RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 CDK15Q96Q40 435 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 SLC4A9Q96Q91 983 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 PPP1R1BQ9UD71 204 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 BLMP54132 1417 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P23-201ENST00000518743 MYO5CQ9NQX4 1742 aa7.18□□□□□ -1.26
HMGB1P23-201ENST00000518743 TMEM229AB2RXF0 380 aa7.18□□□□□ -1.26
HMGB1P23-201ENST00000518743 SCNN1AP37088 669 aa7.18□□□□□ -1.26
HMGB1P23-201ENST00000518743 MYT1Q01538 1121 aa7.18□□□□□ -1.26
HMGB1P23-201ENST00000518743 PPP1R18Q6NYC8 613 aa7.18□□□□□ -1.26
HMGB1P23-201ENST00000518743 TMEM94Q12767 1356 aa7.18□□□□□ -1.26
HMGB1P23-201ENST00000518743 TNRQ92752 1358 aa7.18□□□□□ -1.26
HMGB1P23-201ENST00000518743 KIF14Q15058 1648 aa7.17□□□□□ -1.26
HMGB1P23-201ENST00000518743 NR5A1Q13285 461 aa7.17□□□□□ -1.26
HMGB1P23-201ENST00000518743 GGT6Q6P531 493 aa7.17□□□□□ -1.26
HMGB1P23-201ENST00000518743 PGPEP1Q9NXJ5 209 aa7.17□□□□□ -1.26
HMGB1P23-201ENST00000518743 UGGT1Q9NYU2 1555 aa7.16□□□□□ -1.26
HMGB1P23-201ENST00000518743 PPP1R12BO60237 982 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P23-201ENST00000518743 SCTRP47872 440 aa7.16□□□□□ -1.26
HMGB1P23-201ENST00000518743 SCNN1DP51172 638 aa7.16□□□□□ -1.26
HMGB1P23-201ENST00000518743 PSMA6P60900 246 aaKnown RBP7.16□□□□□ -1.26
HMGB1P23-201ENST00000518743 ARID5BQ14865 1188 aa7.16□□□□□ -1.26
HMGB1P23-201ENST00000518743 R3HDM1Q15032 1099 aaKnown RBP7.16□□□□□ -1.26
HMGB1P23-201ENST00000518743 CCDC116Q8IYX3 515 aa7.16□□□□□ -1.26
HMGB1P23-201ENST00000518743 TMC1Q8TDI8 760 aa7.16□□□□□ -1.26
HMGB1P23-201ENST00000518743 OSBPL3Q9H4L5 887 aa7.16□□□□□ -1.26
HMGB1P23-201ENST00000518743 MSH6P52701 1360 aa7.16□□□□□ -1.26
HMGB1P23-201ENST00000518743 ADGBQ8N7X0 1667 aa7.16□□□□□ -1.26
HMGB1P23-201ENST00000518743 FSHRP23945 695 aa7.15□□□□□ -1.26
HMGB1P23-201ENST00000518743 USP5P45974 858 aa7.15□□□□□ -1.26
HMGB1P23-201ENST00000518743 ZC3H6P61129 1189 aaKnown RBP7.15□□□□□ -1.26
HMGB1P23-201ENST00000518743 AAMPQ13685 434 aa7.15□□□□□ -1.26
HMGB1P23-201ENST00000518743 NAA30Q147X3 362 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P23-201ENST00000518743 ECM1Q16610 540 aa7.15□□□□□ -1.26
HMGB1P23-201ENST00000518743 TNS4Q8IZW8 715 aa7.15□□□□□ -1.26
HMGB1P23-201ENST00000518743 STIM2Q9P246 746 aa7.15□□□□□ -1.26
HMGB1P23-201ENST00000518743 BCL9LQ86UU0 1499 aa7.15□□□□□ -1.27
HMGB1P23-201ENST00000518743 ARHGAP5Q13017 1502 aa7.15□□□□□ -1.27
HMGB1P23-201ENST00000518743 A6NJY4 79 aa7.14□□□□□ -1.27
HMGB1P23-201ENST00000518743 RGS20O76081 388 aa7.14□□□□□ -1.27
HMGB1P23-201ENST00000518743 PRELPP51888 382 aa7.14□□□□□ -1.27
HMGB1P23-201ENST00000518743 EPHA4P54764 986 aa7.14□□□□□ -1.27
HMGB1P23-201ENST00000518743 ATP2B2Q01814 1243 aa7.14□□□□□ -1.27
HMGB1P23-201ENST00000518743 MTFR1Q15390 333 aa7.14□□□□□ -1.27
HMGB1P23-201ENST00000518743 ZC3H13Q5T200 1668 aaKnown RBP7.14□□□□□ -1.27
HMGB1P23-201ENST00000518743 TSPAN10Q9H1Z9 355 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P23-201ENST00000518743 CYLDQ9NQC7 956 aa7.14□□□□□ -1.27
HMGB1P23-201ENST00000518743 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.14□□□□□ -1.27
HMGB1P23-201ENST00000518743 SCHIP1Q9P0W5 487 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P23-201ENST00000518743 MLH3Q9UHC1 1453 aa7.14□□□□□ -1.27
HMGB1P23-201ENST00000518743 EMILIN1Q9Y6C2 1016 aa7.14□□□□□ -1.27
HMGB1P23-201ENST00000518743 CAMTA1Q9Y6Y1 1673 aa7.14□□□□□ -1.27
HMGB1P23-201ENST00000518743 CHD4Q14839 1912 aa7.13□□□□□ -1.27
HMGB1P23-201ENST00000518743 RNF223E7ERA6 249 aa7.13□□□□□ -1.27
HMGB1P23-201ENST00000518743 TREHO43280 583 aa7.13□□□□□ -1.27
HMGB1P23-201ENST00000518743 ADH1CP00326 375 aa7.13□□□□□ -1.27
HMGB1P23-201ENST00000518743 BRD2P25440 801 aaKnown RBP7.13□□□□□ -1.27
HMGB1P23-201ENST00000518743 SMTNP53814 917 aa7.13□□□□□ -1.27
HMGB1P23-201ENST00000518743 XPCQ01831 940 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P23-201ENST00000518743 PLCB3Q01970 1234 aa7.13□□□□□ -1.27
HMGB1P23-201ENST00000518743 MTMR3Q13615 1198 aa7.13□□□□□ -1.27
HMGB1P23-201ENST00000518743 SF3A1Q15459 793 aaKnown RBP7.13□□□□□ -1.27
HMGB1P23-201ENST00000518743 TMC7Q7Z402 723 aa7.13□□□□□ -1.27
HMGB1P23-201ENST00000518743 MYO19Q96H55 970 aa7.13□□□□□ -1.27
HMGB1P23-201ENST00000518743 PRKD2Q9BZL6 878 aa7.13□□□□□ -1.27
HMGB1P23-201ENST00000518743 ETNK1Q9HBU6 452 aa7.13□□□□□ -1.27
HMGB1P23-201ENST00000518743 MRS2Q9HD23 443 aa7.13□□□□□ -1.27
HMGB1P23-201ENST00000518743 TRPC5Q9UL62 973 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P23-201ENST00000518743 ATP7AQ04656 1500 aa7.12□□□□□ -1.27
HMGB1P23-201ENST00000518743 NUP153P49790 1475 aaKnown RBP7.12□□□□□ -1.27
HMGB1P23-201ENST00000518743 CDK2AP1O14519 115 aa7.12□□□□□ -1.27
HMGB1P23-201ENST00000518743 LGR5O75473 907 aa7.12□□□□□ -1.27
HMGB1P23-201ENST00000518743 ADAMTS2O95450 1211 aa7.12□□□□□ -1.27
HMGB1P23-201ENST00000518743 HMGB1P09429 215 aaKnown RBP7.12□□□□□ -1.27
HMGB1P23-201ENST00000518743 PCSK2P16519 638 aa7.12□□□□□ -1.27
HMGB1P23-201ENST00000518743 MPSTP25325 297 aa7.12□□□□□ -1.27
HMGB1P23-201ENST00000518743 FOXK2Q01167 660 aa7.12□□□□□ -1.27
HMGB1P23-201ENST00000518743 FMR1Q06787 632 aaKnown RBP eCLIP7.12□□□□□ -1.27
HMGB1P23-201ENST00000518743 RC3H1Q5TC82 1133 aaKnown RBP7.12□□□□□ -1.27
HMGB1P23-201ENST00000518743 SLC9A9Q8IVB4 645 aa7.12□□□□□ -1.27
HMGB1P23-201ENST00000518743 C2orf49Q9BVC5 232 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P23-201ENST00000518743 SERTAD1Q9UHV2 236 aa7.12□□□□□ -1.27
HMGB1P23-201ENST00000518743 USP21Q9UK80 565 aa7.12□□□□□ -1.27
HMGB1P23-201ENST00000518743 KIDINS220Q9ULH0 1771 aa7.11□□□□□ -1.27
HMGB1P23-201ENST00000518743 SCAMP3O14828 347 aaKnown RBP7.11□□□□□ -1.27
HMGB1P23-201ENST00000518743 PPEF1O14829 653 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P23-201ENST00000518743 PRPF40AO75400 957 aaKnown RBP7.11□□□□□ -1.27
HMGB1P23-201ENST00000518743 RPLP1P05386 114 aaKnown RBP7.11□□□□□ -1.27
HMGB1P23-201ENST00000518743 NEFLP07196 543 aa7.11□□□□□ -1.27
HMGB1P23-201ENST00000518743 GTF2E1P29083 439 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P23-201ENST00000518743 BAG6P46379 1132 aa7.11□□□□□ -1.27
HMGB1P23-201ENST00000518743 EIF1AXP47813 144 aaKnown RBP7.11□□□□□ -1.27
HMGB1P23-201ENST00000518743 HIRAP54198 1017 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P23-201ENST00000518743 SKOR1P84550 965 aa7.11□□□□□ -1.27
HMGB1P23-201ENST00000518743 PPP1R26Q5T8A7 1209 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P23-201ENST00000518743 SREK1Q8WXA9 508 aaKnown RBP7.11□□□□□ -1.27
HMGB1P23-201ENST00000518743 ALKBH8Q96BT7 664 aaKnown RBP7.11□□□□□ -1.27
HMGB1P23-201ENST00000518743 DRC1Q96MC2 740 aa7.11□□□□□ -1.27
HMGB1P23-201ENST00000518743 FAM13BQ9NYF5 915 aa7.11□□□□□ -1.27
HMGB1P23-201ENST00000518743 MAP3K1Q13233 1512 aa7.11□□□□□ -1.27
HMGB1P23-201ENST00000518743 RECKO95980 971 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms