RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 PRPF40BQ6NWY9 871 aaKnown RBP17.2■□□□□ 0.34
VEGFA-219ENST00000518824 OLFM4Q6UX06 510 aa17.2■□□□□ 0.34
VEGFA-219ENST00000518824 MIER1Q8N108 512 aa17.2■□□□□ 0.34
VEGFA-219ENST00000518824 MASTLQ96GX5 879 aa17.2■□□□□ 0.34
VEGFA-219ENST00000518824 NYXQ9GZU5 481 aa17.2■□□□□ 0.34
VEGFA-219ENST00000518824 CCDC88AQ3V6T2 1871 aa17.2■□□□□ 0.34
VEGFA-219ENST00000518824 CCER2I3L3R5 266 aa17.19■□□□□ 0.34
VEGFA-219ENST00000518824 PARP10Q53GL7 1025 aa17.19■□□□□ 0.34
VEGFA-219ENST00000518824 CCDC30Q5VVM6 783 aa17.19■□□□□ 0.34
VEGFA-219ENST00000518824 C9orf131Q5VYM1 1079 aa17.19■□□□□ 0.34
VEGFA-219ENST00000518824 ZNF526Q8TF50 670 aaPredicted RBP17.19■□□□□ 0.34
VEGFA-219ENST00000518824 ISCA1Q9BUE6 129 aa17.19■□□□□ 0.34
VEGFA-219ENST00000518824 PDZRN3Q9UPQ7 1066 aa17.19■□□□□ 0.34
VEGFA-219ENST00000518824 LAMB2P55268 1798 aa17.19■□□□□ 0.34
VEGFA-219ENST00000518824 FER1L6Q2WGJ9 1857 aa17.18■□□□□ 0.34
VEGFA-219ENST00000518824 VAMP4O75379 141 aa17.18■□□□□ 0.34
VEGFA-219ENST00000518824 NPR1P16066 1061 aa17.18■□□□□ 0.34
VEGFA-219ENST00000518824 DIEXFQ68CQ4 756 aaKnown RBP17.18■□□□□ 0.34
VEGFA-219ENST00000518824 PPP1R42Q7Z4L9 355 aa17.18■□□□□ 0.34
VEGFA-219ENST00000518824 C7orf43Q8WVR3 580 aa17.18■□□□□ 0.34
VEGFA-219ENST00000518824 UTP14AQ9BVJ6 771 aaKnown RBP17.18■□□□□ 0.34
VEGFA-219ENST00000518824 HCLS1P14317 486 aaPredicted RBP17.17■□□□□ 0.34
VEGFA-219ENST00000518824 CRY2Q49AN0 593 aa17.17■□□□□ 0.34
VEGFA-219ENST00000518824 HSP90AB3PQ58FF7 597 aa17.17■□□□□ 0.34
VEGFA-219ENST00000518824 CNKSR1Q969H4 720 aa17.17■□□□□ 0.34
VEGFA-219ENST00000518824 DDX60Q8IY21 1712 aaKnown RBP17.16■□□□□ 0.34
VEGFA-219ENST00000518824 RIC1Q4ADV7 1423 aa17.16■□□□□ 0.34
VEGFA-219ENST00000518824 RIC3Q7Z5B4 369 aa17.16■□□□□ 0.34
VEGFA-219ENST00000518824 RNF181Q9P0P0 153 aa17.16■□□□□ 0.34
VEGFA-219ENST00000518824 TRMT112Q9UI30 125 aaKnown RBP17.16■□□□□ 0.34
VEGFA-219ENST00000518824 TAF1P21675 1872 aa17.16■□□□□ 0.34
VEGFA-219ENST00000518824 GOLGA2Q08379 1002 aa17.15■□□□□ 0.34
VEGFA-219ENST00000518824 RTL5Q5HYW3 569 aaPredicted RBP17.15■□□□□ 0.34
VEGFA-219ENST00000518824 SLC10A5Q5PT55 438 aa17.15■□□□□ 0.34
VEGFA-219ENST00000518824 JARID2Q92833 1246 aaPredicted RBP17.15■□□□□ 0.34
VEGFA-219ENST00000518824 MYD88Q99836 296 aa17.15■□□□□ 0.34
VEGFA-219ENST00000518824 COL4A1P02462 1669 aa17.14■□□□□ 0.33
VEGFA-219ENST00000518824 SLC4A2P04920 1241 aa17.14■□□□□ 0.33
VEGFA-219ENST00000518824 FAM89AQ96GI7 184 aa17.14■□□□□ 0.33
VEGFA-219ENST00000518824 CDCA7LQ96GN5 454 aa17.14■□□□□ 0.33
VEGFA-219ENST00000518824 MAP3K2Q9Y2U5 619 aa17.13■□□□□ 0.33
VEGFA-219ENST00000518824 PI4KAP2A4QPH2 592 aa17.12■□□□□ 0.33
VEGFA-219ENST00000518824 HOXA10P31260 410 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-219ENST00000518824 PI4KAP1Q8N8J0 262 aa17.12■□□□□ 0.33
VEGFA-219ENST00000518824 RPGRQ92834 1020 aaKnown RBP17.12■□□□□ 0.33
VEGFA-219ENST00000518824 METTL22Q9BUU2 404 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-219ENST00000518824 STK31Q9BXU1 1019 aa17.12■□□□□ 0.33
VEGFA-219ENST00000518824 SH3TC1Q8TE82 1336 aa17.12■□□□□ 0.33
VEGFA-219ENST00000518824 SNED1Q8TER0 1413 aa17.12■□□□□ 0.33
VEGFA-219ENST00000518824 TIAM2Q8IVF5 1701 aa17.11■□□□□ 0.33
VEGFA-219ENST00000518824 IGKV5-2P06315 115 aa17.11■□□□□ 0.33
VEGFA-219ENST00000518824 TRIM28Q13263 835 aaKnown RBP17.11■□□□□ 0.33
VEGFA-219ENST00000518824 NLRP3Q96P20 1036 aa17.11■□□□□ 0.33
VEGFA-219ENST00000518824 MYH16Q9H6N6 1097 aa17.11■□□□□ 0.33
VEGFA-219ENST00000518824 LMNB1P20700 586 aa17.1■□□□□ 0.33
VEGFA-219ENST00000518824 ALDH1B1P30837 517 aa17.1■□□□□ 0.33
VEGFA-219ENST00000518824 KSR2Q6VAB6 950 aa17.1■□□□□ 0.33
VEGFA-219ENST00000518824 DICER1Q9UPY3 1922 aaKnown RBP17.09■□□□□ 0.33
VEGFA-219ENST00000518824 SLFN5Q08AF3 891 aa17.09■□□□□ 0.33
VEGFA-219ENST00000518824 FLIIQ13045 1269 aa17.09■□□□□ 0.33
VEGFA-219ENST00000518824 CWF19L2Q2TBE0 894 aaKnown RBP17.09■□□□□ 0.33
VEGFA-219ENST00000518824 CRAMP1Q96RY5 1269 aa17.09■□□□□ 0.33
VEGFA-219ENST00000518824 GPBP1L1Q9HC44 474 aaPredicted RBP17.09■□□□□ 0.33
VEGFA-219ENST00000518824 ABCC4O15439 1325 aa17.09■□□□□ 0.33
VEGFA-219ENST00000518824 RNF123Q5XPI4 1314 aa17.09■□□□□ 0.33
VEGFA-219ENST00000518824 CACNA1FO60840 1977 aa17.08■□□□□ 0.33
VEGFA-219ENST00000518824 LTBP3Q9NS15 1303 aa17.08■□□□□ 0.32
VEGFA-219ENST00000518824 DDX58O95786 925 aaKnown RBP17.08■□□□□ 0.32
VEGFA-219ENST00000518824 CCDC93Q567U6 631 aa17.08■□□□□ 0.32
VEGFA-219ENST00000518824 RBM17Q96I25 401 aaKnown RBP17.08■□□□□ 0.32
VEGFA-219ENST00000518824 TAOK3Q9H2K8 898 aa17.08■□□□□ 0.32
VEGFA-219ENST00000518824 NMRK2Q9NPI5 230 aa17.08■□□□□ 0.32
VEGFA-219ENST00000518824 F6X3S4 739 aa17.07■□□□□ 0.32
VEGFA-219ENST00000518824 IRS4O14654 1257 aaPredicted RBP17.07■□□□□ 0.32
VEGFA-219ENST00000518824 KIF3CO14782 793 aa17.07■□□□□ 0.32
VEGFA-219ENST00000518824 ZNF277Q9NRM2 450 aaPredicted RBP17.07■□□□□ 0.32
VEGFA-219ENST00000518824 PPEF1O14829 653 aaPredicted RBP17.06■□□□□ 0.32
VEGFA-219ENST00000518824 FKBP5Q13451 457 aaPredicted RBP17.06■□□□□ 0.32
VEGFA-219ENST00000518824 ZBTB38Q8NAP3 1195 aaPredicted RBP17.06■□□□□ 0.32
VEGFA-219ENST00000518824 CCDC191Q8NCU4 936 aa17.06■□□□□ 0.32
VEGFA-219ENST00000518824 CHMP4AQ9BY43 222 aa17.06■□□□□ 0.32
VEGFA-219ENST00000518824 CWC25Q9NXE8 425 aaPredicted RBP17.06■□□□□ 0.32
VEGFA-219ENST00000518824 COL4A5P29400 1685 aa17.06■□□□□ 0.32
VEGFA-219ENST00000518824 NEURL1BA8MQ27 555 aa17.05■□□□□ 0.32
VEGFA-219ENST00000518824 E9PSI1 815 aa17.05■□□□□ 0.32
VEGFA-219ENST00000518824 FKBP4Q02790 459 aaKnown RBP eCLIP17.05■□□□□ 0.32
VEGFA-219ENST00000518824 PCCAP05165 728 aaPredicted RBP17.04■□□□□ 0.32
VEGFA-219ENST00000518824 SF3B3Q15393 1217 aaKnown RBP17.04■□□□□ 0.32
VEGFA-219ENST00000518824 SOGA3Q5TF21 947 aa17.04■□□□□ 0.32
VEGFA-219ENST00000518824 TRMT2AQ8IZ69 625 aaKnown RBP17.04■□□□□ 0.32
VEGFA-219ENST00000518824 DNAAF4Q8WXU2 420 aa17.04■□□□□ 0.32
VEGFA-219ENST00000518824 CELF1Q92879 486 aaKnown RBP17.04■□□□□ 0.32
VEGFA-219ENST00000518824 CCDC85AQ96PX6 553 aaPredicted RBP17.04■□□□□ 0.32
VEGFA-219ENST00000518824 C1QTNF8P60827 252 aa17.03■□□□□ 0.32
VEGFA-219ENST00000518824 DDX46Q7L014 1031 aaKnown RBP17.03■□□□□ 0.32
VEGFA-219ENST00000518824 SEC31BQ9NQW1 1179 aa17.03■□□□□ 0.32
VEGFA-219ENST00000518824 GRAPQ13588 217 aa17.02■□□□□ 0.32
VEGFA-219ENST00000518824 RTKN2Q8IZC4 609 aa17.02■□□□□ 0.32
VEGFA-219ENST00000518824 GRAPLQ8TC17 118 aaPredicted RBP17.02■□□□□ 0.32
VEGFA-219ENST00000518824 RRAGCQ9HB90 399 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms