RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 IL1RAPL2Q9NP60 686 aa6.68□□□□□ -1.34
SCARNA20.4-201ENST00000516969 ZBTB1Q9Y2K1 713 aa6.68□□□□□ -1.34
SCARNA20.4-201ENST00000516969 BTAF1O14981 1849 aa6.68□□□□□ -1.34
SCARNA20.4-201ENST00000516969 PCCAP05165 728 aaPredicted RBP6.67□□□□□ -1.34
SCARNA20.4-201ENST00000516969 ATP6V1AP38606 617 aa6.67□□□□□ -1.34
SCARNA20.4-201ENST00000516969 CRKLP46109 303 aaKnown RBP6.67□□□□□ -1.34
SCARNA20.4-201ENST00000516969 MFAP1P55081 439 aaKnown RBP6.67□□□□□ -1.34
SCARNA20.4-201ENST00000516969 G3BP1Q13283 466 aaKnown RBP eCLIP6.67□□□□□ -1.34
SCARNA20.4-201ENST00000516969 HSP90AB3PQ58FF7 597 aa6.67□□□□□ -1.34
SCARNA20.4-201ENST00000516969 CLASRPQ8N2M8 674 aaKnown RBP6.67□□□□□ -1.34
SCARNA20.4-201ENST00000516969 ZBTB38Q8NAP3 1195 aaPredicted RBP6.67□□□□□ -1.34
SCARNA20.4-201ENST00000516969 PI4K2BQ8TCG2 481 aa6.67□□□□□ -1.34
SCARNA20.4-201ENST00000516969 CCDC87Q9NVE4 849 aa6.67□□□□□ -1.34
SCARNA20.4-201ENST00000516969 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.67□□□□□ -1.34
SCARNA20.4-201ENST00000516969 AFF2P51816 1311 aa6.67□□□□□ -1.34
SCARNA20.4-201ENST00000516969 TTC41PQ6P2S7 1318 aa6.67□□□□□ -1.34
SCARNA20.4-201ENST00000516969 NHSQ6T4R5 1651 aa6.67□□□□□ -1.34
SCARNA20.4-201ENST00000516969 PALLDQ8WX93 1383 aa6.67□□□□□ -1.34
SCARNA20.4-201ENST00000516969 TAF1LQ8IZX4 1826 aa6.66□□□□□ -1.34
SCARNA20.4-201ENST00000516969 CSF1RP07333 972 aa6.66□□□□□ -1.34
SCARNA20.4-201ENST00000516969 OS9Q13438 667 aaPredicted RBP6.66□□□□□ -1.34
SCARNA20.4-201ENST00000516969 MEX3CQ5U5Q3 659 aaKnown RBP6.66□□□□□ -1.34
SCARNA20.4-201ENST00000516969 TSHZ3Q63HK5 1081 aa6.66□□□□□ -1.34
SCARNA20.4-201ENST00000516969 LMBR1LQ6UX01 489 aa6.66□□□□□ -1.34
SCARNA20.4-201ENST00000516969 NLRP10Q86W26 655 aa6.66□□□□□ -1.34
SCARNA20.4-201ENST00000516969 DZIP3Q86Y13 1208 aaKnown RBP6.66□□□□□ -1.34
SCARNA20.4-201ENST00000516969 NUTM1Q86Y26 1132 aa6.66□□□□□ -1.34
SCARNA20.4-201ENST00000516969 ZNF34Q8IZ26 560 aa6.66□□□□□ -1.34
SCARNA20.4-201ENST00000516969 KLHDC4Q8TBB5 520 aa6.66□□□□□ -1.34
SCARNA20.4-201ENST00000516969 EAF2Q96CJ1 260 aaPredicted RBP6.66□□□□□ -1.34
SCARNA20.4-201ENST00000516969 USP26Q9BXU7 913 aa6.66□□□□□ -1.34
SCARNA20.4-201ENST00000516969 TRPC5Q9UL62 973 aaPredicted RBP6.66□□□□□ -1.34
SCARNA20.4-201ENST00000516969 LY75O60449 1722 aa6.66□□□□□ -1.34
SCARNA20.4-201ENST00000516969 CDHR2Q9BYE9 1310 aa6.66□□□□□ -1.34
SCARNA20.4-201ENST00000516969 BRWD3Q6RI45 1802 aa6.65□□□□□ -1.34
SCARNA20.4-201ENST00000516969 RGL2O15211 777 aa6.65□□□□□ -1.34
SCARNA20.4-201ENST00000516969 GLRX3O76003 335 aaKnown RBP6.65□□□□□ -1.34
SCARNA20.4-201ENST00000516969 CAMTA2O94983 1202 aa6.65□□□□□ -1.34
SCARNA20.4-201ENST00000516969 CHMLP26374 656 aa6.65□□□□□ -1.34
SCARNA20.4-201ENST00000516969 RC3H1Q5TC82 1133 aaKnown RBP6.65□□□□□ -1.34
SCARNA20.4-201ENST00000516969 PTF1AQ7RTS3 328 aa6.65□□□□□ -1.34
SCARNA20.4-201ENST00000516969 ATG9AQ7Z3C6 839 aa6.65□□□□□ -1.34
SCARNA20.4-201ENST00000516969 KIF2CQ99661 725 aa6.65□□□□□ -1.34
SCARNA20.4-201ENST00000516969 BCL11AQ9H165 835 aa6.65□□□□□ -1.34
SCARNA20.4-201ENST00000516969 QTRT2Q9H974 415 aaKnown RBP6.65□□□□□ -1.34
SCARNA20.4-201ENST00000516969 TBC1D2BQ9UPU7 963 aa6.65□□□□□ -1.34
SCARNA20.4-201ENST00000516969 ZNF330Q9Y3S2 320 aaPredicted RBP6.65□□□□□ -1.34
SCARNA20.4-201ENST00000516969 BCORQ6W2J9 1755 aa6.64□□□□□ -1.35
SCARNA20.4-201ENST00000516969 ERC2O15083 957 aa6.64□□□□□ -1.35
SCARNA20.4-201ENST00000516969 CIAO1O76071 339 aa6.64□□□□□ -1.35
SCARNA20.4-201ENST00000516969 IFIT2P09913 472 aaKnown RBP6.64□□□□□ -1.35
SCARNA20.4-201ENST00000516969 CASC1Q6TDU7 716 aa6.64□□□□□ -1.35
SCARNA20.4-201ENST00000516969 AACSQ86V21 672 aa6.64□□□□□ -1.35
SCARNA20.4-201ENST00000516969 SEPT12Q8IYM1 358 aa6.64□□□□□ -1.35
SCARNA20.4-201ENST00000516969 SYNE4Q8N205 404 aa6.64□□□□□ -1.35
SCARNA20.4-201ENST00000516969 LINC00116Q8NCU8 138 aa6.64□□□□□ -1.35
SCARNA20.4-201ENST00000516969 FAM89AQ96GI7 184 aa6.64□□□□□ -1.35
SCARNA20.4-201ENST00000516969 AK7Q96M32 723 aa6.64□□□□□ -1.35
SCARNA20.4-201ENST00000516969 SIL1Q9H173 461 aa6.64□□□□□ -1.35
SCARNA20.4-201ENST00000516969 GPR108Q9NPR9 543 aa6.64□□□□□ -1.35
SCARNA20.4-201ENST00000516969 ECHDC1Q9NTX5 307 aa6.64□□□□□ -1.35
SCARNA20.4-201ENST00000516969 FBXO3Q9UK99 471 aa6.64□□□□□ -1.35
SCARNA20.4-201ENST00000516969 UBN2Q6ZU65 1347 aa6.64□□□□□ -1.35
SCARNA20.4-201ENST00000516969 CNTNAP4Q9C0A0 1308 aa6.64□□□□□ -1.35
SCARNA20.4-201ENST00000516969 A0A0G2JS52 829 aa6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 TRIM6-TRIM34B2RNG4 842 aa6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 EYA2O00167 538 aa6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 EPB41L2O43491 1005 aaKnown RBP6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 REC8O95072 547 aa6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 GPTP24298 496 aa6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 IL15P40933 162 aaPredicted RBP6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 TFCP2Q12800 502 aa6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 BECN1Q14457 450 aa6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 TNNI3KQ59H18 835 aa6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 RTL5Q5HYW3 569 aaPredicted RBP6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 CLEC4GQ6UXB4 293 aa6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 TTLL11Q8NHH1 800 aa6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 SNX21Q969T3 373 aa6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 RILPL2Q969X0 211 aa6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 IL17RAQ96F46 866 aa6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 GPATCH3Q96I76 525 aa6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 ARXQ96QS3 562 aa6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 ESYT1Q9BSJ8 1104 aa6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 TBC1D2Q9BYX2 928 aa6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 CCDC8Q9H0W5 538 aaPredicted RBP6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 FPGT-TNNI3KV9GXZ4 949 aa6.63□□□□□ -1.35
SCARNA20.4-201ENST00000516969 LAMB2P55268 1798 aa6.62□□□□□ -1.35
SCARNA20.4-201ENST00000516969 DDX60Q8IY21 1712 aaKnown RBP6.62□□□□□ -1.35
SCARNA20.4-201ENST00000516969 IRS4O14654 1257 aaPredicted RBP6.62□□□□□ -1.35
SCARNA20.4-201ENST00000516969 PDE8AO60658 829 aa6.62□□□□□ -1.35
SCARNA20.4-201ENST00000516969 RPS6KA4O75676 772 aa6.62□□□□□ -1.35
SCARNA20.4-201ENST00000516969 ATP5JP18859 108 aa6.62□□□□□ -1.35
SCARNA20.4-201ENST00000516969 SLC4A3P48751 1232 aa6.62□□□□□ -1.35
SCARNA20.4-201ENST00000516969 CTSWP56202 376 aa6.62□□□□□ -1.35
SCARNA20.4-201ENST00000516969 MYT1Q01538 1121 aa6.62□□□□□ -1.35
SCARNA20.4-201ENST00000516969 CCDC57Q2TAC2 916 aa6.62□□□□□ -1.35
SCARNA20.4-201ENST00000516969 LRRC24Q50LG9 513 aa6.62□□□□□ -1.35
SCARNA20.4-201ENST00000516969 PARP10Q53GL7 1025 aa6.62□□□□□ -1.35
SCARNA20.4-201ENST00000516969 FAM182BQ5T319 152 aa6.62□□□□□ -1.35
SCARNA20.4-201ENST00000516969 SUSD4Q5VX71 490 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms