RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 SUCLG2Q96I99 432 aa19.79■□□□□ 0.76
PCDHGA11-202ENST00000518882 NOLC1Q14978 699 aaKnown RBP eCLIP19.79■□□□□ 0.76
PCDHGA11-202ENST00000518882 MAP4K1Q92918 833 aa19.79■□□□□ 0.76
PCDHGA11-202ENST00000518882 TLR7Q9NYK1 1049 aaKnown RBP19.79■□□□□ 0.76
PCDHGA11-202ENST00000518882 PHRF1Q9P1Y6 1649 aaKnown RBP19.79■□□□□ 0.76
PCDHGA11-202ENST00000518882 HEG1Q9ULI3 1381 aa19.78■□□□□ 0.76
PCDHGA11-202ENST00000518882 CCDC8Q9H0W5 538 aaPredicted RBP19.78■□□□□ 0.76
PCDHGA11-202ENST00000518882 SIPA1L3O60292 1781 aaPredicted RBP19.78■□□□□ 0.76
PCDHGA11-202ENST00000518882 ZKSCAN1P17029 563 aaPredicted RBP19.78■□□□□ 0.76
PCDHGA11-202ENST00000518882 PLEKHO1Q53GL0 409 aaPredicted RBP19.78■□□□□ 0.76
PCDHGA11-202ENST00000518882 DNTTIP2Q5QJE6 756 aaKnown RBP19.78■□□□□ 0.76
PCDHGA11-202ENST00000518882 JARID2Q92833 1246 aaPredicted RBP19.78■□□□□ 0.76
PCDHGA11-202ENST00000518882 BICC1Q9H694 974 aaKnown RBP19.78■□□□□ 0.76
PCDHGA11-202ENST00000518882 TAF6LQ9Y6J9 622 aa19.78■□□□□ 0.76
PCDHGA11-202ENST00000518882 PLCB2Q00722 1185 aa19.77■□□□□ 0.76
PCDHGA11-202ENST00000518882 FAM173BQ6P4H8 233 aa19.77■□□□□ 0.76
PCDHGA11-202ENST00000518882 TCEANC2Q96MN5 208 aa19.77■□□□□ 0.76
PCDHGA11-202ENST00000518882 A0A0D9SFI3 127 aa19.77■□□□□ 0.75
PCDHGA11-202ENST00000518882 SLC27A2O14975 620 aa19.77■□□□□ 0.75
PCDHGA11-202ENST00000518882 KCNJ4P48050 445 aa19.77■□□□□ 0.75
PCDHGA11-202ENST00000518882 CDC37L1Q7L3B6 337 aa19.77■□□□□ 0.75
PCDHGA11-202ENST00000518882 TTC6Q86TZ1 520 aa19.77■□□□□ 0.75
PCDHGA11-202ENST00000518882 MAP7D2Q96T17 732 aa19.77■□□□□ 0.75
PCDHGA11-202ENST00000518882 NPHP4O75161 1426 aaPredicted RBP19.76■□□□□ 0.75
PCDHGA11-202ENST00000518882 GRM8O00222 908 aa19.76■□□□□ 0.75
PCDHGA11-202ENST00000518882 FERMT3Q86UX7 667 aa19.76■□□□□ 0.75
PCDHGA11-202ENST00000518882 LARP1BQ659C4 914 aaKnown RBP19.76■□□□□ 0.75
PCDHGA11-202ENST00000518882 MYRIPQ8NFW9 859 aa19.76■□□□□ 0.75
PCDHGA11-202ENST00000518882 ADGRL3Q9HAR2 1447 aa19.75■□□□□ 0.75
PCDHGA11-202ENST00000518882 LINS1Q8NG48 757 aa19.75■□□□□ 0.75
PCDHGA11-202ENST00000518882 SNRKQ9NRH2 765 aa19.75■□□□□ 0.75
PCDHGA11-202ENST00000518882 C1orf141Q5JVX7 400 aa19.74■□□□□ 0.75
PCDHGA11-202ENST00000518882 SIL1Q9H173 461 aa19.74■□□□□ 0.75
PCDHGA11-202ENST00000518882 BOLA2Q9H3K6 86 aa19.74■□□□□ 0.75
PCDHGA11-202ENST00000518882 UTYO14607 1347 aa19.74■□□□□ 0.75
PCDHGA11-202ENST00000518882 NCAPD2Q15021 1401 aa19.74■□□□□ 0.75
PCDHGA11-202ENST00000518882 AIMP1Q12904 312 aaKnown RBP19.74■□□□□ 0.75
PCDHGA11-202ENST00000518882 AMOTQ4VCS5 1084 aa19.74■□□□□ 0.75
PCDHGA11-202ENST00000518882 KLHDC4Q8TBB5 520 aa19.74■□□□□ 0.75
PCDHGA11-202ENST00000518882 SPTLC3Q9NUV7 552 aa19.74■□□□□ 0.75
PCDHGA11-202ENST00000518882 CHMP3Q9Y3E7 222 aa19.74■□□□□ 0.75
PCDHGA11-202ENST00000518882 LIG1P18858 919 aa19.73■□□□□ 0.75
PCDHGA11-202ENST00000518882 PSME1Q06323 249 aa19.73■□□□□ 0.75
PCDHGA11-202ENST00000518882 G3BP1Q13283 466 aaKnown RBP eCLIP19.73■□□□□ 0.75
PCDHGA11-202ENST00000518882 KCNH5Q8NCM2 988 aa19.73■□□□□ 0.75
PCDHGA11-202ENST00000518882 KCNF1Q9H3M0 494 aa19.73■□□□□ 0.75
PCDHGA11-202ENST00000518882 ZNF589Q86UQ0 364 aaPredicted RBP19.73■□□□□ 0.75
PCDHGA11-202ENST00000518882 TSC1Q92574 1164 aa19.73■□□□□ 0.75
PCDHGA11-202ENST00000518882 MED23Q9ULK4 1368 aa19.73■□□□□ 0.75
PCDHGA11-202ENST00000518882 HIP1O00291 1037 aa19.72■□□□□ 0.75
PCDHGA11-202ENST00000518882 TOB2Q14106 344 aaPredicted RBP19.72■□□□□ 0.75
PCDHGA11-202ENST00000518882 PDIA6Q15084 440 aa19.72■□□□□ 0.75
PCDHGA11-202ENST00000518882 ESCO1Q5FWF5 840 aa19.72■□□□□ 0.75
PCDHGA11-202ENST00000518882 ARID3AQ99856 593 aa19.72■□□□□ 0.75
PCDHGA11-202ENST00000518882 FSD1Q9BTV5 496 aa19.72■□□□□ 0.75
PCDHGA11-202ENST00000518882 OVOS2A0A0G2JMS6 1433 aa19.72■□□□□ 0.75
PCDHGA11-202ENST00000518882 IGKV5-2P06315 115 aa19.72■□□□□ 0.75
PCDHGA11-202ENST00000518882 PSMA5P28066 241 aa19.72■□□□□ 0.75
PCDHGA11-202ENST00000518882 KRT85P78386 507 aa19.72■□□□□ 0.75
PCDHGA11-202ENST00000518882 KLHL34Q8N239 644 aa19.72■□□□□ 0.75
PCDHGA11-202ENST00000518882 CCDC192P0DO97 292 aa19.71■□□□□ 0.75
PCDHGA11-202ENST00000518882 CAMK4Q16566 473 aa19.71■□□□□ 0.75
PCDHGA11-202ENST00000518882 BLOC1S2Q6QNY1 142 aa19.71■□□□□ 0.75
PCDHGA11-202ENST00000518882 HDAC5Q9UQL6 1122 aa19.71■□□□□ 0.75
PCDHGA11-202ENST00000518882 C5P01031 1676 aa19.71■□□□□ 0.75
PCDHGA11-202ENST00000518882 RPS6KB1P23443 525 aa19.71■□□□□ 0.75
PCDHGA11-202ENST00000518882 EDC3Q96F86 508 aaKnown RBP19.71■□□□□ 0.75
PCDHGA11-202ENST00000518882 PRIMPOLQ96LW4 560 aa19.71■□□□□ 0.75
PCDHGA11-202ENST00000518882 PYCARDQ9ULZ3 195 aa19.71■□□□□ 0.75
PCDHGA11-202ENST00000518882 SPC24Q8NBT2 197 aa19.7■□□□□ 0.74
PCDHGA11-202ENST00000518882 DDX21Q9NR30 783 aaKnown RBP eCLIP19.7■□□□□ 0.74
PCDHGA11-202ENST00000518882 JCADQ9P266 1359 aa19.7■□□□□ 0.74
PCDHGA11-202ENST00000518882 ELP1O95163 1332 aa19.69■□□□□ 0.74
PCDHGA11-202ENST00000518882 GCP02774 474 aa19.69■□□□□ 0.74
PCDHGA11-202ENST00000518882 LARP1Q6PKG0 1096 aaKnown RBP19.69■□□□□ 0.74
PCDHGA11-202ENST00000518882 ARHGEF25Q86VW2 580 aa19.69■□□□□ 0.74
PCDHGA11-202ENST00000518882 MRVI1Q9Y6F6 885 aa19.69■□□□□ 0.74
PCDHGA11-202ENST00000518882 STK3Q13188 491 aa19.69■□□□□ 0.74
PCDHGA11-202ENST00000518882 KIAA1524Q8TCG1 905 aa19.69■□□□□ 0.74
PCDHGA11-202ENST00000518882 ANKRD24Q8TF21 1146 aa19.69■□□□□ 0.74
PCDHGA11-202ENST00000518882 NUP62CLQ9H1M0 184 aa19.69■□□□□ 0.74
PCDHGA11-202ENST00000518882 RGPD5Q99666 1765 aa19.69■□□□□ 0.74
PCDHGA11-202ENST00000518882 MRC1P22897 1456 aa19.68■□□□□ 0.74
PCDHGA11-202ENST00000518882 MAP3K11Q16584 847 aa19.68■□□□□ 0.74
PCDHGA11-202ENST00000518882 EPHA10Q5JZY3 1008 aa19.68■□□□□ 0.74
PCDHGA11-202ENST00000518882 MTERF4Q7Z6M4 381 aaKnown RBP19.68■□□□□ 0.74
PCDHGA11-202ENST00000518882 TFIP11Q9UBB9 837 aaKnown RBP19.68■□□□□ 0.74
PCDHGA11-202ENST00000518882 COL15A1P39059 1388 aa19.68■□□□□ 0.74
PCDHGA11-202ENST00000518882 ADAMTS7Q9UKP4 1686 aa19.68■□□□□ 0.74
PCDHGA11-202ENST00000518882 CAMTA1Q9Y6Y1 1673 aa19.68■□□□□ 0.74
PCDHGA11-202ENST00000518882 DDX58O95786 925 aaKnown RBP19.68■□□□□ 0.74
PCDHGA11-202ENST00000518882 HMGN5P82970 282 aaKnown RBP19.68■□□□□ 0.74
PCDHGA11-202ENST00000518882 TYRO3Q06418 890 aa19.68■□□□□ 0.74
PCDHGA11-202ENST00000518882 RNF20Q5VTR2 975 aa19.68■□□□□ 0.74
PCDHGA11-202ENST00000518882 ZNF710Q8N1W2 664 aa19.68■□□□□ 0.74
PCDHGA11-202ENST00000518882 PDCP20941 246 aa19.67■□□□□ 0.74
PCDHGA11-202ENST00000518882 GTF2F1P35269 517 aaKnown RBP eCLIP19.67■□□□□ 0.74
PCDHGA11-202ENST00000518882 ANKRD1Q15327 319 aa19.67■□□□□ 0.74
PCDHGA11-202ENST00000518882 CKAP2LQ8IYA6 745 aa19.67■□□□□ 0.74
PCDHGA11-202ENST00000518882 FAM200AQ8TCP9 573 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms