RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 KCNC4Q03721 635 aa12.66□□□□□ -0.38
PFDN1-207ENST00000524074 MEI1Q5TIA1 1274 aa12.66□□□□□ -0.38
PFDN1-207ENST00000524074 PI16Q6UXB8 463 aa12.66□□□□□ -0.38
PFDN1-207ENST00000524074 OSBPL7Q9BZF2 842 aa12.66□□□□□ -0.38
PFDN1-207ENST00000524074 TBX22Q9Y458 520 aa12.66□□□□□ -0.38
PFDN1-207ENST00000524074 ST13P50502 369 aaKnown RBP12.65□□□□□ -0.38
PFDN1-207ENST00000524074 RHPN1Q8TCX5 695 aa12.65□□□□□ -0.38
PFDN1-207ENST00000524074 RHBDD1Q8TEB9 315 aa12.65□□□□□ -0.38
PFDN1-207ENST00000524074 SNX29Q8TEQ0 813 aa12.65□□□□□ -0.38
PFDN1-207ENST00000524074 TGFBR3LH3BV60 316 aa12.64□□□□□ -0.39
PFDN1-207ENST00000524074 TNFRSF21O75509 655 aa12.64□□□□□ -0.39
PFDN1-207ENST00000524074 USP17L7P0C7H9 530 aa12.64□□□□□ -0.39
PFDN1-207ENST00000524074 PAK2Q13177 524 aa12.64□□□□□ -0.39
PFDN1-207ENST00000524074 USPL1Q5W0Q7 1092 aa12.64□□□□□ -0.39
PFDN1-207ENST00000524074 KDF1Q8NAX2 398 aaPredicted RBP12.64□□□□□ -0.39
PFDN1-207ENST00000524074 EPS8L3Q8TE67 593 aaKnown RBP12.64□□□□□ -0.39
PFDN1-207ENST00000524074 FOXD3Q9UJU5 478 aaPredicted RBP12.64□□□□□ -0.39
PFDN1-207ENST00000524074 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.64□□□□□ -0.39
PFDN1-207ENST00000524074 BCS1LQ9Y276 419 aa12.64□□□□□ -0.39
PFDN1-207ENST00000524074 ATF4P18848 351 aaPredicted RBP12.63□□□□□ -0.39
PFDN1-207ENST00000524074 TXLNAP40222 546 aa12.63□□□□□ -0.39
PFDN1-207ENST00000524074 PTGIRP43119 386 aa12.63□□□□□ -0.39
PFDN1-207ENST00000524074 GPRASP2Q96D09 838 aa12.63□□□□□ -0.39
PFDN1-207ENST00000524074 SRCIN1Q9C0H9 1055 aa12.63□□□□□ -0.39
PFDN1-207ENST00000524074 FNDC3AQ9Y2H6 1198 aaKnown RBP12.63□□□□□ -0.39
PFDN1-207ENST00000524074 V9GY48 417 aaPredicted RBP12.63□□□□□ -0.39
PFDN1-207ENST00000524074 IRS1P35568 1242 aa12.62□□□□□ -0.39
PFDN1-207ENST00000524074 CBLBQ13191 982 aa12.62□□□□□ -0.39
PFDN1-207ENST00000524074 BMS1Q14692 1282 aaKnown RBP12.62□□□□□ -0.39
PFDN1-207ENST00000524074 ZNF438Q7Z4V0 828 aa12.62□□□□□ -0.39
PFDN1-207ENST00000524074 GNASQ5JWF2 1037 aa12.61□□□□□ -0.39
PFDN1-207ENST00000524074 SBNO2Q9Y2G9 1366 aa12.6□□□□□ -0.39
PFDN1-207ENST00000524074 PLA2G4AP47712 749 aa12.6□□□□□ -0.39
PFDN1-207ENST00000524074 NFE2L2Q16236 605 aa12.6□□□□□ -0.39
PFDN1-207ENST00000524074 EGFLAMQ63HQ2 1017 aa12.6□□□□□ -0.39
PFDN1-207ENST00000524074 ERMP1Q7Z2K6 904 aa12.6□□□□□ -0.39
PFDN1-207ENST00000524074 CKAP2LQ8IYA6 745 aa12.6□□□□□ -0.39
PFDN1-207ENST00000524074 KRTAP3-3Q9BYR6 98 aa12.6□□□□□ -0.39
PFDN1-207ENST00000524074 KRTAP3-2Q9BYR7 98 aa12.6□□□□□ -0.39
PFDN1-207ENST00000524074 PHACTR2O75167 634 aa12.59□□□□□ -0.39
PFDN1-207ENST00000524074 NNTQ13423 1086 aa12.59□□□□□ -0.39
PFDN1-207ENST00000524074 NBPF1Q3BBV0 1214 aa12.59□□□□□ -0.39
PFDN1-207ENST00000524074 ZNF746Q6NUN9 644 aaPredicted RBP12.59□□□□□ -0.39
PFDN1-207ENST00000524074 XKR5Q6UX68 686 aa12.59□□□□□ -0.39
PFDN1-207ENST00000524074 ZFYVE28Q9HCC9 887 aa12.59□□□□□ -0.39
PFDN1-207ENST00000524074 WNT7AO00755 349 aa12.58□□□□□ -0.4
PFDN1-207ENST00000524074 IDH3AP50213 366 aa12.58□□□□□ -0.4
PFDN1-207ENST00000524074 PDE12Q6L8Q7 609 aaKnown RBP12.58□□□□□ -0.4
PFDN1-207ENST00000524074 NBPF10Q6P3W6 841 aaKnown RBP12.58□□□□□ -0.4
PFDN1-207ENST00000524074 NLGN1Q8N2Q7 840 aa12.58□□□□□ -0.4
PFDN1-207ENST00000524074 MRFAP1L1Q96HT8 127 aa12.58□□□□□ -0.4
PFDN1-207ENST00000524074 MRGPRX2Q96LB1 330 aa12.58□□□□□ -0.4
PFDN1-207ENST00000524074 AGBL1Q96MI9 1066 aa12.58□□□□□ -0.4
PFDN1-207ENST00000524074 NPHS2Q9NP85 383 aa12.58□□□□□ -0.4
PFDN1-207ENST00000524074 RELBQ01201 579 aa12.57□□□□□ -0.4
PFDN1-207ENST00000524074 IER5Q5VY09 327 aa12.57□□□□□ -0.4
PFDN1-207ENST00000524074 Q6ZVU0 165 aa12.57□□□□□ -0.4
PFDN1-207ENST00000524074 NEUROD4Q9HD90 331 aa12.57□□□□□ -0.4
PFDN1-207ENST00000524074 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.57□□□□□ -0.4
PFDN1-207ENST00000524074 GADD45BO75293 160 aaPredicted RBP12.56□□□□□ -0.4
PFDN1-207ENST00000524074 CLSTN1O94985 981 aa12.56□□□□□ -0.4
PFDN1-207ENST00000524074 ARSDP51689 593 aa12.56□□□□□ -0.4
PFDN1-207ENST00000524074 NXPE4Q6UWF7 544 aa12.56□□□□□ -0.4
PFDN1-207ENST00000524074 AIDAQ96BJ3 306 aa12.56□□□□□ -0.4
PFDN1-207ENST00000524074 SUSD3Q96L08 255 aa12.56□□□□□ -0.4
PFDN1-207ENST00000524074 CHMP4AQ9BY43 222 aa12.56□□□□□ -0.4
PFDN1-207ENST00000524074 COPRSQ9NQ92 184 aa12.56□□□□□ -0.4
PFDN1-207ENST00000524074 WASF2Q9Y6W5 498 aa12.56□□□□□ -0.4
PFDN1-207ENST00000524074 UBAP1LF5GYI3 381 aa12.55□□□□□ -0.4
PFDN1-207ENST00000524074 SSBP05455 408 aaKnown RBP eCLIP12.55□□□□□ -0.4
PFDN1-207ENST00000524074 SLC27A3Q5K4L6 730 aa12.55□□□□□ -0.4
PFDN1-207ENST00000524074 LCE2DQ5TA82 110 aaPredicted RBP12.55□□□□□ -0.4
PFDN1-207ENST00000524074 JAZF1Q86VZ6 243 aa12.55□□□□□ -0.4
PFDN1-207ENST00000524074 RASGRP4Q8TDF6 673 aa12.55□□□□□ -0.4
PFDN1-207ENST00000524074 BCO2Q9BYV7 579 aa12.55□□□□□ -0.4
PFDN1-207ENST00000524074 ZDHHC3Q9NYG2 299 aa12.55□□□□□ -0.4
PFDN1-207ENST00000524074 GPC6Q9Y625 555 aaPredicted RBP12.55□□□□□ -0.4
PFDN1-207ENST00000524074 ITGBL1O95965 494 aaPredicted RBP12.54□□□□□ -0.4
PFDN1-207ENST00000524074 TATP17735 454 aaPredicted RBP12.54□□□□□ -0.4
PFDN1-207ENST00000524074 NBPF6Q5VWK0 638 aa12.54□□□□□ -0.4
PFDN1-207ENST00000524074 CMTR1Q8N1G2 835 aaKnown RBP12.54□□□□□ -0.4
PFDN1-207ENST00000524074 NBPF4Q96M43 638 aa12.54□□□□□ -0.4
PFDN1-207ENST00000524074 SPON2Q9BUD6 331 aa12.54□□□□□ -0.4
PFDN1-207ENST00000524074 KBTBD4Q9NVX7 518 aa12.54□□□□□ -0.4
PFDN1-207ENST00000524074 ALDH1A1P00352 501 aa12.53□□□□□ -0.4
PFDN1-207ENST00000524074 C4orf17Q53FE4 359 aa12.53□□□□□ -0.4
PFDN1-207ENST00000524074 LIAT1Q6ZQX7 453 aa12.53□□□□□ -0.4
PFDN1-207ENST00000524074 SEC16BQ96JE7 1060 aa12.53□□□□□ -0.4
PFDN1-207ENST00000524074 ZNF395Q9H8N7 513 aaPredicted RBP12.53□□□□□ -0.4
PFDN1-207ENST00000524074 ELP3Q9H9T3 547 aa12.53□□□□□ -0.4
PFDN1-207ENST00000524074 ANKIB1Q9P2G1 1089 aa12.53□□□□□ -0.4
PFDN1-207ENST00000524074 DMGDHQ9UI17 866 aaKnown RBP12.53□□□□□ -0.4
PFDN1-207ENST00000524074 TTF2Q9UNY4 1162 aaKnown RBP12.53□□□□□ -0.4
PFDN1-207ENST00000524074 USP20Q9Y2K6 914 aa12.53□□□□□ -0.4
PFDN1-207ENST00000524074 RTCBQ9Y3I0 505 aaKnown RBP12.53□□□□□ -0.4
PFDN1-207ENST00000524074 K7ELQ4 463 aaPredicted RBP12.52□□□□□ -0.41
PFDN1-207ENST00000524074 POLR3DP05423 398 aaPredicted RBP12.52□□□□□ -0.41
PFDN1-207ENST00000524074 KIAA0825Q8IV33 1275 aa12.52□□□□□ -0.41
PFDN1-207ENST00000524074 ZNF280CQ8ND82 737 aa12.52□□□□□ -0.41
PFDN1-207ENST00000524074 ITPKCQ96DU7 683 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms