RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 TAL1P17542 331 aaPredicted RBP9.31□□□□□ -0.92
NPM1-212ENST00000524204 SLC9A9Q8IVB4 645 aa9.31□□□□□ -0.92
NPM1-212ENST00000524204 MED26O95402 600 aa9.3□□□□□ -0.92
NPM1-212ENST00000524204 TYRO3Q06418 890 aa9.3□□□□□ -0.92
NPM1-212ENST00000524204 CD97P48960 835 aa9.29□□□□□ -0.92
NPM1-212ENST00000524204 IRAK1P51617 712 aa9.29□□□□□ -0.92
NPM1-212ENST00000524204 FZD5Q13467 585 aa9.29□□□□□ -0.92
NPM1-212ENST00000524204 FBXO11Q86XK2 927 aa9.29□□□□□ -0.92
NPM1-212ENST00000524204 TNS4Q8IZW8 715 aa9.29□□□□□ -0.92
NPM1-212ENST00000524204 KRTAP4-9Q9BYQ8 210 aa9.29□□□□□ -0.92
NPM1-212ENST00000524204 OAS3Q9Y6K5 1087 aaKnown RBP9.29□□□□□ -0.92
NPM1-212ENST00000524204 SERTM1A2A2V5 107 aa9.28□□□□□ -0.92
NPM1-212ENST00000524204 PIK3CDO00329 1044 aa9.28□□□□□ -0.92
NPM1-212ENST00000524204 DNAJB12Q9NXW2 375 aaKnown RBP9.28□□□□□ -0.92
NPM1-212ENST00000524204 GTF3C3Q9Y5Q9 886 aa9.28□□□□□ -0.92
NPM1-212ENST00000524204 FSTP19883 344 aa9.27□□□□□ -0.93
NPM1-212ENST00000524204 MSL1Q68DK7 614 aa9.27□□□□□ -0.93
NPM1-212ENST00000524204 HCN4Q9Y3Q4 1203 aa9.27□□□□□ -0.93
NPM1-212ENST00000524204 RGS9O75916 674 aaPredicted RBP9.26□□□□□ -0.93
NPM1-212ENST00000524204 GRIK5Q16478 980 aa9.26□□□□□ -0.93
NPM1-212ENST00000524204 SUSD3Q96L08 255 aa9.26□□□□□ -0.93
NPM1-212ENST00000524204 PLAURQ03405 335 aa9.25□□□□□ -0.93
NPM1-212ENST00000524204 RNF114Q9Y508 228 aa9.25□□□□□ -0.93
NPM1-212ENST00000524204 GTF2IP78347 998 aa9.24□□□□□ -0.93
NPM1-212ENST00000524204 C1orf53Q5VUE5 145 aa9.23□□□□□ -0.93
NPM1-212ENST00000524204 IGF2-ASQ6U949 168 aa9.23□□□□□ -0.93
NPM1-212ENST00000524204 DZIP1LQ8IYY4 767 aaKnown RBP9.23□□□□□ -0.93
NPM1-212ENST00000524204 PHACTR1Q9C0D0 580 aa9.23□□□□□ -0.93
NPM1-212ENST00000524204 ANKIB1Q9P2G1 1089 aa9.23□□□□□ -0.93
NPM1-212ENST00000524204 ADAMTS4O75173 837 aa9.22□□□□□ -0.93
NPM1-212ENST00000524204 ALX3O95076 343 aa9.22□□□□□ -0.93
NPM1-212ENST00000524204 DTWD1Q8N5C7 304 aa9.22□□□□□ -0.93
NPM1-212ENST00000524204 DEAF1O75398 565 aaPredicted RBP9.21□□□□□ -0.94
NPM1-212ENST00000524204 GP2P55259 537 aaKnown RBP9.21□□□□□ -0.94
NPM1-212ENST00000524204 POTEAQ6S8J7 498 aa9.21□□□□□ -0.94
NPM1-212ENST00000524204 GSX2Q9BZM3 304 aa9.21□□□□□ -0.94
NPM1-212ENST00000524204 BRPF1P55201 1214 aaPredicted RBP9.2□□□□□ -0.94
NPM1-212ENST00000524204 PSME1Q06323 249 aa9.2□□□□□ -0.94
NPM1-212ENST00000524204 EML3Q32P44 896 aa9.2□□□□□ -0.94
NPM1-212ENST00000524204 SLC51AQ86UW1 340 aa9.2□□□□□ -0.94
NPM1-212ENST00000524204 LPIN3Q9BQK8 851 aa9.2□□□□□ -0.94
NPM1-212ENST00000524204 NOD1Q9Y239 953 aa9.2□□□□□ -0.94
NPM1-212ENST00000524204 CPB1P15086 417 aa9.19□□□□□ -0.94
NPM1-212ENST00000524204 SEMA3FQ13275 785 aa9.19□□□□□ -0.94
NPM1-212ENST00000524204 BTLAQ7Z6A9 289 aa9.19□□□□□ -0.94
NPM1-212ENST00000524204 FAM35AQ86V20 835 aa9.19□□□□□ -0.94
NPM1-212ENST00000524204 HOMEZQ8IX15 550 aa9.19□□□□□ -0.94
NPM1-212ENST00000524204 KRTAP4-2Q9BYR5 136 aa9.19□□□□□ -0.94
NPM1-212ENST00000524204 TSPAN10Q9H1Z9 355 aaPredicted RBP9.19□□□□□ -0.94
NPM1-212ENST00000524204 KIAA1324LA8MWY0 1029 aaPredicted RBP9.18□□□□□ -0.94
NPM1-212ENST00000524204 HIRAP54198 1017 aaPredicted RBP9.18□□□□□ -0.94
NPM1-212ENST00000524204 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.18□□□□□ -0.94
NPM1-212ENST00000524204 ZBTB42B2RXF5 422 aa9.17□□□□□ -0.94
NPM1-212ENST00000524204 DLL1O00548 723 aa9.17□□□□□ -0.94
NPM1-212ENST00000524204 TGFB1P01137 390 aa9.17□□□□□ -0.94
NPM1-212ENST00000524204 NFKB1P19838 968 aa9.17□□□□□ -0.94
NPM1-212ENST00000524204 PSMA6P60900 246 aaKnown RBP9.17□□□□□ -0.94
NPM1-212ENST00000524204 PERM1Q5SV97 790 aa9.17□□□□□ -0.94
NPM1-212ENST00000524204 GDPD2Q9HCC8 539 aa9.17□□□□□ -0.94
NPM1-212ENST00000524204 AKTIPQ9H8T0 292 aa9.16□□□□□ -0.94
NPM1-212ENST00000524204 SKIP12755 728 aa9.15□□□□□ -0.94
NPM1-212ENST00000524204 NCOA4Q13772 614 aa9.15□□□□□ -0.94
NPM1-212ENST00000524204 NEUROD2Q15784 382 aa9.15□□□□□ -0.94
NPM1-212ENST00000524204 WFDC8Q8IUA0 241 aa9.15□□□□□ -0.94
NPM1-212ENST00000524204 EFCC1Q9HA90 598 aa9.15□□□□□ -0.94
NPM1-212ENST00000524204 ZBTB7BO15156 539 aaPredicted RBP9.14□□□□□ -0.95
NPM1-212ENST00000524204 GRNP28799 593 aaKnown RBP9.14□□□□□ -0.95
NPM1-212ENST00000524204 ABL2P42684 1182 aa9.14□□□□□ -0.95
NPM1-212ENST00000524204 PRM3Q9NNZ6 103 aa9.14□□□□□ -0.95
NPM1-212ENST00000524204 FRRS1LQ9P0K9 344 aa9.14□□□□□ -0.95
NPM1-212ENST00000524204 KIAA1024Q9UPX6 916 aa9.14□□□□□ -0.95
NPM1-212ENST00000524204 CCINQ13939 588 aa9.13□□□□□ -0.95
NPM1-212ENST00000524204 DEPDC4Q8N2C3 294 aa9.13□□□□□ -0.95
NPM1-212ENST00000524204 PNMA5Q96PV4 448 aa9.13□□□□□ -0.95
NPM1-212ENST00000524204 F8W735 103 aaPredicted RBP9.12□□□□□ -0.95
NPM1-212ENST00000524204 ALDH16A1Q8IZ83 802 aa9.12□□□□□ -0.95
NPM1-212ENST00000524204 IGLV1-40P01703 118 aa9.11□□□□□ -0.95
NPM1-212ENST00000524204 MLLT1Q03111 559 aaPredicted RBP9.11□□□□□ -0.95
NPM1-212ENST00000524204 WASHC4Q2M389 1173 aa9.11□□□□□ -0.95
NPM1-212ENST00000524204 TMEM130Q8N3G9 435 aa9.11□□□□□ -0.95
NPM1-212ENST00000524204 ZFATQ9P243 1243 aa9.11□□□□□ -0.95
NPM1-212ENST00000524204 C21orf2O43822 256 aa9.1□□□□□ -0.95
NPM1-212ENST00000524204 ELMSAN1Q6PJG2 1045 aa9.1□□□□□ -0.95
NPM1-212ENST00000524204 RAXQ9Y2V3 346 aa9.1□□□□□ -0.95
NPM1-212ENST00000524204 LZTS3O60299 673 aaPredicted RBP9.09□□□□□ -0.95
NPM1-212ENST00000524204 SPINK2P20155 84 aa9.09□□□□□ -0.95
NPM1-212ENST00000524204 SOX11P35716 441 aa9.09□□□□□ -0.95
NPM1-212ENST00000524204 JAG1P78504 1218 aa9.09□□□□□ -0.95
NPM1-212ENST00000524204 AGGF1Q8N302 714 aaeCLIP9.09□□□□□ -0.95
NPM1-212ENST00000524204 TPCN2Q8NHX9 752 aa9.09□□□□□ -0.95
NPM1-212ENST00000524204 TTC9Q92623 222 aa9.09□□□□□ -0.95
NPM1-212ENST00000524204 Q6ZS46 218 aa9.08□□□□□ -0.96
NPM1-212ENST00000524204 ZDHHC13Q8IUH4 622 aa9.08□□□□□ -0.96
NPM1-212ENST00000524204 TRPM4Q8TD43 1214 aa9.08□□□□□ -0.96
NPM1-212ENST00000524204 DMGDHQ9UI17 866 aaKnown RBP9.08□□□□□ -0.96
NPM1-212ENST00000524204 BCS1LQ9Y276 419 aa9.08□□□□□ -0.96
NPM1-212ENST00000524204 CHMP3Q9Y3E7 222 aa9.08□□□□□ -0.96
NPM1-212ENST00000524204 UBL7Q96S82 380 aaPredicted RBP9.07□□□□□ -0.96
NPM1-212ENST00000524204 MRPL18Q9H0U6 180 aaKnown RBP9.07□□□□□ -0.96
NPM1-212ENST00000524204 SMG9Q9H0W8 520 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms