RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 SIK1P57059 783 aa27.36■■□□□ 1.97
NKX6-3-202ENST00000524115 BEND3Q5T5X7 828 aa27.36■■□□□ 1.97
NKX6-3-202ENST00000524115 KDM6AO15550 1401 aaPredicted RBP27.35■■□□□ 1.97
NKX6-3-202ENST00000524115 CABP4P57796 275 aa27.35■■□□□ 1.97
NKX6-3-202ENST00000524115 SLC16A10Q8TF71 515 aa27.35■■□□□ 1.97
NKX6-3-202ENST00000524115 SGIP1Q9BQI5 828 aa27.34■■□□□ 1.97
NKX6-3-202ENST00000524115 CHPF2Q9P2E5 772 aa27.34■■□□□ 1.97
NKX6-3-202ENST00000524115 CHMLP26374 656 aa27.33■■□□□ 1.97
NKX6-3-202ENST00000524115 PPP1R42Q7Z4L9 355 aa27.33■■□□□ 1.97
NKX6-3-202ENST00000524115 HEG1Q9ULI3 1381 aa27.33■■□□□ 1.97
NKX6-3-202ENST00000524115 FAM43AQ8N2R8 423 aa27.33■■□□□ 1.97
NKX6-3-202ENST00000524115 TRIM6-TRIM34B2RNG4 842 aa27.32■■□□□ 1.96
NKX6-3-202ENST00000524115 SURF6O75683 361 aaKnown RBP27.32■■□□□ 1.96
NKX6-3-202ENST00000524115 MTX1Q13505 466 aa27.32■■□□□ 1.96
NKX6-3-202ENST00000524115 COL23A1Q86Y22 540 aaPredicted RBP27.31■■□□□ 1.96
NKX6-3-202ENST00000524115 HYPKQ9NX55 129 aa27.31■■□□□ 1.96
NKX6-3-202ENST00000524115 PI4KAP2A4QPH2 592 aa27.3■■□□□ 1.96
NKX6-3-202ENST00000524115 PI4KAP1Q8N8J0 262 aa27.3■■□□□ 1.96
NKX6-3-202ENST00000524115 NFATC2IPQ8NCF5 419 aa27.3■■□□□ 1.96
NKX6-3-202ENST00000524115 RHPN1Q8TCX5 695 aa27.3■■□□□ 1.96
NKX6-3-202ENST00000524115 ITGB4P16144 1822 aa27.3■■□□□ 1.96
NKX6-3-202ENST00000524115 ADAMTS7Q9UKP4 1686 aa27.3■■□□□ 1.96
NKX6-3-202ENST00000524115 ATP6V1AP38606 617 aa27.3■■□□□ 1.96
NKX6-3-202ENST00000524115 RILPL2Q969X0 211 aa27.3■■□□□ 1.96
NKX6-3-202ENST00000524115 FOXD4L1Q9NU39 408 aa27.3■■□□□ 1.96
NKX6-3-202ENST00000524115 SRGAP3O43295 1099 aa27.29■■□□□ 1.96
NKX6-3-202ENST00000524115 DDX58O95786 925 aaKnown RBP27.29■■□□□ 1.96
NKX6-3-202ENST00000524115 CYP2E1P05181 493 aaPredicted RBP27.29■■□□□ 1.96
NKX6-3-202ENST00000524115 SSFA2P28290 1259 aa27.29■■□□□ 1.96
NKX6-3-202ENST00000524115 ITPK1Q13572 414 aa27.29■■□□□ 1.96
NKX6-3-202ENST00000524115 ERC1Q8IUD2 1116 aa27.29■■□□□ 1.96
NKX6-3-202ENST00000524115 USP42Q9H9J4 1324 aaKnown RBP27.28■■□□□ 1.96
NKX6-3-202ENST00000524115 BAG4O95429 457 aaKnown RBP27.28■■□□□ 1.96
NKX6-3-202ENST00000524115 KSR2Q6VAB6 950 aa27.28■■□□□ 1.96
NKX6-3-202ENST00000524115 LINC00116Q8NCU8 138 aa27.28■■□□□ 1.96
NKX6-3-202ENST00000524115 GZF1Q9H116 711 aaPredicted RBP27.28■■□□□ 1.96
NKX6-3-202ENST00000524115 TTC41PQ6P2S7 1318 aa27.28■■□□□ 1.96
NKX6-3-202ENST00000524115 GIGYF1O75420 1035 aaPredicted RBP27.27■■□□□ 1.96
NKX6-3-202ENST00000524115 AK7Q96M32 723 aa27.27■■□□□ 1.96
NKX6-3-202ENST00000524115 ADCY9O60503 1353 aa27.27■■□□□ 1.96
NKX6-3-202ENST00000524115 XRCC6P12956 609 aaKnown RBP eCLIP27.26■■□□□ 1.95
NKX6-3-202ENST00000524115 CNTROBQ8N137 903 aa27.26■■□□□ 1.95
NKX6-3-202ENST00000524115 FLAD1Q8NFF5 587 aa27.26■■□□□ 1.95
NKX6-3-202ENST00000524115 SLC4A9Q96Q91 983 aa27.26■■□□□ 1.95
NKX6-3-202ENST00000524115 ARXQ96QS3 562 aa27.26■■□□□ 1.95
NKX6-3-202ENST00000524115 KLHL40Q2TBA0 621 aa27.25■■□□□ 1.95
NKX6-3-202ENST00000524115 AMIGO3Q86WK7 504 aa27.24■■□□□ 1.95
NKX6-3-202ENST00000524115 INTS4Q96HW7 963 aaKnown RBP27.24■■□□□ 1.95
NKX6-3-202ENST00000524115 ANO2Q9NQ90 1003 aa27.24■■□□□ 1.95
NKX6-3-202ENST00000524115 SIPA1L3O60292 1781 aaPredicted RBP27.24■■□□□ 1.95
NKX6-3-202ENST00000524115 KCNQ3O43525 872 aa27.24■■□□□ 1.95
NKX6-3-202ENST00000524115 GPATCH3Q96I76 525 aa27.24■■□□□ 1.95
NKX6-3-202ENST00000524115 POLD1P28340 1107 aa27.23■■□□□ 1.95
NKX6-3-202ENST00000524115 NEK4P51957 841 aa27.23■■□□□ 1.95
NKX6-3-202ENST00000524115 FHDC1Q9C0D6 1143 aaPredicted RBP27.23■■□□□ 1.95
NKX6-3-202ENST00000524115 SLC52A2Q9HAB3 445 aa27.23■■□□□ 1.95
NKX6-3-202ENST00000524115 NBPF7P0C2Y1 421 aaPredicted RBP27.22■■□□□ 1.95
NKX6-3-202ENST00000524115 SMIM5Q71RC9 77 aa27.22■■□□□ 1.95
NKX6-3-202ENST00000524115 GRPEL1Q9HAV7 217 aa27.22■■□□□ 1.95
NKX6-3-202ENST00000524115 DDX21Q9NR30 783 aaKnown RBP eCLIP27.22■■□□□ 1.95
NKX6-3-202ENST00000524115 C9orf78Q9NZ63 289 aaPredicted RBP27.22■■□□□ 1.95
NKX6-3-202ENST00000524115 GLRX3O76003 335 aaKnown RBP27.21■■□□□ 1.95
NKX6-3-202ENST00000524115 CUL4AQ13619 759 aa27.21■■□□□ 1.95
NKX6-3-202ENST00000524115 LINS1Q8NG48 757 aa27.21■■□□□ 1.95
NKX6-3-202ENST00000524115 SYT17Q9BSW7 474 aa27.21■■□□□ 1.95
NKX6-3-202ENST00000524115 IL1RAPL2Q9NP60 686 aa27.21■■□□□ 1.95
NKX6-3-202ENST00000524115 PTCD1O75127 700 aaKnown RBP27.21■■□□□ 1.95
NKX6-3-202ENST00000524115 CLASRPQ8N2M8 674 aaKnown RBP27.21■■□□□ 1.95
NKX6-3-202ENST00000524115 C5P01031 1676 aa27.2■■□□□ 1.95
NKX6-3-202ENST00000524115 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.2■■□□□ 1.94
NKX6-3-202ENST00000524115 PHF14O94880 888 aa27.2■■□□□ 1.94
NKX6-3-202ENST00000524115 PI4K2BQ8TCG2 481 aa27.2■■□□□ 1.94
NKX6-3-202ENST00000524115 RUFY2Q8WXA3 655 aa27.2■■□□□ 1.94
NKX6-3-202ENST00000524115 MAP3K2Q9Y2U5 619 aa27.2■■□□□ 1.94
NKX6-3-202ENST00000524115 UTYO14607 1347 aa27.2■■□□□ 1.94
NKX6-3-202ENST00000524115 GNPATO15228 680 aa27.19■■□□□ 1.94
NKX6-3-202ENST00000524115 OS9Q13438 667 aaPredicted RBP27.19■■□□□ 1.94
NKX6-3-202ENST00000524115 TSHZ3Q63HK5 1081 aa27.19■■□□□ 1.94
NKX6-3-202ENST00000524115 QSER1Q2KHR3 1735 aa27.19■■□□□ 1.94
NKX6-3-202ENST00000524115 HSPA4P34932 840 aa27.18■■□□□ 1.94
NKX6-3-202ENST00000524115 MSL1Q68DK7 614 aa27.18■■□□□ 1.94
NKX6-3-202ENST00000524115 NUTM1Q86Y26 1132 aa27.18■■□□□ 1.94
NKX6-3-202ENST00000524115 C4BP0C0L5 1744 aa27.18■■□□□ 1.94
NKX6-3-202ENST00000524115 TMX3Q96JJ7 454 aa27.17■■□□□ 1.94
NKX6-3-202ENST00000524115 DDX49Q9Y6V7 483 aaKnown RBP27.17■■□□□ 1.94
NKX6-3-202ENST00000524115 KIAA1211Q6ZU35 1233 aa27.16■■□□□ 1.94
NKX6-3-202ENST00000524115 SGSM2O43147 1006 aa27.15■■□□□ 1.94
NKX6-3-202ENST00000524115 RC3H1Q5TC82 1133 aaKnown RBP27.14■■□□□ 1.94
NKX6-3-202ENST00000524115 RAD50Q92878 1312 aa27.14■■□□□ 1.93
NKX6-3-202ENST00000524115 SLC39A6Q13433 755 aa27.14■■□□□ 1.93
NKX6-3-202ENST00000524115 TAF1LQ8IZX4 1826 aa27.13■■□□□ 1.93
NKX6-3-202ENST00000524115 GRM8O00222 908 aa27.13■■□□□ 1.93
NKX6-3-202ENST00000524115 HIP1O00291 1037 aa27.13■■□□□ 1.93
NKX6-3-202ENST00000524115 MCTP1Q6DN14 999 aa27.13■■□□□ 1.93
NKX6-3-202ENST00000524115 ECHDC1Q9NTX5 307 aa27.13■■□□□ 1.93
NKX6-3-202ENST00000524115 RTCBQ9Y3I0 505 aaKnown RBP27.13■■□□□ 1.93
NKX6-3-202ENST00000524115 AK9Q5TCS8 1911 aa27.12■■□□□ 1.93
NKX6-3-202ENST00000524115 DCAF8L1A6NGE4 600 aa27.12■■□□□ 1.93
NKX6-3-202ENST00000524115 NEXNQ0ZGT2 675 aa27.12■■□□□ 1.93
NKX6-3-202ENST00000524115 RTN4Q9NQC3 1192 aaKnown RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 227.4 ms