RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 RNF181Q9P0P0 153 aa31.82■■■□□ 2.68
PVT1-204ENST00000517525 TRIM28Q13263 835 aaKnown RBP31.81■■■□□ 2.68
PVT1-204ENST00000517525 TSPYL6Q8N831 410 aa31.81■■■□□ 2.68
PVT1-204ENST00000517525 ARFGEF2Q9Y6D5 1785 aa31.81■■■□□ 2.68
PVT1-204ENST00000517525 ISCA1Q9BUE6 129 aa31.8■■■□□ 2.68
PVT1-204ENST00000517525 SLX4Q8IY92 1834 aa31.79■■■□□ 2.68
PVT1-204ENST00000517525 SBF1O95248 1867 aa31.79■■■□□ 2.68
PVT1-204ENST00000517525 PRELPP51888 382 aa31.79■■■□□ 2.68
PVT1-204ENST00000517525 RASSF7Q02833 373 aa31.79■■■□□ 2.68
PVT1-204ENST00000517525 SENP3-EIF4A1A0A087X0R7 540 aa31.78■■■□□ 2.68
PVT1-204ENST00000517525 TNRC6CQ9HCJ0 1690 aaKnown RBP31.76■■■□□ 2.68
PVT1-204ENST00000517525 ANKRD36CQ5JPF3 1778 aa31.76■■■□□ 2.68
PVT1-204ENST00000517525 TWISTNBQ3B726 338 aaPredicted RBP31.76■■■□□ 2.67
PVT1-204ENST00000517525 NLRP3Q96P20 1036 aa31.76■■■□□ 2.67
PVT1-204ENST00000517525 CRAMP1Q96RY5 1269 aa31.76■■■□□ 2.67
PVT1-204ENST00000517525 PHAXQ9H814 394 aaKnown RBP31.76■■■□□ 2.67
PVT1-204ENST00000517525 FANCIQ9NVI1 1328 aa31.75■■■□□ 2.67
PVT1-204ENST00000517525 C1QTNF8P60827 252 aa31.75■■■□□ 2.67
PVT1-204ENST00000517525 GOLGA2Q08379 1002 aa31.75■■■□□ 2.67
PVT1-204ENST00000517525 SH3TC1Q8TE82 1336 aa31.75■■■□□ 2.67
PVT1-204ENST00000517525 FER1L6Q2WGJ9 1857 aa31.74■■■□□ 2.67
PVT1-204ENST00000517525 CCDC93Q567U6 631 aa31.74■■■□□ 2.67
PVT1-204ENST00000517525 TAOK3Q9H2K8 898 aa31.74■■■□□ 2.67
PVT1-204ENST00000517525 ZNF219Q9P2Y4 722 aaPredicted RBP31.74■■■□□ 2.67
PVT1-204ENST00000517525 CCER2I3L3R5 266 aa31.73■■■□□ 2.67
PVT1-204ENST00000517525 CC2D2BQ6DHV5 1058 aa31.73■■■□□ 2.67
PVT1-204ENST00000517525 ZNF526Q8TF50 670 aaPredicted RBP31.73■■■□□ 2.67
PVT1-204ENST00000517525 RPGRQ92834 1020 aaKnown RBP31.73■■■□□ 2.67
PVT1-204ENST00000517525 TRMT112Q9UI30 125 aaKnown RBP31.73■■■□□ 2.67
PVT1-204ENST00000517525 C3orf67Q6ZVT6 689 aa31.72■■■□□ 2.67
PVT1-204ENST00000517525 RBM17Q96I25 401 aaKnown RBP31.72■■■□□ 2.67
PVT1-204ENST00000517525 SALL2Q9Y467 1007 aaPredicted RBP31.72■■■□□ 2.67
PVT1-204ENST00000517525 ZNF521Q96K83 1311 aa31.72■■■□□ 2.67
PVT1-204ENST00000517525 RIC3Q7Z5B4 369 aa31.71■■■□□ 2.67
PVT1-204ENST00000517525 RTKN2Q8IZC4 609 aa31.71■■■□□ 2.67
PVT1-204ENST00000517525 KIF3CO14782 793 aa31.7■■■□□ 2.67
PVT1-204ENST00000517525 DDX58O95786 925 aaKnown RBP31.7■■■□□ 2.67
PVT1-204ENST00000517525 GRIPAP1Q4V328 841 aa31.7■■■□□ 2.67
PVT1-204ENST00000517525 STK31Q9BXU1 1019 aa31.7■■■□□ 2.67
PVT1-204ENST00000517525 MYH16Q9H6N6 1097 aa31.69■■■□□ 2.66
PVT1-204ENST00000517525 KDM2BQ8NHM5 1336 aa31.69■■■□□ 2.66
PVT1-204ENST00000517525 SNED1Q8TER0 1413 aa31.68■■■□□ 2.66
PVT1-204ENST00000517525 SPINK5Q9NQ38 1064 aaPredicted RBP31.68■■■□□ 2.66
PVT1-204ENST00000517525 ATP5J2-PTCD1G3V325 749 aa31.67■■■□□ 2.66
PVT1-204ENST00000517525 VAMP4O75379 141 aa31.67■■■□□ 2.66
PVT1-204ENST00000517525 FKBP4Q02790 459 aaKnown RBP eCLIP31.67■■■□□ 2.66
PVT1-204ENST00000517525 SYNE4Q8N205 404 aa31.67■■■□□ 2.66
PVT1-204ENST00000517525 METTL22Q9BUU2 404 aaPredicted RBP31.67■■■□□ 2.66
PVT1-204ENST00000517525 HCLS1P14317 486 aaPredicted RBP31.65■■■□□ 2.66
PVT1-204ENST00000517525 KSR2Q6VAB6 950 aa31.65■■■□□ 2.66
PVT1-204ENST00000517525 CCDC191Q8NCU4 936 aa31.65■■■□□ 2.66
PVT1-204ENST00000517525 GLTPD2A6NH11 291 aa31.64■■■□□ 2.66
PVT1-204ENST00000517525 EXOSC9Q06265 439 aaKnown RBP31.64■■■□□ 2.66
PVT1-204ENST00000517525 PSMD1Q99460 953 aa31.64■■■□□ 2.66
PVT1-204ENST00000517525 SLC4A2P04920 1241 aa31.63■■■□□ 2.65
PVT1-204ENST00000517525 CACNA1SQ13698 1873 aa31.63■■■□□ 2.65
PVT1-204ENST00000517525 BBOX1O75936 387 aa31.62■■■□□ 2.65
PVT1-204ENST00000517525 SF3B3Q15393 1217 aaKnown RBP31.62■■■□□ 2.65
PVT1-204ENST00000517525 OLFM4Q6UX06 510 aa31.62■■■□□ 2.65
PVT1-204ENST00000517525 ZBTB38Q8NAP3 1195 aaPredicted RBP31.62■■■□□ 2.65
PVT1-204ENST00000517525 FAM89AQ96GI7 184 aa31.62■■■□□ 2.65
PVT1-204ENST00000517525 NMRK2Q9NPI5 230 aa31.62■■■□□ 2.65
PVT1-204ENST00000517525 MYD88Q99836 296 aa31.61■■■□□ 2.65
PVT1-204ENST00000517525 ABCC4O15439 1325 aa31.6■■■□□ 2.65
PVT1-204ENST00000517525 DICER1Q9UPY3 1922 aaKnown RBP31.6■■■□□ 2.65
PVT1-204ENST00000517525 PI4KAP2A4QPH2 592 aa31.6■■■□□ 2.65
PVT1-204ENST00000517525 PPEF1O14829 653 aaPredicted RBP31.6■■■□□ 2.65
PVT1-204ENST00000517525 HSP90B1P14625 803 aaKnown RBP31.6■■■□□ 2.65
PVT1-204ENST00000517525 PI4KAP1Q8N8J0 262 aa31.6■■■□□ 2.65
PVT1-204ENST00000517525 MAP3K2Q9Y2U5 619 aa31.6■■■□□ 2.65
PVT1-204ENST00000517525 ATP6V0A2Q9Y487 856 aa31.59■■■□□ 2.65
PVT1-204ENST00000517525 PCCAP05165 728 aaPredicted RBP31.58■■■□□ 2.65
PVT1-204ENST00000517525 DPY19L2Q6NUT2 758 aa31.58■■■□□ 2.65
PVT1-204ENST00000517525 DDX46Q7L014 1031 aaKnown RBP31.58■■■□□ 2.65
PVT1-204ENST00000517525 G2E3Q7L622 706 aa31.58■■■□□ 2.65
PVT1-204ENST00000517525 CWC25Q9NXE8 425 aaPredicted RBP31.58■■■□□ 2.65
PVT1-204ENST00000517525 CCDC88AQ3V6T2 1871 aa31.58■■■□□ 2.65
PVT1-204ENST00000517525 IRS4O14654 1257 aaPredicted RBP31.57■■■□□ 2.64
PVT1-204ENST00000517525 TCERG1O14776 1098 aaKnown RBP31.57■■■□□ 2.64
PVT1-204ENST00000517525 TOMM70O94826 608 aa31.57■■■□□ 2.64
PVT1-204ENST00000517525 TMC4Q7Z404 712 aa31.57■■■□□ 2.64
PVT1-204ENST00000517525 FLIIQ13045 1269 aa31.56■■■□□ 2.64
PVT1-204ENST00000517525 GRAPQ13588 217 aa31.56■■■□□ 2.64
PVT1-204ENST00000517525 SP8Q8IXZ3 490 aa31.56■■■□□ 2.64
PVT1-204ENST00000517525 GRAPLQ8TC17 118 aaPredicted RBP31.56■■■□□ 2.64
PVT1-204ENST00000517525 TIAM2Q8IVF5 1701 aa31.55■■■□□ 2.64
PVT1-204ENST00000517525 IGKV5-2P06315 115 aa31.55■■■□□ 2.64
PVT1-204ENST00000517525 ZNF277Q9NRM2 450 aaPredicted RBP31.55■■■□□ 2.64
PVT1-204ENST00000517525 CACNA1FO60840 1977 aa31.54■■■□□ 2.64
PVT1-204ENST00000517525 LAMB2P55268 1798 aa31.54■■■□□ 2.64
PVT1-204ENST00000517525 IARSP41252 1262 aaKnown RBP31.54■■■□□ 2.64
PVT1-204ENST00000517525 NEXNQ0ZGT2 675 aa31.54■■■□□ 2.64
PVT1-204ENST00000517525 DDX60Q8IY21 1712 aaKnown RBP31.53■■■□□ 2.64
PVT1-204ENST00000517525 TMX4Q9H1E5 349 aaPredicted RBP31.53■■■□□ 2.64
PVT1-204ENST00000517525 VPS33BQ9H267 617 aa31.53■■■□□ 2.64
PVT1-204ENST00000517525 RRAGCQ9HB90 399 aa31.53■■■□□ 2.64
PVT1-204ENST00000517525 E9PSI1 815 aa31.52■■■□□ 2.64
PVT1-204ENST00000517525 RBM46Q8TBY0 533 aaKnown RBP31.52■■■□□ 2.64
PVT1-204ENST00000517525 RTFDC1Q9BY42 306 aaPredicted RBP31.52■■■□□ 2.64
PVT1-204ENST00000517525 CDHR2Q9BYE9 1310 aa31.51■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms