aa22.24■■□□□ 1.15
PACSIN3-202ENST00000524509 MS4A1P11836 297 aa22.24■■□□□ 1.15
PACSIN3-202ENST00000524509 ZBTB38Q8NAP3 1195 aaPredicted RBP22.24■■□□□ 1.15
PACSIN3-202ENST00000524509 COL11A2P13942 1736 aaPredicted RBP22.23■■□□□ 1.15
PACSIN3-202ENST00000524509 SLC10A5Q5PT55 438 aa22.23■■□□□ 1.15
PACSIN3-202ENST00000524509 NLRP3Q96P20 1036 aa22.23■■□□□ 1.15
PACSIN3-202ENST00000524509 SRCIN1Q9C0H9 1055 aa22.23■■□□□ 1.15
PACSIN3-202ENST00000524509 MKRN1Q9UHC7 482 aaKnown RBP22.23■■□□□ 1.15
PACSIN3-202ENST00000524509 RCAN3Q9UKA8 241 aa22.23■■□□□ 1.15
PACSIN3-202ENST00000524509 NEURL1BA8MQ27 555 aa22.22■■□□□ 1.15
PACSIN3-202ENST00000524509 PCCAP05165 728 aaPredicted RBP22.22■■□□□ 1.15
PACSIN3-202ENST00000524509 CCT4P50991 539 aaKnown RBP22.22■■□□□ 1.15
PACSIN3-202ENST00000524509 ZKSCAN2Q63HK3 967 aa22.22■■□□□ 1.15
PACSIN3-202ENST00000524509 SLC4A10Q6U841 1118 aa22.22■■□□□ 1.15
PACSIN3-202ENST00000524509 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms