RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 PSMD1Q99460 953 aa11.05□□□□□ -0.64
CTNNA1-203ENST00000517534 NYXQ9GZU5 481 aa11.05□□□□□ -0.64
CTNNA1-203ENST00000517534 MKRN1Q9UHC7 482 aaKnown RBP11.05□□□□□ -0.64
CTNNA1-203ENST00000517534 CCDC88AQ3V6T2 1871 aa11.04□□□□□ -0.64
CTNNA1-203ENST00000517534 NEFMP07197 916 aa11.04□□□□□ -0.64
CTNNA1-203ENST00000517534 ZBTB3Q9H5J0 574 aa11.04□□□□□ -0.64
CTNNA1-203ENST00000517534 HACL1Q9UJ83 578 aa11.04□□□□□ -0.64
CTNNA1-203ENST00000517534 DICER1Q9UPY3 1922 aaKnown RBP11.03□□□□□ -0.64
CTNNA1-203ENST00000517534 NTSR2O95665 410 aa11.03□□□□□ -0.64
CTNNA1-203ENST00000517534 EPHX2P34913 555 aa11.03□□□□□ -0.64
CTNNA1-203ENST00000517534 CC2D2BQ6DHV5 1058 aa11.03□□□□□ -0.64
CTNNA1-203ENST00000517534 GIGYF2Q6Y7W6 1299 aaKnown RBP11.03□□□□□ -0.64
CTNNA1-203ENST00000517534 KIF6Q6ZMV9 814 aa11.03□□□□□ -0.64
CTNNA1-203ENST00000517534 C3orf67Q6ZVT6 689 aa11.03□□□□□ -0.64
CTNNA1-203ENST00000517534 TNS4Q8IZW8 715 aa11.03□□□□□ -0.64
CTNNA1-203ENST00000517534 ERBB4Q15303 1308 aa11.03□□□□□ -0.64
CTNNA1-203ENST00000517534 IBTKQ9P2D0 1353 aaPredicted RBP11.03□□□□□ -0.64
CTNNA1-203ENST00000517534 EAPPQ56P03 285 aaPredicted RBP11.02□□□□□ -0.65
CTNNA1-203ENST00000517534 SLC10A5Q5PT55 438 aa11.02□□□□□ -0.65
CTNNA1-203ENST00000517534 GPC2Q8N158 579 aa11.02□□□□□ -0.65
CTNNA1-203ENST00000517534 CRAMP1Q96RY5 1269 aa11.02□□□□□ -0.65
CTNNA1-203ENST00000517534 PNNQ9H307 717 aaKnown RBP11.02□□□□□ -0.65
CTNNA1-203ENST00000517534 TSPYL4Q9UJ04 414 aa11.02□□□□□ -0.65
CTNNA1-203ENST00000517534 RNF123Q5XPI4 1314 aa11.02□□□□□ -0.65
CTNNA1-203ENST00000517534 CNTNAP1P78357 1384 aa11.02□□□□□ -0.65
CTNNA1-203ENST00000517534 RIC1Q4ADV7 1423 aa11.01□□□□□ -0.65
CTNNA1-203ENST00000517534 ARFGEF2Q9Y6D5 1785 aa11.01□□□□□ -0.65
CTNNA1-203ENST00000517534 TMEM88BA6NKF7 163 aa11.01□□□□□ -0.65
CTNNA1-203ENST00000517534 PROSER3Q2NL68 480 aa11.01□□□□□ -0.65
CTNNA1-203ENST00000517534 PNMA8AQ86V59 439 aaPredicted RBP11.01□□□□□ -0.65
CTNNA1-203ENST00000517534 CNTROBQ8N137 903 aa11.01□□□□□ -0.65
CTNNA1-203ENST00000517534 RPGRQ92834 1020 aaKnown RBP11.01□□□□□ -0.65
CTNNA1-203ENST00000517534 RBM17Q96I25 401 aaKnown RBP11.01□□□□□ -0.65
CTNNA1-203ENST00000517534 ANXA1P04083 346 aa11□□□□□ -0.65
CTNNA1-203ENST00000517534 EIF2S2P20042 333 aaKnown RBP11□□□□□ -0.65
CTNNA1-203ENST00000517534 TMPOP42166 694 aaKnown RBP11□□□□□ -0.65
CTNNA1-203ENST00000517534 VEGFBP49765 207 aa11□□□□□ -0.65
CTNNA1-203ENST00000517534 RIPK4P57078 832 aa11□□□□□ -0.65
CTNNA1-203ENST00000517534 GRIPAP1Q4V328 841 aa11□□□□□ -0.65
CTNNA1-203ENST00000517534 PARP10Q53GL7 1025 aa11□□□□□ -0.65
CTNNA1-203ENST00000517534 MAP1SQ66K74 1059 aaPredicted RBP11□□□□□ -0.65
CTNNA1-203ENST00000517534 JDP2Q8WYK2 163 aa11□□□□□ -0.65
CTNNA1-203ENST00000517534 BABAM1Q9NWV8 329 aa11□□□□□ -0.65
CTNNA1-203ENST00000517534 CLEC11AQ9Y240 323 aa11□□□□□ -0.65
CTNNA1-203ENST00000517534 COL4A5P29400 1685 aa11□□□□□ -0.65
CTNNA1-203ENST00000517534 MAPK8IP3Q9UPT6 1336 aa11□□□□□ -0.65
CTNNA1-203ENST00000517534 TCERG1O14776 1098 aaKnown RBP10.99□□□□□ -0.65
CTNNA1-203ENST00000517534 PPEF1O14829 653 aaPredicted RBP10.99□□□□□ -0.65
CTNNA1-203ENST00000517534 FOXN1O15353 648 aa10.99□□□□□ -0.65
CTNNA1-203ENST00000517534 CAPN15O75808 1086 aa10.99□□□□□ -0.65
CTNNA1-203ENST00000517534 SCNN1DP51172 638 aa10.99□□□□□ -0.65
CTNNA1-203ENST00000517534 EIF6P56537 245 aaKnown RBP10.99□□□□□ -0.65
CTNNA1-203ENST00000517534 PPP1R42Q7Z4L9 355 aa10.99□□□□□ -0.65
CTNNA1-203ENST00000517534 LARGE2Q8N3Y3 721 aa10.99□□□□□ -0.65
CTNNA1-203ENST00000517534 NLRP3Q96P20 1036 aa10.99□□□□□ -0.65
CTNNA1-203ENST00000517534 UTP14AQ9BVJ6 771 aaKnown RBP10.99□□□□□ -0.65
CTNNA1-203ENST00000517534 GJA3Q9Y6H8 435 aa10.99□□□□□ -0.65
CTNNA1-203ENST00000517534 KDM3BQ7LBC6 1761 aa10.98□□□□□ -0.65
CTNNA1-203ENST00000517534 EPS15P42566 896 aa10.98□□□□□ -0.65
CTNNA1-203ENST00000517534 RALBP1Q15311 655 aa10.98□□□□□ -0.65
CTNNA1-203ENST00000517534 ATP6V0A2Q9Y487 856 aa10.98□□□□□ -0.65
CTNNA1-203ENST00000517534 RASSF10A6NK89 507 aa10.97□□□□□ -0.65
CTNNA1-203ENST00000517534 CHL1O00533 1208 aa10.97□□□□□ -0.65
CTNNA1-203ENST00000517534 KRT24Q2M2I5 525 aa10.97□□□□□ -0.65
CTNNA1-203ENST00000517534 COPS6Q7L5N1 327 aa10.97□□□□□ -0.65
CTNNA1-203ENST00000517534 NLRP10Q86W26 655 aa10.97□□□□□ -0.65
CTNNA1-203ENST00000517534 RTFDC1Q9BY42 306 aaPredicted RBP10.97□□□□□ -0.65
CTNNA1-203ENST00000517534 VPS33BQ9H267 617 aa10.97□□□□□ -0.65
CTNNA1-203ENST00000517534 DDX21Q9NR30 783 aaKnown RBP eCLIP10.97□□□□□ -0.65
CTNNA1-203ENST00000517534 WBP1LQ9NX94 342 aa10.97□□□□□ -0.65
CTNNA1-203ENST00000517534 LAMB4A4D0S4 1761 aa10.97□□□□□ -0.65
CTNNA1-203ENST00000517534 SCN4AP35499 1836 aa10.97□□□□□ -0.65
CTNNA1-203ENST00000517534 CACNA1SQ13698 1873 aa10.96□□□□□ -0.65
CTNNA1-203ENST00000517534 ADAMTSL1Q8N6G6 1762 aa10.96□□□□□ -0.65
CTNNA1-203ENST00000517534 ABCC4O15439 1325 aa10.96□□□□□ -0.65
CTNNA1-203ENST00000517534 PPIP5K2O43314 1243 aa10.96□□□□□ -0.65
CTNNA1-203ENST00000517534 BBOX1O75936 387 aa10.96□□□□□ -0.65
CTNNA1-203ENST00000517534 HCLS1P14317 486 aaPredicted RBP10.96□□□□□ -0.65
CTNNA1-203ENST00000517534 FMR1Q06787 632 aaKnown RBP eCLIP10.96□□□□□ -0.656e-12■■■■□ 20.8
CTNNA1-203ENST00000517534 TCIRG1Q13488 830 aa10.96□□□□□ -0.65
CTNNA1-203ENST00000517534 AOC3Q16853 763 aa10.96□□□□□ -0.65
CTNNA1-203ENST00000517534 DEFB115Q30KQ5 88 aa10.96□□□□□ -0.65
CTNNA1-203ENST00000517534 XAGE3Q8WTP9 111 aa10.96□□□□□ -0.65
CTNNA1-203ENST00000517534 NECTIN2Q92692 538 aa10.96□□□□□ -0.65
CTNNA1-203ENST00000517534 PRDM10Q9NQV6 1147 aa10.96□□□□□ -0.65
CTNNA1-203ENST00000517534 TRIM35Q9UPQ4 493 aa10.96□□□□□ -0.65
CTNNA1-203ENST00000517534 LMOD1P29536 600 aaPredicted RBP10.95□□□□□ -0.66
CTNNA1-203ENST00000517534 CXCL9Q07325 125 aa10.95□□□□□ -0.66
CTNNA1-203ENST00000517534 AIMP1Q12904 312 aaKnown RBP10.95□□□□□ -0.66
CTNNA1-203ENST00000517534 HSP90AB3PQ58FF7 597 aa10.95□□□□□ -0.66
CTNNA1-203ENST00000517534 USP50Q70EL3 339 aaPredicted RBP10.95□□□□□ -0.66
CTNNA1-203ENST00000517534 SP8Q8IXZ3 490 aa10.95□□□□□ -0.66
CTNNA1-203ENST00000517534 NIM1KQ8IY84 436 aa10.95□□□□□ -0.66
CTNNA1-203ENST00000517534 ZNRF3Q9ULT6 936 aa10.95□□□□□ -0.66
CTNNA1-203ENST00000517534 DLG5Q8TDM6 1919 aa10.95□□□□□ -0.66
CTNNA1-203ENST00000517534 NUP98P52948 1817 aa10.94□□□□□ -0.66
CTNNA1-203ENST00000517534 CTCFP49711 727 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-203ENST00000517534 LMOD3Q0VAK6 560 aa10.94□□□□□ -0.66
CTNNA1-203ENST00000517534 CST9Q5W186 159 aa10.94□□□□□ -0.66
CTNNA1-203ENST00000517534 CCDC146Q8IYE0 955 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms