RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 LRFN2Q9ULH4 789 aa8.53□□□□□ -1.04
HMGB1P1-201ENST00000522557 KCNH4Q9UQ05 1017 aa8.53□□□□□ -1.04
HMGB1P1-201ENST00000522557 EPXP11678 715 aa8.52□□□□□ -1.05
HMGB1P1-201ENST00000522557 ADH6P28332 368 aa8.52□□□□□ -1.05
HMGB1P1-201ENST00000522557 SNRPNP63162 240 aaKnown RBP8.52□□□□□ -1.05
HMGB1P1-201ENST00000522557 HIF1AQ16665 826 aa8.52□□□□□ -1.05
HMGB1P1-201ENST00000522557 SYT9Q86SS6 491 aa8.52□□□□□ -1.05
HMGB1P1-201ENST00000522557 BTBD6Q96KE9 485 aa8.52□□□□□ -1.05
HMGB1P1-201ENST00000522557 TGFBR3LH3BV60 316 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 BRD1O95696 1058 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 IRS1P35568 1242 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 KCNQ4P56696 695 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 PDE4CQ08493 712 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 SPEM2Q0P670 501 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 C11orf91Q3C1V1 193 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 COX20Q5RI15 118 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 RAB44Q7Z6P3 723 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 CLP1Q92989 425 aaKnown RBP8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 SCARF2Q96GP6 870 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 MYO19Q96H55 970 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 SAP130Q9H0E3 1048 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 AVENQ9NQS1 362 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 CXXC1Q9P0U4 656 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 IER5Q5VY09 327 aa8.5□□□□□ -1.05
HMGB1P1-201ENST00000522557 MKNK1Q9BUB5 465 aa8.5□□□□□ -1.05
HMGB1P1-201ENST00000522557 HOXB4P17483 251 aaPredicted RBP8.49□□□□□ -1.05
HMGB1P1-201ENST00000522557 AMPD1P23109 780 aa8.49□□□□□ -1.05
HMGB1P1-201ENST00000522557 GRNP28799 593 aaKnown RBP8.49□□□□□ -1.05
HMGB1P1-201ENST00000522557 RASSF7Q02833 373 aa8.49□□□□□ -1.05
HMGB1P1-201ENST00000522557 BEND7Q8N7W2 519 aaPredicted RBP8.49□□□□□ -1.05
HMGB1P1-201ENST00000522557 RRAGCQ9HB90 399 aa8.49□□□□□ -1.05
HMGB1P1-201ENST00000522557 CARNS1A5YM72 827 aa8.48□□□□□ -1.05
HMGB1P1-201ENST00000522557 MICAL2O94851 1124 aa8.48□□□□□ -1.05
HMGB1P1-201ENST00000522557 IDH3AP50213 366 aa8.48□□□□□ -1.05
HMGB1P1-201ENST00000522557 KCNA1Q09470 495 aa8.48□□□□□ -1.05
HMGB1P1-201ENST00000522557 NAA30Q147X3 362 aaPredicted RBP8.48□□□□□ -1.05
HMGB1P1-201ENST00000522557 IFT43Q96FT9 208 aa8.48□□□□□ -1.05
HMGB1P1-201ENST00000522557 RNF225M0QZC1 329 aaPredicted RBP8.47□□□□□ -1.05
HMGB1P1-201ENST00000522557 OPLAHO14841 1288 aa8.47□□□□□ -1.05
HMGB1P1-201ENST00000522557 ATP2B4P23634 1241 aa8.47□□□□□ -1.05
HMGB1P1-201ENST00000522557 INPP5BP32019 993 aa8.47□□□□□ -1.05
HMGB1P1-201ENST00000522557 BHMTQ93088 406 aa8.47□□□□□ -1.05
HMGB1P1-201ENST00000522557 GSX2Q9BZM3 304 aa8.47□□□□□ -1.05
HMGB1P1-201ENST00000522557 SIN3BO75182 1162 aa8.46□□□□□ -1.06
HMGB1P1-201ENST00000522557 FAM26DQ5JW98 314 aa8.46□□□□□ -1.06
HMGB1P1-201ENST00000522557 CHSY3Q70JA7 882 aa8.46□□□□□ -1.06
HMGB1P1-201ENST00000522557 PODNQ7Z5L7 613 aa8.46□□□□□ -1.06
HMGB1P1-201ENST00000522557 TMEM151AQ8N4L1 468 aa8.46□□□□□ -1.06
HMGB1P1-201ENST00000522557 MDFIQ99750 246 aa8.46□□□□□ -1.06
HMGB1P1-201ENST00000522557 USP20Q9Y2K6 914 aa8.46□□□□□ -1.06
HMGB1P1-201ENST00000522557 GDF11O95390 407 aa8.45□□□□□ -1.06
HMGB1P1-201ENST00000522557 SCNN1AP37088 669 aa8.45□□□□□ -1.06
HMGB1P1-201ENST00000522557 C16orf46Q6P387 395 aa8.45□□□□□ -1.06
HMGB1P1-201ENST00000522557 LINC00114Q6XXX2 140 aa8.45□□□□□ -1.06
HMGB1P1-201ENST00000522557 COL26A1Q96A83 441 aa8.45□□□□□ -1.06
HMGB1P1-201ENST00000522557 ELOA3CA0A087WX78 387 aaPredicted RBP8.44□□□□□ -1.06
HMGB1P1-201ENST00000522557 ELOA3DA6NLF2 546 aaPredicted RBP8.44□□□□□ -1.06
HMGB1P1-201ENST00000522557 PHF20L1A8MW92 1017 aa8.44□□□□□ -1.06
HMGB1P1-201ENST00000522557 ELOA3BQ3SY89 546 aa8.44□□□□□ -1.06
HMGB1P1-201ENST00000522557 PHLDB3Q6NSJ2 640 aa8.44□□□□□ -1.06
HMGB1P1-201ENST00000522557 TREML1Q86YW5 311 aa8.44□□□□□ -1.06
HMGB1P1-201ENST00000522557 AEBP1Q8IUX7 1158 aa8.44□□□□□ -1.06
HMGB1P1-201ENST00000522557 ELOA3Q8NG57 546 aa8.44□□□□□ -1.06
HMGB1P1-201ENST00000522557 GNEQ9Y223 722 aaKnown RBP8.44□□□□□ -1.06
HMGB1P1-201ENST00000522557 ADARB2-AS1A8MUL3 147 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 PATL2C9JE40 543 aaKnown RBP8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 ARSDP51689 593 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 NEUROD1Q13562 356 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 CCINQ13939 588 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 KANK3Q6NY19 840 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 ETFBKMTQ8IXQ9 262 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 TNFRSF25Q93038 417 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 IGFLR1Q9H665 355 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 SEPT3Q9UH03 358 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 MKL2Q9ULH7 1088 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 CCDC9Q9Y3X0 531 aaKnown RBP8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 TNFRSF10BO14763 440 aa8.42□□□□□ -1.06
HMGB1P1-201ENST00000522557 PTCD1O75127 700 aaKnown RBP8.42□□□□□ -1.06
HMGB1P1-201ENST00000522557 ALAS2P22557 587 aa8.42□□□□□ -1.06
HMGB1P1-201ENST00000522557 DGKGP49619 791 aa8.42□□□□□ -1.06
HMGB1P1-201ENST00000522557 SUV39H2Q9H5I1 410 aa8.42□□□□□ -1.06
HMGB1P1-201ENST00000522557 RTCBQ9Y3I0 505 aaKnown RBP8.42□□□□□ -1.06
HMGB1P1-201ENST00000522557 EPB42P16452 691 aa8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 NFKB1P19838 968 aa8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 BRD2P25440 801 aaKnown RBP8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 TARSP26639 723 aaKnown RBP8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 TBC1D8BQ0IIM8 1120 aa8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 KRT25Q7Z3Z0 450 aa8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 RGL4Q8IZJ4 473 aa8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 RGS22Q8NE09 1264 aa8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 PNMA5Q96PV4 448 aa8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 ZBTB39O15060 712 aa8.4□□□□□ -1.06
HMGB1P1-201ENST00000522557 SASH3O75995 380 aa8.4□□□□□ -1.06
HMGB1P1-201ENST00000522557 SSFA2P28290 1259 aa8.4□□□□□ -1.06
HMGB1P1-201ENST00000522557 ADH7P40394 386 aa8.4□□□□□ -1.06
HMGB1P1-201ENST00000522557 CMTR1Q8N1G2 835 aaKnown RBP8.4□□□□□ -1.06
HMGB1P1-201ENST00000522557 ZFATQ9P243 1243 aa8.4□□□□□ -1.06
HMGB1P1-201ENST00000522557 STARD13Q9Y3M8 1113 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms