RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 CHMP7Q8WUX9 453 aaPredicted RBP7.52□□□□□ -1.21
SKP1-210ENST00000522855 AIDAQ96BJ3 306 aa7.52□□□□□ -1.21
SKP1-210ENST00000522855 CABP1Q9NZU7 370 aa7.52□□□□□ -1.21
SKP1-210ENST00000522855 SOWAHDA6NJG2 315 aa7.51□□□□□ -1.21
SKP1-210ENST00000522855 ABL1P00519 1130 aa7.51□□□□□ -1.21
SKP1-210ENST00000522855 TATP17735 454 aaPredicted RBP7.51□□□□□ -1.21
SKP1-210ENST00000522855 CD33P20138 364 aa7.51□□□□□ -1.21
SKP1-210ENST00000522855 COL8A1P27658 744 aa7.51□□□□□ -1.21
SKP1-210ENST00000522855 DGKGP49619 791 aa7.51□□□□□ -1.21
SKP1-210ENST00000522855 AVENQ9NQS1 362 aaPredicted RBP7.51□□□□□ -1.21
SKP1-210ENST00000522855 PARP3Q9Y6F1 533 aa7.51□□□□□ -1.21
SKP1-210ENST00000522855 C21orf2O43822 256 aa7.5□□□□□ -1.21
SKP1-210ENST00000522855 HIRAP54198 1017 aaPredicted RBP7.5□□□□□ -1.21
SKP1-210ENST00000522855 SF3B2Q13435 895 aaKnown RBP7.5□□□□□ -1.21
SKP1-210ENST00000522855 SH3PXD2AQ5TCZ1 1133 aa7.5□□□□□ -1.21
SKP1-210ENST00000522855 FCHSD1Q86WN1 690 aa7.5□□□□□ -1.21
SKP1-210ENST00000522855 L3MBTL2Q969R5 705 aa7.5□□□□□ -1.21
SKP1-210ENST00000522855 MDFIQ99750 246 aa7.5□□□□□ -1.21
SKP1-210ENST00000522855 STRN4Q9NRL3 753 aa7.5□□□□□ -1.21
SKP1-210ENST00000522855 MKL2Q9ULH7 1088 aa7.5□□□□□ -1.21
SKP1-210ENST00000522855 H3BRB1 525 aa7.49□□□□□ -1.21
SKP1-210ENST00000522855 NOS2P35228 1153 aa7.49□□□□□ -1.21
SKP1-210ENST00000522855 ARSJQ5FYB0 599 aaPredicted RBP7.49□□□□□ -1.21
SKP1-210ENST00000522855 TBCELQ5QJ74 424 aa7.49□□□□□ -1.21
SKP1-210ENST00000522855 GLYCTKQ8IVS8 523 aa7.49□□□□□ -1.21
SKP1-210ENST00000522855 GTF3C2Q8WUA4 911 aaPredicted RBP7.49□□□□□ -1.21
SKP1-210ENST00000522855 SPOCK3Q9BQ16 436 aa7.49□□□□□ -1.21
SKP1-210ENST00000522855 C2orf49Q9BVC5 232 aaPredicted RBP7.49□□□□□ -1.21
SKP1-210ENST00000522855 TUT1Q9H6E5 874 aaKnown RBP7.49□□□□□ -1.21
SKP1-210ENST00000522855 SEPT3Q9UH03 358 aa7.49□□□□□ -1.21
SKP1-210ENST00000522855 GPC6Q9Y625 555 aaPredicted RBP7.49□□□□□ -1.21
SKP1-210ENST00000522855 SERTM1A2A2V5 107 aa7.48□□□□□ -1.21
SKP1-210ENST00000522855 KRBA1A5PL33 1030 aa7.48□□□□□ -1.21
SKP1-210ENST00000522855 NEURL1BA8MQ27 555 aa7.48□□□□□ -1.21
SKP1-210ENST00000522855 KHNYNO15037 678 aaKnown RBP7.48□□□□□ -1.21
SKP1-210ENST00000522855 SCNN1AP37088 669 aa7.48□□□□□ -1.21
SKP1-210ENST00000522855 ZNF211Q13398 564 aaPredicted RBP7.48□□□□□ -1.21
SKP1-210ENST00000522855 LAMC2Q13753 1193 aa7.48□□□□□ -1.21
SKP1-210ENST00000522855 ZNF468Q5VIY5 522 aaPredicted RBP7.48□□□□□ -1.21
SKP1-210ENST00000522855 HELQQ8TDG4 1101 aa7.48□□□□□ -1.21
SKP1-210ENST00000522855 BTBD6Q96KE9 485 aa7.48□□□□□ -1.21
SKP1-210ENST00000522855 BIN2Q9UBW5 565 aaPredicted RBP7.48□□□□□ -1.21
SKP1-210ENST00000522855 ZNF232Q9UNY5 417 aa7.48□□□□□ -1.21
SKP1-210ENST00000522855 ICMTO60725 284 aa7.47□□□□□ -1.21
SKP1-210ENST00000522855 ADH6P28332 368 aa7.47□□□□□ -1.21
SKP1-210ENST00000522855 C16orf46Q6P387 395 aa7.47□□□□□ -1.21
SKP1-210ENST00000522855 ALYREFQ86V81 257 aaKnown RBP7.47□□□□□ -1.21
SKP1-210ENST00000522855 SUV39H2Q9H5I1 410 aa7.47□□□□□ -1.21
SKP1-210ENST00000522855 FKBP4Q02790 459 aaKnown RBP eCLIP7.46□□□□□ -1.22
SKP1-210ENST00000522855 MSTNO14793 375 aa7.45□□□□□ -1.22
SKP1-210ENST00000522855 NAA30Q147X3 362 aaPredicted RBP7.45□□□□□ -1.22
SKP1-210ENST00000522855 CHSY3Q70JA7 882 aa7.45□□□□□ -1.22
SKP1-210ENST00000522855 GNB5O14775 395 aa7.44□□□□□ -1.22
SKP1-210ENST00000522855 FAM13AO94988 1023 aa7.44□□□□□ -1.22
SKP1-210ENST00000522855 GRIN2CQ14957 1233 aa7.44□□□□□ -1.22
SKP1-210ENST00000522855 C1orf53Q5VUE5 145 aa7.44□□□□□ -1.22
SKP1-210ENST00000522855 BICDL1Q6ZP65 573 aa7.44□□□□□ -1.22
SKP1-210ENST00000522855 CAPN12Q6ZSI9 719 aa7.44□□□□□ -1.22
SKP1-210ENST00000522855 MYO19Q96H55 970 aa7.44□□□□□ -1.22
SKP1-210ENST00000522855 RRAGCQ9HB90 399 aa7.44□□□□□ -1.22
SKP1-210ENST00000522855 MARK1Q9P0L2 795 aa7.44□□□□□ -1.22
SKP1-210ENST00000522855 ERCC3P19447 782 aa7.43□□□□□ -1.22
SKP1-210ENST00000522855 RTN1Q16799 776 aa7.43□□□□□ -1.22
SKP1-210ENST00000522855 LRRC69Q6ZNQ3 347 aa7.43□□□□□ -1.22
SKP1-210ENST00000522855 ABTB2Q8N961 1025 aa7.43□□□□□ -1.22
SKP1-210ENST00000522855 ANO2Q9NQ90 1003 aa7.43□□□□□ -1.22
SKP1-210ENST00000522855 AMPD1P23109 780 aa7.42□□□□□ -1.22
SKP1-210ENST00000522855 PCBP4P57723 403 aaKnown RBP7.42□□□□□ -1.22
SKP1-210ENST00000522855 HIF1AQ16665 826 aa7.42□□□□□ -1.22
SKP1-210ENST00000522855 ALDH16A1Q8IZ83 802 aa7.42□□□□□ -1.22
SKP1-210ENST00000522855 NGLY1Q96IV0 654 aa7.42□□□□□ -1.22
SKP1-210ENST00000522855 QTRT2Q9H974 415 aaKnown RBP7.42□□□□□ -1.22
SKP1-210ENST00000522855 GJA3Q9Y6H8 435 aa7.42□□□□□ -1.22
SKP1-210ENST00000522855 MTMR3Q13615 1198 aa7.41□□□□□ -1.22
SKP1-210ENST00000522855 ALKBH2Q6NS38 261 aa7.41□□□□□ -1.22
SKP1-210ENST00000522855 RGS22Q8NE09 1264 aa7.41□□□□□ -1.22
SKP1-210ENST00000522855 RHPN1Q8TCX5 695 aa7.41□□□□□ -1.22
SKP1-210ENST00000522855 PHACTR1Q9C0D0 580 aa7.41□□□□□ -1.22
SKP1-210ENST00000522855 STIM2Q9P246 746 aa7.41□□□□□ -1.22
SKP1-210ENST00000522855 ADAM23O75077 832 aa7.4□□□□□ -1.22
SKP1-210ENST00000522855 NPR3P17342 541 aa7.4□□□□□ -1.22
SKP1-210ENST00000522855 BRD2P25440 801 aaKnown RBP7.4□□□□□ -1.22
SKP1-210ENST00000522855 KCNQ4P56696 695 aa7.4□□□□□ -1.22
SKP1-210ENST00000522855 TYRO3Q06418 890 aa7.4□□□□□ -1.22
SKP1-210ENST00000522855 SFSWAPQ12872 951 aaKnown RBP7.4□□□□□ -1.22
SKP1-210ENST00000522855 COX20Q5RI15 118 aa7.4□□□□□ -1.22
SKP1-210ENST00000522855 TRIM11Q96F44 468 aa7.4□□□□□ -1.22
SKP1-210ENST00000522855 HSH2DQ96JZ2 352 aa7.4□□□□□ -1.22
SKP1-210ENST00000522855 SLC30A3Q99726 388 aa7.4□□□□□ -1.22
SKP1-210ENST00000522855 SAP130Q9H0E3 1048 aa7.4□□□□□ -1.22
SKP1-210ENST00000522855 DCTN4Q9UJW0 460 aa7.4□□□□□ -1.22
SKP1-210ENST00000522855 HCN4Q9Y3Q4 1203 aa7.4□□□□□ -1.22
SKP1-210ENST00000522855 ELOA3CA0A087WX78 387 aaPredicted RBP7.39□□□□□ -1.23
SKP1-210ENST00000522855 ELOA3DA6NLF2 546 aaPredicted RBP7.39□□□□□ -1.23
SKP1-210ENST00000522855 ADARB2-AS1A8MUL3 147 aa7.39□□□□□ -1.23
SKP1-210ENST00000522855 NDUFB5O43674 189 aa7.39□□□□□ -1.23
SKP1-210ENST00000522855 SIN3BO75182 1162 aa7.39□□□□□ -1.23
SKP1-210ENST00000522855 MPSTP25325 297 aa7.39□□□□□ -1.23
SKP1-210ENST00000522855 COL9A3Q14050 684 aaPredicted RBP7.39□□□□□ -1.23
SKP1-210ENST00000522855 ELOA3BQ3SY89 546 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms