RNA–Protein interactions for RNA: ENST00000522959.5

ARFGAP1-216, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 556 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-216ENST00000522959 RIC1Q4ADV7 1423 aa20.26■□□□□ 0.83
ARFGAP1-216ENST00000522959 HDGFL1Q5TGJ6 251 aa20.25■□□□□ 0.83
ARFGAP1-216ENST00000522959 C8orf58Q8NAV2 365 aa20.25■□□□□ 0.83
ARFGAP1-216ENST00000522959 COL4A5P29400 1685 aa20.25■□□□□ 0.83
ARFGAP1-216ENST00000522959 ELL2O00472 640 aaPredicted RBP20.24■□□□□ 0.83
ARFGAP1-216ENST00000522959 NLRP10Q86W26 655 aa20.24■□□□□ 0.83
ARFGAP1-216ENST00000522959 TAOK3Q9H2K8 898 aa20.24■□□□□ 0.83
ARFGAP1-216ENST00000522959 KDM2BQ8NHM5 1336 aa20.24■□□□□ 0.83
ARFGAP1-216ENST00000522959 ZC3H4Q9UPT8 1303 aaKnown RBP20.24■□□□□ 0.83
ARFGAP1-216ENST00000522959 COL4A1P02462 1669 aa20.23■□□□□ 0.83
ARFGAP1-216ENST00000522959 HOXA10P31260 410 aaPredicted RBP20.23■□□□□ 0.83
ARFGAP1-216ENST00000522959 TCIRG1Q13488 830 aa20.23■□□□□ 0.83
ARFGAP1-216ENST00000522959 SLC10A5Q5PT55 438 aa20.23■□□□□ 0.83
ARFGAP1-216ENST00000522959 TSPYL6Q8N831 410 aa20.23■□□□□ 0.83
ARFGAP1-216ENST00000522959 IFT57Q9NWB7 429 aa20.23■□□□□ 0.83
ARFGAP1-216ENST00000522959 PCNTO95613 3336 aa20.23■□□□□ 0.83
ARFGAP1-216ENST00000522959 HOXB7P09629 217 aa20.22■□□□□ 0.83
ARFGAP1-216ENST00000522959 PHAXQ9H814 394 aaKnown RBP20.22■□□□□ 0.83
ARFGAP1-216ENST00000522959 PARP10Q53GL7 1025 aa20.21■□□□□ 0.83
ARFGAP1-216ENST00000522959 CCDC93Q567U6 631 aa20.21■□□□□ 0.83
ARFGAP1-216ENST00000522959 PPP1R42Q7Z4L9 355 aa20.21■□□□□ 0.83
ARFGAP1-216ENST00000522959 UTP14AQ9BVJ6 771 aaKnown RBP20.21■□□□□ 0.83
ARFGAP1-216ENST00000522959 ZNF277Q9NRM2 450 aaPredicted RBP20.21■□□□□ 0.83
ARFGAP1-216ENST00000522959 HCLS1P14317 486 aaPredicted RBP20.2■□□□□ 0.82
ARFGAP1-216ENST00000522959 ALDH1B1P30837 517 aa20.2■□□□□ 0.82
ARFGAP1-216ENST00000522959 GNAI1P63096 354 aa20.2■□□□□ 0.82
ARFGAP1-216ENST00000522959 FKBP4Q02790 459 aaKnown RBP eCLIP20.2■□□□□ 0.82
ARFGAP1-216ENST00000522959 RBM46Q8TBY0 533 aaKnown RBP20.2■□□□□ 0.82
ARFGAP1-216ENST00000522959 DDNO94850 711 aaPredicted RBP20.19■□□□□ 0.82
ARFGAP1-216ENST00000522959 ANKRD13DQ6ZTN6 518 aa20.19■□□□□ 0.82
ARFGAP1-216ENST00000522959 WWC1Q8IX03 1113 aa20.19■□□□□ 0.82
ARFGAP1-216ENST00000522959 TSR2Q969E8 191 aaKnown RBP20.19■□□□□ 0.82
ARFGAP1-216ENST00000522959 ISCA1Q9BUE6 129 aa20.19■□□□□ 0.82
ARFGAP1-216ENST00000522959 DBF4Q9UBU7 674 aaPredicted RBP20.19■□□□□ 0.82
ARFGAP1-216ENST00000522959 ATP5J2-PTCD1G3V325 749 aa20.18■□□□□ 0.82
ARFGAP1-216ENST00000522959 TCERG1O14776 1098 aaKnown RBP20.18■□□□□ 0.82
ARFGAP1-216ENST00000522959 HTRA3P83110 453 aa20.18■□□□□ 0.82
ARFGAP1-216ENST00000522959 SOGA3Q5TF21 947 aa20.18■□□□□ 0.82
ARFGAP1-216ENST00000522959 PLBD2Q8NHP8 589 aa20.18■□□□□ 0.82
ARFGAP1-216ENST00000522959 MRS2Q9HD23 443 aa20.18■□□□□ 0.82
ARFGAP1-216ENST00000522959 RPGRQ92834 1020 aaKnown RBP20.17■□□□□ 0.82
ARFGAP1-216ENST00000522959 CRAMP1Q96RY5 1269 aa20.17■□□□□ 0.82
ARFGAP1-216ENST00000522959 POTEIP0CG38 1075 aa20.16■□□□□ 0.82
ARFGAP1-216ENST00000522959 POTEJP0CG39 1038 aa20.16■□□□□ 0.82
ARFGAP1-216ENST00000522959 VEGFAP15692 232 aaPredicted RBP20.16■□□□□ 0.82
ARFGAP1-216ENST00000522959 DNAJC5GQ8N7S2 189 aa20.16■□□□□ 0.82
ARFGAP1-216ENST00000522959 HYPKQ9NX55 129 aa20.16■□□□□ 0.82
ARFGAP1-216ENST00000522959 TRMT112Q9UI30 125 aaKnown RBP20.16■□□□□ 0.82
ARFGAP1-216ENST00000522959 ZNF541Q9H0D2 1346 aa20.16■□□□□ 0.82
ARFGAP1-216ENST00000522959 ANP32CO43423 234 aa20.15■□□□□ 0.82
ARFGAP1-216ENST00000522959 CCDC27Q2M243 656 aa20.15■□□□□ 0.82
ARFGAP1-216ENST00000522959 HSP90AB3PQ58FF7 597 aa20.15■□□□□ 0.82
ARFGAP1-216ENST00000522959 RTKN2Q8IZC4 609 aa20.15■□□□□ 0.82
ARFGAP1-216ENST00000522959 RBM17Q96I25 401 aaKnown RBP20.15■□□□□ 0.82
ARFGAP1-216ENST00000522959 NLRP3Q96P20 1036 aa20.15■□□□□ 0.82
ARFGAP1-216ENST00000522959 ABCC4O15439 1325 aa20.15■□□□□ 0.82
ARFGAP1-216ENST00000522959 SCN4AP35499 1836 aa20.15■□□□□ 0.82
ARFGAP1-216ENST00000522959 IARSP41252 1262 aaKnown RBP20.14■□□□□ 0.81
ARFGAP1-216ENST00000522959 C16orf71Q8IYS4 520 aaPredicted RBP20.14■□□□□ 0.81
ARFGAP1-216ENST00000522959 FAM89AQ96GI7 184 aa20.14■□□□□ 0.81
ARFGAP1-216ENST00000522959 LTBP1Q14766 1721 aa20.13■□□□□ 0.81
ARFGAP1-216ENST00000522959 PPEF1O14829 653 aaPredicted RBP20.13■□□□□ 0.81
ARFGAP1-216ENST00000522959 DPY19L2Q6NUT2 758 aa20.13■□□□□ 0.81
ARFGAP1-216ENST00000522959 PSMD1Q99460 953 aa20.13■□□□□ 0.81
ARFGAP1-216ENST00000522959 SALL2Q9Y467 1007 aaPredicted RBP20.13■□□□□ 0.81
ARFGAP1-216ENST00000522959 FZD9O00144 591 aa20.12■□□□□ 0.81
ARFGAP1-216ENST00000522959 CALD1Q05682 793 aaKnown RBP20.12■□□□□ 0.81
ARFGAP1-216ENST00000522959 FSTL1Q12841 308 aa20.12■□□□□ 0.81
ARFGAP1-216ENST00000522959 RTL5Q5HYW3 569 aaPredicted RBP20.12■□□□□ 0.81
ARFGAP1-216ENST00000522959 SPINK5Q9NQ38 1064 aaPredicted RBP20.12■□□□□ 0.81
ARFGAP1-216ENST00000522959 LRRC37AA6NMS7 1700 aa20.11■□□□□ 0.81
ARFGAP1-216ENST00000522959 SH3TC1Q8TE82 1336 aa20.11■□□□□ 0.81
ARFGAP1-216ENST00000522959 CACNA1FO60840 1977 aa20.11■□□□□ 0.81
ARFGAP1-216ENST00000522959 RNF123Q5XPI4 1314 aa20.1■□□□□ 0.81
ARFGAP1-216ENST00000522959 TRIM28Q13263 835 aaKnown RBP20.1■□□□□ 0.81
ARFGAP1-216ENST00000522959 G2E3Q7L622 706 aa20.1■□□□□ 0.81
ARFGAP1-216ENST00000522959 JARID2Q92833 1246 aaPredicted RBP20.1■□□□□ 0.81
ARFGAP1-216ENST00000522959 ATP6V0A2Q9Y487 856 aa20.1■□□□□ 0.81
ARFGAP1-216ENST00000522959 DUOX1Q9NRD9 1551 aa20.09■□□□□ 0.81
ARFGAP1-216ENST00000522959 ADAMTSL1Q8N6G6 1762 aa20.09■□□□□ 0.81
ARFGAP1-216ENST00000522959 APLP1P51693 650 aa20.09■□□□□ 0.81
ARFGAP1-216ENST00000522959 MYD88Q99836 296 aa20.09■□□□□ 0.81
ARFGAP1-216ENST00000522959 CC2D2BQ6DHV5 1058 aa20.08■□□□□ 0.81
ARFGAP1-216ENST00000522959 RIC3Q7Z5B4 369 aa20.08■□□□□ 0.81
ARFGAP1-216ENST00000522959 SMC1BQ8NDV3 1235 aa20.08■□□□□ 0.81
ARFGAP1-216ENST00000522959 L3MBTL3Q96JM7 780 aaPredicted RBP20.08■□□□□ 0.81
ARFGAP1-216ENST00000522959 CELF1Q92879 486 aaKnown RBP20.07■□□□□ 0.8
ARFGAP1-216ENST00000522959 IL16Q14005 1332 aa20.06■□□□□ 0.8
ARFGAP1-216ENST00000522959 MYH3P11055 1940 aa20.06■□□□□ 0.8
ARFGAP1-216ENST00000522959 SF3B3Q15393 1217 aaKnown RBP20.06■□□□□ 0.8
ARFGAP1-216ENST00000522959 NCBP3Q53F19 620 aaKnown RBP20.06■□□□□ 0.8
ARFGAP1-216ENST00000522959 CCDC30Q5VVM6 783 aa20.06■□□□□ 0.8
ARFGAP1-216ENST00000522959 SP8Q8IXZ3 490 aa20.06■□□□□ 0.8
ARFGAP1-216ENST00000522959 FAM9BQ8IZU0 186 aa20.06■□□□□ 0.8
ARFGAP1-216ENST00000522959 FANCIQ9NVI1 1328 aa20.05■□□□□ 0.8
ARFGAP1-216ENST00000522959 IRS4O14654 1257 aaPredicted RBP20.05■□□□□ 0.8
ARFGAP1-216ENST00000522959 BBOX1O75936 387 aa20.05■□□□□ 0.8
ARFGAP1-216ENST00000522959 IGKV5-2P06315 115 aa20.05■□□□□ 0.8
ARFGAP1-216ENST00000522959 GRAPQ13588 217 aa20.05■□□□□ 0.8
ARFGAP1-216ENST00000522959 AOC3Q16853 763 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms