RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 UBAP2LQ14157 1087 aaKnown RBP7.86□□□□□ -1.15
SQLE-202ENST00000518604 ASB16Q96NS5 453 aa7.86□□□□□ -1.15
SQLE-202ENST00000518604 CFHR5Q9BXR6 569 aa7.86□□□□□ -1.15
SQLE-202ENST00000518604 CUEDC1Q9NWM3 386 aaPredicted RBP7.86□□□□□ -1.15
SQLE-202ENST00000518604 PHF24Q9UPV7 400 aa7.86□□□□□ -1.15
SQLE-202ENST00000518604 FNDC3AQ9Y2H6 1198 aaKnown RBP7.86□□□□□ -1.15
SQLE-202ENST00000518604 EFSO43281 561 aa7.85□□□□□ -1.15
SQLE-202ENST00000518604 PDGFAP04085 211 aa7.85□□□□□ -1.15
SQLE-202ENST00000518604 THBS1P07996 1170 aa7.85□□□□□ -1.15
SQLE-202ENST00000518604 DNM1Q05193 864 aaKnown RBP7.85□□□□□ -1.15
SQLE-202ENST00000518604 DNAJC14Q6Y2X3 702 aaPredicted RBP7.85□□□□□ -1.15
SQLE-202ENST00000518604 ATCAYQ86WG3 371 aa7.85□□□□□ -1.15
SQLE-202ENST00000518604 RGL4Q8IZJ4 473 aa7.85□□□□□ -1.15
SQLE-202ENST00000518604 TTC16Q8NEE8 873 aa7.85□□□□□ -1.15
SQLE-202ENST00000518604 GPR152Q8TDT2 470 aa7.85□□□□□ -1.15
SQLE-202ENST00000518604 EDEM1Q92611 657 aa7.85□□□□□ -1.15
SQLE-202ENST00000518604 ZNF837Q96EG3 531 aaPredicted RBP7.85□□□□□ -1.15
SQLE-202ENST00000518604 BRD7Q9NPI1 651 aa7.85□□□□□ -1.15
SQLE-202ENST00000518604 NDFIP2Q9NV92 336 aa7.85□□□□□ -1.15
SQLE-202ENST00000518604 CCDC87Q9NVE4 849 aa7.85□□□□□ -1.15
SQLE-202ENST00000518604 NXF1Q9UBU9 619 aaKnown RBP7.85□□□□□ -1.15
SQLE-202ENST00000518604 RTCBQ9Y3I0 505 aaKnown RBP7.85□□□□□ -1.15
SQLE-202ENST00000518604 TNP2Q05952 138 aa7.84□□□□□ -1.15
SQLE-202ENST00000518604 SV2AQ7L0J3 742 aa7.84□□□□□ -1.15
SQLE-202ENST00000518604 GJD3Q8N144 294 aa7.84□□□□□ -1.15
SQLE-202ENST00000518604 DMRTB1Q96MA1 342 aa7.84□□□□□ -1.15
SQLE-202ENST00000518604 TRERF1Q96PN7 1200 aa7.84□□□□□ -1.15
SQLE-202ENST00000518604 EFCC1Q9HA90 598 aa7.84□□□□□ -1.15
SQLE-202ENST00000518604 ATXN7L1Q9ULK2 861 aaPredicted RBP7.84□□□□□ -1.15
SQLE-202ENST00000518604 POLIQ9UNA4 740 aa7.84□□□□□ -1.15
SQLE-202ENST00000518604 KCNH4Q9UQ05 1017 aa7.84□□□□□ -1.15
SQLE-202ENST00000518604 EGFRP00533 1210 aa7.83□□□□□ -1.16
SQLE-202ENST00000518604 COL19A1Q14993 1142 aa7.83□□□□□ -1.16
SQLE-202ENST00000518604 NUDT16Q96DE0 195 aaKnown RBP7.83□□□□□ -1.16
SQLE-202ENST00000518604 FAM129BQ96TA1 746 aa7.83□□□□□ -1.16
SQLE-202ENST00000518604 KHNYNO15037 678 aaKnown RBP7.82□□□□□ -1.16
SQLE-202ENST00000518604 BNIP3LO60238 219 aa7.82□□□□□ -1.16
SQLE-202ENST00000518604 MAPTP10636 758 aaKnown RBP7.82□□□□□ -1.16
SQLE-202ENST00000518604 XKR5Q6UX68 686 aa7.82□□□□□ -1.16
SQLE-202ENST00000518604 CMTR1Q8N1G2 835 aaKnown RBP7.82□□□□□ -1.16
SQLE-202ENST00000518604 RGS22Q8NE09 1264 aa7.82□□□□□ -1.16
SQLE-202ENST00000518604 TMC1Q8TDI8 760 aa7.82□□□□□ -1.16
SQLE-202ENST00000518604 GTPBP3Q969Y2 492 aaKnown RBP7.82□□□□□ -1.16
SQLE-202ENST00000518604 MARK1Q9P0L2 795 aa7.82□□□□□ -1.16
SQLE-202ENST00000518604 ANKRD33BA6NCL7 494 aa7.81□□□□□ -1.16
SQLE-202ENST00000518604 NEFLP07196 543 aa7.81□□□□□ -1.16
SQLE-202ENST00000518604 FAM182BQ5T319 152 aa7.81□□□□□ -1.16
SQLE-202ENST00000518604 PDE12Q6L8Q7 609 aaKnown RBP7.81□□□□□ -1.16
SQLE-202ENST00000518604 TMC7Q7Z402 723 aa7.81□□□□□ -1.16
SQLE-202ENST00000518604 VWA5B2Q8N398 1253 aa7.81□□□□□ -1.16
SQLE-202ENST00000518604 ALKBH8Q96BT7 664 aaKnown RBP7.81□□□□□ -1.16
SQLE-202ENST00000518604 KCNMB2Q9Y691 235 aa7.81□□□□□ -1.16
SQLE-202ENST00000518604 DCDC2BA2VCK2 349 aa7.8□□□□□ -1.16
SQLE-202ENST00000518604 CDC14CA4D256 554 aa7.8□□□□□ -1.16
SQLE-202ENST00000518604 SFSWAPQ12872 951 aaKnown RBP7.8□□□□□ -1.16
SQLE-202ENST00000518604 AMOTL2Q9Y2J4 779 aa7.8□□□□□ -1.16
SQLE-202ENST00000518604 UBAP1LF5GYI3 381 aa7.79□□□□□ -1.16
SQLE-202ENST00000518604 H3BM21 787 aa7.79□□□□□ -1.16
SQLE-202ENST00000518604 TREHO43280 583 aa7.79□□□□□ -1.16
SQLE-202ENST00000518604 XYLBO75191 536 aa7.79□□□□□ -1.16
SQLE-202ENST00000518604 IGHA2P01877 340 aa7.79□□□□□ -1.16
SQLE-202ENST00000518604 GRNP28799 593 aaKnown RBP7.79□□□□□ -1.16
SQLE-202ENST00000518604 CCINQ13939 588 aa7.79□□□□□ -1.16
SQLE-202ENST00000518604 C8orf34Q49A92 452 aa7.79□□□□□ -1.16
SQLE-202ENST00000518604 ABHD17AQ96GS6 310 aa7.79□□□□□ -1.16
SQLE-202ENST00000518604 GGNBP2Q9H3C7 697 aa7.79□□□□□ -1.16
SQLE-202ENST00000518604 FGFR3P22607 806 aa7.78□□□□□ -1.16
SQLE-202ENST00000518604 PLCB3Q01970 1234 aa7.78□□□□□ -1.16
SQLE-202ENST00000518604 SLC16A10Q8TF71 515 aa7.78□□□□□ -1.16
SQLE-202ENST00000518604 VSIG8P0DPA2 414 aa7.77□□□□□ -1.17
SQLE-202ENST00000518604 FGD1P98174 961 aa7.77□□□□□ -1.17
SQLE-202ENST00000518604 NEUROD1Q13562 356 aa7.77□□□□□ -1.17
SQLE-202ENST00000518604 DSC3Q14574 896 aa7.77□□□□□ -1.17
SQLE-202ENST00000518604 TRIP4Q15650 581 aaPredicted RBP7.77□□□□□ -1.17
SQLE-202ENST00000518604 NLRP13Q86W25 1043 aa7.77□□□□□ -1.17
SQLE-202ENST00000518604 NPAS4Q8IUM7 802 aa7.77□□□□□ -1.17
SQLE-202ENST00000518604 GSX2Q9BZM3 304 aa7.77□□□□□ -1.17
SQLE-202ENST00000518604 USP20Q9Y2K6 914 aa7.77□□□□□ -1.17
SQLE-202ENST00000518604 TERTO14746 1132 aaKnown RBP7.76□□□□□ -1.17
SQLE-202ENST00000518604 SPEM2Q0P670 501 aa7.76□□□□□ -1.17
SQLE-202ENST00000518604 ZNF438Q7Z4V0 828 aa7.76□□□□□ -1.17
SQLE-202ENST00000518604 ELP3Q9H9T3 547 aa7.76□□□□□ -1.17
SQLE-202ENST00000518604 STRN4Q9NRL3 753 aa7.76□□□□□ -1.17
SQLE-202ENST00000518604 GPR182O15218 404 aa7.75□□□□□ -1.17
SQLE-202ENST00000518604 FMR1Q06787 632 aaKnown RBP eCLIP7.75□□□□□ -1.17
SQLE-202ENST00000518604 PMEPA1Q969W9 287 aa7.75□□□□□ -1.17
SQLE-202ENST00000518604 NIF3L1Q9GZT8 377 aa7.75□□□□□ -1.17
SQLE-202ENST00000518604 DNAJC25Q9H1X3 360 aa7.75□□□□□ -1.17
SQLE-202ENST00000518604 NSFL1CQ9UNZ2 370 aaKnown RBP7.75□□□□□ -1.17
SQLE-202ENST00000518604 GPR25O00155 361 aa7.74□□□□□ -1.17
SQLE-202ENST00000518604 MAP3K6O95382 1288 aa7.74□□□□□ -1.17
SQLE-202ENST00000518604 CD33P20138 364 aa7.74□□□□□ -1.17
SQLE-202ENST00000518604 TTC39BQ5VTQ0 682 aaPredicted RBP7.74□□□□□ -1.17
SQLE-202ENST00000518604 SNX29Q8TEQ0 813 aa7.74□□□□□ -1.17
SQLE-202ENST00000518604 PNMA5Q96PV4 448 aa7.74□□□□□ -1.17
SQLE-202ENST00000518604 AVENQ9NQS1 362 aaPredicted RBP7.74□□□□□ -1.17
SQLE-202ENST00000518604 ABI2Q9NYB9 513 aaPredicted RBP7.74□□□□□ -1.17
SQLE-202ENST00000518604 HCN2Q9UL51 889 aa7.74□□□□□ -1.17
SQLE-202ENST00000518604 TNFRSF21O75509 655 aa7.73□□□□□ -1.17
SQLE-202ENST00000518604 SASH3O75995 380 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms