RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 CLEC11AQ9Y240 323 aa27.34■■□□□ 1.97
PABPC1-218ENST00000521865 NTSR2O95665 410 aa27.33■■□□□ 1.97
PABPC1-218ENST00000521865 PARP10Q53GL7 1025 aa27.33■■□□□ 1.97
PABPC1-218ENST00000521865 NECTIN2Q92692 538 aa27.33■■□□□ 1.97
PABPC1-218ENST00000521865 PSMD1Q99460 953 aa27.33■■□□□ 1.97
PABPC1-218ENST00000521865 CREBZFQ9NS37 354 aa27.33■■□□□ 1.97
PABPC1-218ENST00000521865 ANXA1P04083 346 aa27.32■■□□□ 1.96
PABPC1-218ENST00000521865 HOXA10P31260 410 aaPredicted RBP27.32■■□□□ 1.96
PABPC1-218ENST00000521865 COL13A1Q5TAT6 717 aaPredicted RBP27.32■■□□□ 1.96
PABPC1-218ENST00000521865 CCDC146Q8IYE0 955 aa27.32■■□□□ 1.96
PABPC1-218ENST00000521865 BABAM1Q9NWV8 329 aa27.32■■□□□ 1.96
PABPC1-218ENST00000521865 FZD9O00144 591 aa27.31■■□□□ 1.96
PABPC1-218ENST00000521865 NLRP3Q96P20 1036 aa27.31■■□□□ 1.96
PABPC1-218ENST00000521865 TMX4Q9H1E5 349 aaPredicted RBP27.31■■□□□ 1.96
PABPC1-218ENST00000521865 MKRN1Q9UHC7 482 aaKnown RBP27.31■■□□□ 1.96
PABPC1-218ENST00000521865 RIC1Q4ADV7 1423 aa27.31■■□□□ 1.96
PABPC1-218ENST00000521865 PPEF1O14829 653 aaPredicted RBP27.3■■□□□ 1.96
PABPC1-218ENST00000521865 HSPA1AP0DMV8 641 aaKnown RBP27.3■■□□□ 1.96
PABPC1-218ENST00000521865 HSPA1BP0DMV9 641 aaKnown RBP27.3■■□□□ 1.96
PABPC1-218ENST00000521865 EPHX2P34913 555 aa27.3■■□□□ 1.96
PABPC1-218ENST00000521865 AIMP1Q12904 312 aaKnown RBP27.3■■□□□ 1.96
PABPC1-218ENST00000521865 PDIA6Q15084 440 aa27.3■■□□□ 1.96
PABPC1-218ENST00000521865 PROSER3Q2NL68 480 aa27.3■■□□□ 1.96
PABPC1-218ENST00000521865 UTP14AQ9BVJ6 771 aaKnown RBP27.3■■□□□ 1.96
PABPC1-218ENST00000521865 RNF123Q5XPI4 1314 aa27.3■■□□□ 1.96
PABPC1-218ENST00000521865 MYBBP1AQ9BQG0 1328 aaKnown RBP27.3■■□□□ 1.96
PABPC1-218ENST00000521865 EIF6P56537 245 aaKnown RBP27.29■■□□□ 1.96
PABPC1-218ENST00000521865 WDR43Q15061 677 aaKnown RBP eCLIP27.29■■□□□ 1.96
PABPC1-218ENST00000521865 GPC2Q8N158 579 aa27.29■■□□□ 1.96
PABPC1-218ENST00000521865 CRAMP1Q96RY5 1269 aa27.29■■□□□ 1.96
PABPC1-218ENST00000521865 LAS1LQ9Y4W2 734 aaKnown RBP27.29■■□□□ 1.96
PABPC1-218ENST00000521865 GJA3Q9Y6H8 435 aa27.29■■□□□ 1.96
PABPC1-218ENST00000521865 NUP98P52948 1817 aa27.28■■□□□ 1.96
PABPC1-218ENST00000521865 GRIPAP1Q4V328 841 aa27.28■■□□□ 1.96
PABPC1-218ENST00000521865 LRP10Q7Z4F1 713 aa27.28■■□□□ 1.96
PABPC1-218ENST00000521865 LARGE2Q8N3Y3 721 aa27.28■■□□□ 1.96
PABPC1-218ENST00000521865 C3orf67Q6ZVT6 689 aa27.27■■□□□ 1.96
PABPC1-218ENST00000521865 COPS6Q7L5N1 327 aa27.27■■□□□ 1.96
PABPC1-218ENST00000521865 PNMA8AQ86V59 439 aaPredicted RBP27.27■■□□□ 1.96
PABPC1-218ENST00000521865 HSP90AB3PQ58FF7 597 aa27.26■■□□□ 1.95
PABPC1-218ENST00000521865 XAGE3Q8WTP9 111 aa27.26■■□□□ 1.95
PABPC1-218ENST00000521865 SNED1Q8TER0 1413 aa27.25■■□□□ 1.95
PABPC1-218ENST00000521865 PASKQ96RG2 1323 aa27.24■■□□□ 1.95
PABPC1-218ENST00000521865 RUNDC1Q96C34 613 aa27.24■■□□□ 1.95
PABPC1-218ENST00000521865 PCNTO95613 3336 aa27.24■■□□□ 1.95
PABPC1-218ENST00000521865 SCN4AP35499 1836 aa27.23■■□□□ 1.95
PABPC1-218ENST00000521865 LMOD1P29536 600 aaPredicted RBP27.23■■□□□ 1.95
PABPC1-218ENST00000521865 SLC51AQ86UW1 340 aa27.23■■□□□ 1.95
PABPC1-218ENST00000521865 TNS4Q8IZW8 715 aa27.23■■□□□ 1.95
PABPC1-218ENST00000521865 TMEM88BA6NKF7 163 aa27.22■■□□□ 1.95
PABPC1-218ENST00000521865 KRT24Q2M2I5 525 aa27.22■■□□□ 1.95
PABPC1-218ENST00000521865 SLC10A5Q5PT55 438 aa27.22■■□□□ 1.95
PABPC1-218ENST00000521865 NIM1KQ8IY84 436 aa27.22■■□□□ 1.95
PABPC1-218ENST00000521865 PPIP5K2O43314 1243 aa27.21■■□□□ 1.95
PABPC1-218ENST00000521865 ITGBL1O95965 494 aaPredicted RBP27.21■■□□□ 1.95
PABPC1-218ENST00000521865 MAP1SQ66K74 1059 aaPredicted RBP27.21■■□□□ 1.95
PABPC1-218ENST00000521865 DDX21Q9NR30 783 aaKnown RBP eCLIP27.21■■□□□ 1.95
PABPC1-218ENST00000521865 TRMT112Q9UI30 125 aaKnown RBP27.21■■□□□ 1.95
PABPC1-218ENST00000521865 ABCC4O15439 1325 aa27.2■■□□□ 1.95
PABPC1-218ENST00000521865 CHL1O00533 1208 aa27.2■■□□□ 1.94
PABPC1-218ENST00000521865 HCLS1P14317 486 aaPredicted RBP27.2■■□□□ 1.94
PABPC1-218ENST00000521865 NLRP10Q86W26 655 aa27.2■■□□□ 1.94
PABPC1-218ENST00000521865 CNTROBQ8N137 903 aa27.2■■□□□ 1.94
PABPC1-218ENST00000521865 ATP6V0A2Q9Y487 856 aa27.2■■□□□ 1.94
PABPC1-218ENST00000521865 TRIM35Q9UPQ4 493 aa27.19■■□□□ 1.94
PABPC1-218ENST00000521865 CNTNAP1P78357 1384 aa27.19■■□□□ 1.94
PABPC1-218ENST00000521865 CAPN15O75808 1086 aa27.18■■□□□ 1.94
PABPC1-218ENST00000521865 TCIRG1Q13488 830 aa27.18■■□□□ 1.94
PABPC1-218ENST00000521865 AOC3Q16853 763 aa27.18■■□□□ 1.94
PABPC1-218ENST00000521865 HDGFL1Q5TGJ6 251 aa27.18■■□□□ 1.94
PABPC1-218ENST00000521865 CHPF2Q9P2E5 772 aa27.18■■□□□ 1.94
PABPC1-218ENST00000521865 SUPT20HQ8NEM7 779 aa27.17■■□□□ 1.94
PABPC1-218ENST00000521865 ZNF428Q96B54 188 aa27.17■■□□□ 1.94
PABPC1-218ENST00000521865 ADAMTS8Q9UP79 889 aa27.17■■□□□ 1.94
PABPC1-218ENST00000521865 SH3TC1Q8TE82 1336 aa27.16■■□□□ 1.94
PABPC1-218ENST00000521865 BBOX1O75936 387 aa27.16■■□□□ 1.94
PABPC1-218ENST00000521865 DDX46Q7L014 1031 aaKnown RBP27.16■■□□□ 1.94
PABPC1-218ENST00000521865 COL4A5P29400 1685 aa27.16■■□□□ 1.94
PABPC1-218ENST00000521865 EPS15P42566 896 aa27.15■■□□□ 1.94
PABPC1-218ENST00000521865 DPP8Q6V1X1 898 aaPredicted RBP27.15■■□□□ 1.94
PABPC1-218ENST00000521865 SCNN1DP51172 638 aa27.14■■□□□ 1.94
PABPC1-218ENST00000521865 VEGFBP49765 207 aa27.13■■□□□ 1.93
PABPC1-218ENST00000521865 MPNDQ8N594 471 aa27.13■■□□□ 1.93
PABPC1-218ENST00000521865 VPS33BQ9H267 617 aa27.13■■□□□ 1.93
PABPC1-218ENST00000521865 DBF4Q9UBU7 674 aaPredicted RBP27.13■■□□□ 1.93
PABPC1-218ENST00000521865 HOXB7P09629 217 aa27.12■■□□□ 1.93
PABPC1-218ENST00000521865 SP8Q8IXZ3 490 aa27.12■■□□□ 1.93
PABPC1-218ENST00000521865 ABT1Q9ULW3 272 aaKnown RBP27.12■■□□□ 1.93
PABPC1-218ENST00000521865 GRAPQ13588 217 aa27.11■■□□□ 1.93
PABPC1-218ENST00000521865 ANKRD13DQ6ZTN6 518 aa27.11■■□□□ 1.93
PABPC1-218ENST00000521865 PLBD2Q8NHP8 589 aa27.11■■□□□ 1.93
PABPC1-218ENST00000521865 GRAPLQ8TC17 118 aaPredicted RBP27.11■■□□□ 1.93
PABPC1-218ENST00000521865 AIDAQ96BJ3 306 aa27.11■■□□□ 1.93
PABPC1-218ENST00000521865 ZNRF3Q9ULT6 936 aa27.11■■□□□ 1.93
PABPC1-218ENST00000521865 USP50Q70EL3 339 aaPredicted RBP27.1■■□□□ 1.93
PABPC1-218ENST00000521865 CFAP44Q96MT7 982 aa27.1■■□□□ 1.93
PABPC1-218ENST00000521865 RTFDC1Q9BY42 306 aaPredicted RBP27.1■■□□□ 1.93
PABPC1-218ENST00000521865 DEFB115Q30KQ5 88 aa27.09■■□□□ 1.93
PABPC1-218ENST00000521865 DUSP27Q5VZP5 1158 aa27.09■■□□□ 1.93
PABPC1-218ENST00000521865 ADAMTSL1Q8N6G6 1762 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms