RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 PSMD1Q99460 953 aa18.5■□□□□ 0.55
HMBOX1-209ENST00000522468 FZD9O00144 591 aa18.49■□□□□ 0.55
HMBOX1-209ENST00000522468 LMOD3Q0VAK6 560 aa18.49■□□□□ 0.55
HMBOX1-209ENST00000522468 CHADLQ6NUI6 762 aa18.49■□□□□ 0.55
HMBOX1-209ENST00000522468 C3orf67Q6ZVT6 689 aa18.49■□□□□ 0.55
HMBOX1-209ENST00000522468 TRIM35Q9UPQ4 493 aa18.49■□□□□ 0.55
HMBOX1-209ENST00000522468 CHL1O00533 1208 aa18.48■□□□□ 0.55
HMBOX1-209ENST00000522468 ANXA1P04083 346 aa18.48■□□□□ 0.55
HMBOX1-209ENST00000522468 IARSP41252 1262 aaKnown RBP18.48■□□□□ 0.55
HMBOX1-209ENST00000522468 SLC51AQ86UW1 340 aa18.48■□□□□ 0.55
HMBOX1-209ENST00000522468 SYNE4Q8N205 404 aa18.48■□□□□ 0.55
HMBOX1-209ENST00000522468 TAF1DQ9H5J8 278 aaPredicted RBP18.48■□□□□ 0.55
HMBOX1-209ENST00000522468 IQCA1LA6NCM1 817 aa18.47■□□□□ 0.55
HMBOX1-209ENST00000522468 EIF2S2P20042 333 aaKnown RBP18.47■□□□□ 0.55
HMBOX1-209ENST00000522468 PARP10Q53GL7 1025 aa18.47■□□□□ 0.55
HMBOX1-209ENST00000522468 SLC10A5Q5PT55 438 aa18.47■□□□□ 0.55
HMBOX1-209ENST00000522468 CC2D2BQ6DHV5 1058 aa18.47■□□□□ 0.55
HMBOX1-209ENST00000522468 CCDC146Q8IYE0 955 aa18.47■□□□□ 0.55
HMBOX1-209ENST00000522468 CRAMP1Q96RY5 1269 aa18.47■□□□□ 0.55
HMBOX1-209ENST00000522468 RPGRQ92834 1020 aaKnown RBP18.46■□□□□ 0.55
HMBOX1-209ENST00000522468 PASKQ96RG2 1323 aa18.46■□□□□ 0.55
HMBOX1-209ENST00000522468 LTBP1Q14766 1721 aa18.46■□□□□ 0.55
HMBOX1-209ENST00000522468 KRT24Q2M2I5 525 aa18.45■□□□□ 0.54
HMBOX1-209ENST00000522468 PPP1R42Q7Z4L9 355 aa18.45■□□□□ 0.54
HMBOX1-209ENST00000522468 LDHDQ86WU2 507 aa18.45■□□□□ 0.54
HMBOX1-209ENST00000522468 RUNDC1Q96C34 613 aa18.45■□□□□ 0.54
HMBOX1-209ENST00000522468 COPS6Q7L5N1 327 aa18.44■□□□□ 0.54
HMBOX1-209ENST00000522468 RBM17Q96I25 401 aaKnown RBP18.44■□□□□ 0.54
HMBOX1-209ENST00000522468 CREBZFQ9NS37 354 aa18.44■□□□□ 0.54
HMBOX1-209ENST00000522468 ADAMTS8Q9UP79 889 aa18.44■□□□□ 0.54
HMBOX1-209ENST00000522468 RNF123Q5XPI4 1314 aa18.44■□□□□ 0.54
HMBOX1-209ENST00000522468 ITGBL1O95965 494 aaPredicted RBP18.43■□□□□ 0.54
HMBOX1-209ENST00000522468 NEUROD2Q15784 382 aa18.43■□□□□ 0.54
HMBOX1-209ENST00000522468 GRIPAP1Q4V328 841 aa18.43■□□□□ 0.54
HMBOX1-209ENST00000522468 GPC2Q8N158 579 aa18.43■□□□□ 0.54
HMBOX1-209ENST00000522468 XAGE3Q8WTP9 111 aa18.43■□□□□ 0.54
HMBOX1-209ENST00000522468 UTP14AQ9BVJ6 771 aaKnown RBP18.43■□□□□ 0.54
HMBOX1-209ENST00000522468 DDX21Q9NR30 783 aaKnown RBP eCLIP18.43■□□□□ 0.54
HMBOX1-209ENST00000522468 DDX60Q8IY21 1712 aaKnown RBP18.43■□□□□ 0.54
HMBOX1-209ENST00000522468 TAF1P21675 1872 aa18.42■□□□□ 0.54
HMBOX1-209ENST00000522468 PPEF1O14829 653 aaPredicted RBP18.42■□□□□ 0.54
HMBOX1-209ENST00000522468 NLRP10Q86W26 655 aa18.42■□□□□ 0.54
HMBOX1-209ENST00000522468 HACL1Q9UJ83 578 aa18.42■□□□□ 0.54
HMBOX1-209ENST00000522468 EPHX2P34913 555 aa18.41■□□□□ 0.54
HMBOX1-209ENST00000522468 COL13A1Q5TAT6 717 aaPredicted RBP18.41■□□□□ 0.54
HMBOX1-209ENST00000522468 NECTIN2Q92692 538 aa18.41■□□□□ 0.54
HMBOX1-209ENST00000522468 NLRP3Q96P20 1036 aa18.41■□□□□ 0.54
HMBOX1-209ENST00000522468 PRKRIP1Q9H875 184 aaPredicted RBP18.41■□□□□ 0.54
HMBOX1-209ENST00000522468 ABCC4O15439 1325 aa18.41■□□□□ 0.54
HMBOX1-209ENST00000522468 HOXB7P09629 217 aa18.4■□□□□ 0.54
HMBOX1-209ENST00000522468 TCIRG1Q13488 830 aa18.4■□□□□ 0.54
HMBOX1-209ENST00000522468 HSP90AB3PQ58FF7 597 aa18.4■□□□□ 0.54
HMBOX1-209ENST00000522468 JDP2Q8WYK2 163 aa18.4■□□□□ 0.54
HMBOX1-209ENST00000522468 ATP6V0A2Q9Y487 856 aa18.4■□□□□ 0.54
HMBOX1-209ENST00000522468 LRRC37AA6NMS7 1700 aa18.4■□□□□ 0.54
HMBOX1-209ENST00000522468 AIMP1Q12904 312 aaKnown RBP18.39■□□□□ 0.53
HMBOX1-209ENST00000522468 WDR43Q15061 677 aaKnown RBP eCLIP18.39■□□□□ 0.53
HMBOX1-209ENST00000522468 CHPF2Q9P2E5 772 aa18.39■□□□□ 0.53
HMBOX1-209ENST00000522468 PNMA8AQ86V59 439 aaPredicted RBP18.38■□□□□ 0.53
HMBOX1-209ENST00000522468 CFAP44Q96MT7 982 aa18.38■□□□□ 0.53
HMBOX1-209ENST00000522468 RTFDC1Q9BY42 306 aaPredicted RBP18.38■□□□□ 0.53
HMBOX1-209ENST00000522468 TCERG1O14776 1098 aaKnown RBP18.37■□□□□ 0.53
HMBOX1-209ENST00000522468 ZNF853P0CG23 659 aa18.37■□□□□ 0.53
HMBOX1-209ENST00000522468 HSPA1AP0DMV8 641 aaKnown RBP18.37■□□□□ 0.53
HMBOX1-209ENST00000522468 HSPA1BP0DMV9 641 aaKnown RBP18.37■□□□□ 0.53
HMBOX1-209ENST00000522468 HCLS1P14317 486 aaPredicted RBP18.37■□□□□ 0.53
HMBOX1-209ENST00000522468 SCNN1DP51172 638 aa18.37■□□□□ 0.53
HMBOX1-209ENST00000522468 EAPPQ56P03 285 aaPredicted RBP18.37■□□□□ 0.53
HMBOX1-209ENST00000522468 LARGE2Q8N3Y3 721 aa18.37■□□□□ 0.53
HMBOX1-209ENST00000522468 CNTNAP1P78357 1384 aa18.37■□□□□ 0.53
HMBOX1-209ENST00000522468 DUOX1Q9NRD9 1551 aa18.37■□□□□ 0.53
HMBOX1-209ENST00000522468 EIF6P56537 245 aaKnown RBP18.36■□□□□ 0.53
HMBOX1-209ENST00000522468 HDGFL1Q5TGJ6 251 aa18.36■□□□□ 0.53
HMBOX1-209ENST00000522468 SH3TC1Q8TE82 1336 aa18.36■□□□□ 0.53
HMBOX1-209ENST00000522468 ISCA1Q9BUE6 129 aa18.36■□□□□ 0.53
HMBOX1-209ENST00000522468 VPS33BQ9H267 617 aa18.36■□□□□ 0.53
HMBOX1-209ENST00000522468 LAS1LQ9Y4W2 734 aaKnown RBP18.36■□□□□ 0.53
HMBOX1-209ENST00000522468 COL4A1P02462 1669 aa18.35■□□□□ 0.53
HMBOX1-209ENST00000522468 BBOX1O75936 387 aa18.35■□□□□ 0.53
HMBOX1-209ENST00000522468 SP8Q8IXZ3 490 aa18.35■□□□□ 0.53
HMBOX1-209ENST00000522468 PLBD2Q8NHP8 589 aa18.35■□□□□ 0.53
HMBOX1-209ENST00000522468 MBIPQ9NS73 344 aa18.35■□□□□ 0.53
HMBOX1-209ENST00000522468 DBF4Q9UBU7 674 aaPredicted RBP18.35■□□□□ 0.53
HMBOX1-209ENST00000522468 MKRN1Q9UHC7 482 aaKnown RBP18.35■□□□□ 0.53
HMBOX1-209ENST00000522468 TRMT112Q9UI30 125 aaKnown RBP18.35■□□□□ 0.53
HMBOX1-209ENST00000522468 MAP1SQ66K74 1059 aaPredicted RBP18.34■□□□□ 0.53
HMBOX1-209ENST00000522468 ANKRD13DQ6ZTN6 518 aa18.34■□□□□ 0.53
HMBOX1-209ENST00000522468 GJA3Q9Y6H8 435 aa18.34■□□□□ 0.53
HMBOX1-209ENST00000522468 TMEM88BA6NKF7 163 aa18.33■□□□□ 0.52
HMBOX1-209ENST00000522468 PPIP5K2O43314 1243 aa18.33■□□□□ 0.52
HMBOX1-209ENST00000522468 AOC3Q16853 763 aa18.33■□□□□ 0.52
HMBOX1-209ENST00000522468 DUSP27Q5VZP5 1158 aa18.33■□□□□ 0.52
HMBOX1-209ENST00000522468 CNTROBQ8N137 903 aa18.33■□□□□ 0.52
HMBOX1-209ENST00000522468 CLEC11AQ9Y240 323 aa18.33■□□□□ 0.52
HMBOX1-209ENST00000522468 EPS15P42566 896 aa18.32■□□□□ 0.52
HMBOX1-209ENST00000522468 GRAPQ13588 217 aa18.32■□□□□ 0.52
HMBOX1-209ENST00000522468 NIM1KQ8IY84 436 aa18.32■□□□□ 0.52
HMBOX1-209ENST00000522468 GRAPLQ8TC17 118 aaPredicted RBP18.32■□□□□ 0.52
HMBOX1-209ENST00000522468 HYPKQ9NX55 129 aa18.32■□□□□ 0.52
HMBOX1-209ENST00000522468 TRPM7Q96QT4 1865 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms