RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 ELP1O95163 1332 aa7.98□□□□□ -1.13
CDH12-203ENST00000517378 AFDNP55196 1824 aaKnown RBP7.98□□□□□ -1.13
CDH12-203ENST00000517378 SASH1O94885 1247 aa7.97□□□□□ -1.13
CDH12-203ENST00000517378 ZKSCAN1P17029 563 aaPredicted RBP7.97□□□□□ -1.13
CDH12-203ENST00000517378 KIAA2012Q0VF49 1180 aa7.97□□□□□ -1.13
CDH12-203ENST00000517378 CREB3L3Q68CJ9 461 aa7.97□□□□□ -1.13
CDH12-203ENST00000517378 PRPF40BQ6NWY9 871 aaKnown RBP7.97□□□□□ -1.13
CDH12-203ENST00000517378 C14orf37Q86TY3 774 aa7.97□□□□□ -1.13
CDH12-203ENST00000517378 AACSQ86V21 672 aa7.97□□□□□ -1.13
CDH12-203ENST00000517378 SUCLG2Q96I99 432 aa7.97□□□□□ -1.13
CDH12-203ENST00000517378 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.97□□□□□ -1.13
CDH12-203ENST00000517378 COL18A1P39060 1754 aa7.97□□□□□ -1.13
CDH12-203ENST00000517378 DDX58O95786 925 aaKnown RBP7.97□□□□□ -1.13
CDH12-203ENST00000517378 GCP02774 474 aa7.97□□□□□ -1.13
CDH12-203ENST00000517378 CPA1P15085 419 aa7.97□□□□□ -1.13
CDH12-203ENST00000517378 PSME1Q06323 249 aa7.97□□□□□ -1.13
CDH12-203ENST00000517378 ME3Q16798 604 aa7.97□□□□□ -1.13
CDH12-203ENST00000517378 CWF19L2Q2TBE0 894 aaKnown RBP7.97□□□□□ -1.13
CDH12-203ENST00000517378 SASS6Q6UVJ0 657 aa7.97□□□□□ -1.13
CDH12-203ENST00000517378 CCDC83Q8IWF9 413 aa7.97□□□□□ -1.13
CDH12-203ENST00000517378 PA2G4Q9UQ80 394 aaKnown RBP7.97□□□□□ -1.13
CDH12-203ENST00000517378 RBM8AQ9Y5S9 174 aaKnown RBP7.97□□□□□ -1.13
CDH12-203ENST00000517378 MYH15Q9Y2K3 1946 aa7.97□□□□□ -1.13
CDH12-203ENST00000517378 KDM6AO15550 1401 aaPredicted RBP7.97□□□□□ -1.13
CDH12-203ENST00000517378 DYNC1I1O14576 645 aa7.97□□□□□ -1.13
CDH12-203ENST00000517378 SLC27A2O14975 620 aa7.97□□□□□ -1.13
CDH12-203ENST00000517378 PSMA5P28066 241 aa7.97□□□□□ -1.13
CDH12-203ENST00000517378 ANKRD1Q15327 319 aa7.97□□□□□ -1.13
CDH12-203ENST00000517378 EAF2Q96CJ1 260 aaPredicted RBP7.97□□□□□ -1.13
CDH12-203ENST00000517378 MAP7D2Q96T17 732 aa7.97□□□□□ -1.13
CDH12-203ENST00000517378 BICC1Q9H694 974 aaKnown RBP7.97□□□□□ -1.13
CDH12-203ENST00000517378 R3HCC1Q9Y3T6 440 aaKnown RBP7.97□□□□□ -1.13
CDH12-203ENST00000517378 ADAMTSL3P82987 1691 aa7.96□□□□□ -1.13
CDH12-203ENST00000517378 NMIQ13287 307 aaPredicted RBP7.96□□□□□ -1.13
CDH12-203ENST00000517378 USPL1Q5W0Q7 1092 aa7.96□□□□□ -1.13
CDH12-203ENST00000517378 ANKLE2Q86XL3 938 aa7.96□□□□□ -1.13
CDH12-203ENST00000517378 ANKRD24Q8TF21 1146 aa7.96□□□□□ -1.13
CDH12-203ENST00000517378 PIBF1Q8WXW3 757 aa7.96□□□□□ -1.13
CDH12-203ENST00000517378 HMG20BQ9P0W2 317 aa7.96□□□□□ -1.13
CDH12-203ENST00000517378 TPCN1Q9ULQ1 816 aa7.96□□□□□ -1.13
CDH12-203ENST00000517378 FIBPO43427 364 aa7.96□□□□□ -1.14
CDH12-203ENST00000517378 KDM4AO75164 1064 aa7.96□□□□□ -1.14
CDH12-203ENST00000517378 IGKV5-2P06315 115 aa7.96□□□□□ -1.14
CDH12-203ENST00000517378 DNM1Q05193 864 aaKnown RBP7.96□□□□□ -1.14
CDH12-203ENST00000517378 FOXD4L6Q3SYB3 417 aaPredicted RBP7.96□□□□□ -1.14
CDH12-203ENST00000517378 ESCO1Q5FWF5 840 aa7.96□□□□□ -1.14
CDH12-203ENST00000517378 FOXD4L3Q6VB84 417 aaPredicted RBP7.96□□□□□ -1.14
CDH12-203ENST00000517378 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.96□□□□□ -1.14
CDH12-203ENST00000517378 PRAMEF22A3QJZ6 481 aa7.95□□□□□ -1.14
CDH12-203ENST00000517378 HCLS1P14317 486 aaPredicted RBP7.95□□□□□ -1.14
CDH12-203ENST00000517378 PDCP20941 246 aa7.95□□□□□ -1.14
CDH12-203ENST00000517378 RNF20Q5VTR2 975 aa7.95□□□□□ -1.14
CDH12-203ENST00000517378 FAM227BQ96M60 508 aa7.95□□□□□ -1.14
CDH12-203ENST00000517378 SPTLC3Q9NUV7 552 aa7.95□□□□□ -1.14
CDH12-203ENST00000517378 USP25Q9UHP3 1055 aa7.95□□□□□ -1.14
CDH12-203ENST00000517378 UQCRHLA0A096LP55 91 aa7.95□□□□□ -1.14
CDH12-203ENST00000517378 A0A0D9SFI3 127 aa7.95□□□□□ -1.14
CDH12-203ENST00000517378 ADCY5O95622 1261 aa7.95□□□□□ -1.14
CDH12-203ENST00000517378 PTMAP06454 111 aaKnown RBP7.95□□□□□ -1.14
CDH12-203ENST00000517378 UQCRHP07919 91 aa7.95□□□□□ -1.14
CDH12-203ENST00000517378 RPS6KB1P23443 525 aa7.95□□□□□ -1.14
CDH12-203ENST00000517378 G3BP1Q13283 466 aaKnown RBP eCLIP7.95□□□□□ -1.14
CDH12-203ENST00000517378 LARP6Q9BRS8 491 aaKnown RBP7.95□□□□□ -1.14
CDH12-203ENST00000517378 ERBB3P21860 1342 aa7.95□□□□□ -1.14
CDH12-203ENST00000517378 NUP188Q5SRE5 1749 aa7.95□□□□□ -1.14
CDH12-203ENST00000517378 LAMA4Q16363 1823 aa7.95□□□□□ -1.14
CDH12-203ENST00000517378 NEURL1BA8MQ27 555 aa7.94□□□□□ -1.14
CDH12-203ENST00000517378 TOB2Q14106 344 aaPredicted RBP7.94□□□□□ -1.14
CDH12-203ENST00000517378 LARP1Q6PKG0 1096 aaKnown RBP7.94□□□□□ -1.14
CDH12-203ENST00000517378 LRP10Q7Z4F1 713 aa7.94□□□□□ -1.14
CDH12-203ENST00000517378 MTERF4Q7Z6M4 381 aaKnown RBP7.94□□□□□ -1.14
CDH12-203ENST00000517378 TLR7Q9NYK1 1049 aaKnown RBP7.94□□□□□ -1.14
CDH12-203ENST00000517378 SPEF2Q9C093 1822 aa7.94□□□□□ -1.14
CDH12-203ENST00000517378 GTF2F1P35269 517 aaKnown RBP eCLIP7.94□□□□□ -1.14
CDH12-203ENST00000517378 KRT85P78386 507 aa7.94□□□□□ -1.14
CDH12-203ENST00000517378 RBM43Q6ZSC3 357 aaKnown RBP7.94□□□□□ -1.14
CDH12-203ENST00000517378 PRIMPOLQ96LW4 560 aa7.94□□□□□ -1.14
CDH12-203ENST00000517378 COPRSQ9NQ92 184 aa7.94□□□□□ -1.14
CDH12-203ENST00000517378 TJP1Q07157 1748 aa7.94□□□□□ -1.14
CDH12-203ENST00000517378 TMEM94Q12767 1356 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 NPHP3Q7Z494 1330 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 TPM3P06753 285 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 ATP5JP18859 108 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 GCKRQ14397 625 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 RABL6Q3YEC7 729 aaPredicted RBP7.93□□□□□ -1.14
CDH12-203ENST00000517378 ZNF790Q6PG37 636 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 BLOC1S2Q6QNY1 142 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 CDC37L1Q7L3B6 337 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 TTC6Q86TZ1 520 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 TICAM2Q86XR7 235 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 METTL22Q9BUU2 404 aaPredicted RBP7.93□□□□□ -1.14
CDH12-203ENST00000517378 SLC52A2Q9HAB3 445 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.93□□□□□ -1.14
CDH12-203ENST00000517378 AXIN2Q9Y2T1 843 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 UBR2Q8IWV8 1755 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 CCDC192P0DO97 292 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 RFX5P48382 616 aaPredicted RBP7.93□□□□□ -1.14
CDH12-203ENST00000517378 KRT32Q14532 448 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 GIMAP6Q6P9H5 292 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 MYRIPQ8NFW9 859 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms