RNA–Protein interactions for RNA: ENST00000524238.3

HMBOX1-211, Transcript of homeobox containing 1, humanhuman

TSL 2 BASIC

Gene HMBOX1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-211ENST00000524238 ANO10Q9NW15 660 aa8.85□□□□□ -0.99
HMBOX1-211ENST00000524238 CWC15Q9P013 229 aaKnown RBP8.85□□□□□ -0.99
HMBOX1-211ENST00000524238 F6X3S4 739 aa8.85□□□□□ -0.99
HMBOX1-211ENST00000524238 H2AFXP16104 143 aaPredicted RBP8.85□□□□□ -0.99
HMBOX1-211ENST00000524238 LIG1P18858 919 aa8.85□□□□□ -0.99
HMBOX1-211ENST00000524238 EIF4A2Q14240 407 aaKnown RBP8.85□□□□□ -0.99
HMBOX1-211ENST00000524238 CAMK4Q16566 473 aa8.85□□□□□ -0.99
HMBOX1-211ENST00000524238 FBXO38Q6PIJ6 1188 aa8.85□□□□□ -0.99
HMBOX1-211ENST00000524238 MCM10Q7L590 875 aa8.85□□□□□ -0.99
HMBOX1-211ENST00000524238 ERC1Q8IUD2 1116 aa8.85□□□□□ -0.99
HMBOX1-211ENST00000524238 RASEFQ8IZ41 740 aa8.85□□□□□ -0.99
HMBOX1-211ENST00000524238 CCAR2Q8N163 923 aaKnown RBP8.85□□□□□ -0.99
HMBOX1-211ENST00000524238 LEO1Q8WVC0 666 aaPredicted RBP8.85□□□□□ -0.99
HMBOX1-211ENST00000524238 L2HGDHQ9H9P8 463 aa8.85□□□□□ -0.99
HMBOX1-211ENST00000524238 HMG20BQ9P0W2 317 aa8.85□□□□□ -0.99
HMBOX1-211ENST00000524238 LRRFIP2Q9Y608 721 aaKnown RBP8.85□□□□□ -0.99
HMBOX1-211ENST00000524238 CCDC61Q9Y6R9 512 aa8.85□□□□□ -0.99
HMBOX1-211ENST00000524238 RIMBP3CA6NJZ7 1639 aa8.84□□□□□ -0.99
HMBOX1-211ENST00000524238 RIMBP3BA6NNM3 1639 aa8.84□□□□□ -0.99
HMBOX1-211ENST00000524238 RIMBP3Q9UFD9 1639 aa8.84□□□□□ -0.99
HMBOX1-211ENST00000524238 DIP2CQ9Y2E4 1556 aa8.84□□□□□ -0.99
HMBOX1-211ENST00000524238 SURF6O75683 361 aaKnown RBP8.84□□□□□ -0.99
HMBOX1-211ENST00000524238 SNW1Q13573 536 aaKnown RBP8.84□□□□□ -0.99
HMBOX1-211ENST00000524238 TPRNQ4KMQ1 711 aa8.84□□□□□ -0.99
HMBOX1-211ENST00000524238 G2E3Q7L622 706 aa8.84□□□□□ -0.99
HMBOX1-211ENST00000524238 CKAP2LQ8IYA6 745 aa8.84□□□□□ -0.99
HMBOX1-211ENST00000524238 EVI5LQ96CN4 794 aa8.84□□□□□ -0.99
HMBOX1-211ENST00000524238 OSBPL5Q9H0X9 879 aaPredicted RBP8.84□□□□□ -0.99
HMBOX1-211ENST00000524238 NRBP1Q9UHY1 535 aa8.84□□□□□ -0.99
HMBOX1-211ENST00000524238 LRRC37A3O60309 1634 aa8.84□□□□□ -0.99
HMBOX1-211ENST00000524238 NALCNQ8IZF0 1738 aa8.83□□□□□ -1
HMBOX1-211ENST00000524238 CCDC69A6NI79 296 aa8.83□□□□□ -1
HMBOX1-211ENST00000524238 KRT32Q14532 448 aa8.83□□□□□ -1
HMBOX1-211ENST00000524238 RRS1Q15050 365 aaKnown RBP8.83□□□□□ -1
HMBOX1-211ENST00000524238 IQCB1Q15051 598 aa8.83□□□□□ -1
HMBOX1-211ENST00000524238 NECTIN1Q15223 517 aa8.83□□□□□ -1
HMBOX1-211ENST00000524238 ELF2Q15723 593 aa8.83□□□□□ -1
HMBOX1-211ENST00000524238 ME3Q16798 604 aa8.83□□□□□ -1
HMBOX1-211ENST00000524238 MUM1L1Q5H9M0 696 aa8.83□□□□□ -1
HMBOX1-211ENST00000524238 CTR9Q6PD62 1173 aa8.83□□□□□ -1
HMBOX1-211ENST00000524238 BLOC1S2Q6QNY1 142 aa8.83□□□□□ -1
HMBOX1-211ENST00000524238 TMCO3Q6UWJ1 677 aa8.83□□□□□ -1
HMBOX1-211ENST00000524238 CWC27Q6UX04 472 aaKnown RBP8.83□□□□□ -1
HMBOX1-211ENST00000524238 CEP57L1Q8IYX8 460 aa8.83□□□□□ -1
HMBOX1-211ENST00000524238 CLASRPQ8N2M8 674 aaKnown RBP8.83□□□□□ -1
HMBOX1-211ENST00000524238 DNAJC25Q9H1X3 360 aa8.83□□□□□ -1
HMBOX1-211ENST00000524238 LARGE1O95461 756 aa8.83□□□□□ -1
HMBOX1-211ENST00000524238 FBLN1P23142 703 aa8.83□□□□□ -1
HMBOX1-211ENST00000524238 PRPF40BQ6NWY9 871 aaKnown RBP8.83□□□□□ -1
HMBOX1-211ENST00000524238 CCDC73Q6ZRK6 1079 aa8.83□□□□□ -1
HMBOX1-211ENST00000524238 NUTM1Q86Y26 1132 aa8.83□□□□□ -1
HMBOX1-211ENST00000524238 IL1RAPL2Q9NP60 686 aa8.83□□□□□ -1
HMBOX1-211ENST00000524238 PHLPP2Q6ZVD8 1323 aa8.82□□□□□ -1
HMBOX1-211ENST00000524238 CPS1P31327 1500 aa8.82□□□□□ -1
HMBOX1-211ENST00000524238 NPM1P06748 294 aaKnown RBP eCLIP8.82□□□□□ -1
HMBOX1-211ENST00000524238 CCZ1BP86790 482 aa8.82□□□□□ -1
HMBOX1-211ENST00000524238 CCZ1P86791 482 aaPredicted RBP8.82□□□□□ -1
HMBOX1-211ENST00000524238 ZRSR1Q15695 479 aaKnown RBP8.82□□□□□ -1
HMBOX1-211ENST00000524238 CCDC144BQ3MJ40 725 aa8.82□□□□□ -1
HMBOX1-211ENST00000524238 CDC37L1Q7L3B6 337 aa8.82□□□□□ -1
HMBOX1-211ENST00000524238 PPP1R42Q7Z4L9 355 aa8.82□□□□□ -1
HMBOX1-211ENST00000524238 CCDC144CPQ8IYA2 1237 aa8.82□□□□□ -1
HMBOX1-211ENST00000524238 NUDT16Q96DE0 195 aaKnown RBP8.82□□□□□ -1
HMBOX1-211ENST00000524238 USP44Q9H0E7 712 aa8.82□□□□□ -1
HMBOX1-211ENST00000524238 IL25Q9H293 177 aa8.82□□□□□ -1
HMBOX1-211ENST00000524238 EFCC1Q9HA90 598 aa8.82□□□□□ -1
HMBOX1-211ENST00000524238 SNRKQ9NRH2 765 aa8.82□□□□□ -1
HMBOX1-211ENST00000524238 ECHDC1Q9NTX5 307 aa8.82□□□□□ -1
HMBOX1-211ENST00000524238 STAG3Q9UJ98 1225 aa8.82□□□□□ -1
HMBOX1-211ENST00000524238 FMN2Q9NZ56 1722 aa8.82□□□□□ -1
HMBOX1-211ENST00000524238 KINO60870 393 aaKnown RBP8.81□□□□□ -1
HMBOX1-211ENST00000524238 NR1I2O75469 434 aa8.81□□□□□ -1
HMBOX1-211ENST00000524238 TSGA10IPQ3SY00 556 aa8.81□□□□□ -1
HMBOX1-211ENST00000524238 CREB3L3Q68CJ9 461 aa8.81□□□□□ -1
HMBOX1-211ENST00000524238 UBXN4Q92575 508 aa8.81□□□□□ -1
HMBOX1-211ENST00000524238 MAP4K1Q92918 833 aa8.81□□□□□ -1
HMBOX1-211ENST00000524238 AK7Q96M32 723 aa8.81□□□□□ -1
HMBOX1-211ENST00000524238 ZNF396Q96N95 335 aaPredicted RBP8.81□□□□□ -1
HMBOX1-211ENST00000524238 BPIFA3Q9BQP9 254 aa8.81□□□□□ -1
HMBOX1-211ENST00000524238 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.81□□□□□ -1
HMBOX1-211ENST00000524238 TPCN1Q9ULQ1 816 aa8.81□□□□□ -1
HMBOX1-211ENST00000524238 SPG7Q9UQ90 795 aa8.81□□□□□ -1
HMBOX1-211ENST00000524238 CHMP3Q9Y3E7 222 aa8.81□□□□□ -1
HMBOX1-211ENST00000524238 OVOS2A0A0J9YW53 1432 aa8.81□□□□□ -1
HMBOX1-211ENST00000524238 OVOS2Q6IE36 1432 aa8.81□□□□□ -1
HMBOX1-211ENST00000524238 KDRP35968 1356 aa8.81□□□□□ -1
HMBOX1-211ENST00000524238 ERICH4A6NGS2 130 aa8.8□□□□□ -1
HMBOX1-211ENST00000524238 H3BQV1 296 aa8.8□□□□□ -1
HMBOX1-211ENST00000524238 SRGAP3O43295 1099 aa8.8□□□□□ -1
HMBOX1-211ENST00000524238 PNMA6AP0CW24 399 aaPredicted RBP8.8□□□□□ -1
HMBOX1-211ENST00000524238 RPS6KB1P23443 525 aa8.8□□□□□ -1
HMBOX1-211ENST00000524238 OS9Q13438 667 aaPredicted RBP8.8□□□□□ -1
HMBOX1-211ENST00000524238 NAA30Q147X3 362 aaPredicted RBP8.8□□□□□ -1
HMBOX1-211ENST00000524238 CCDC93Q567U6 631 aa8.8□□□□□ -1
HMBOX1-211ENST00000524238 IFFO2Q5TF58 517 aa8.8□□□□□ -1
HMBOX1-211ENST00000524238 JAKMIP3Q5VZ66 844 aa8.8□□□□□ -1
HMBOX1-211ENST00000524238 FCHSD1Q86WN1 690 aa8.8□□□□□ -1
HMBOX1-211ENST00000524238 LLPHQ9BRT6 129 aaKnown RBP8.8□□□□□ -1
HMBOX1-211ENST00000524238 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.8□□□□□ -14e-8■■■□□ 16.2
HMBOX1-211ENST00000524238 RBM8AQ9Y5S9 174 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms